RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 VAMP5O95183 116 aa12.38□□□□□ -0.43
LIMK1-208ENST00000538333 FCER2P06734 321 aa12.38□□□□□ -0.43
LIMK1-208ENST00000538333 MELTFP08582 738 aa12.38□□□□□ -0.43
LIMK1-208ENST00000538333 ZNF883P0CG24 379 aa12.38□□□□□ -0.43
LIMK1-208ENST00000538333 SLC2A1P11166 492 aa12.38□□□□□ -0.43
LIMK1-208ENST00000538333 CCL1P22362 96 aa12.38□□□□□ -0.43
LIMK1-208ENST00000538333 HTR2BP41595 481 aa12.38□□□□□ -0.43
LIMK1-208ENST00000538333 TAS2R19P59542 299 aa12.38□□□□□ -0.43
LIMK1-208ENST00000538333 LSM6P62312 80 aaKnown RBP12.38□□□□□ -0.43
LIMK1-208ENST00000538333 CHAF1BQ13112 559 aa12.38□□□□□ -0.43
LIMK1-208ENST00000538333 LGALSLQ3ZCW2 172 aaPredicted RBP12.38□□□□□ -0.43
LIMK1-208ENST00000538333 FOXL2NBQ6ZUU3 175 aa12.38□□□□□ -0.43
LIMK1-208ENST00000538333 TMEM123Q8N131 208 aa12.38□□□□□ -0.43
LIMK1-208ENST00000538333 OR52B4Q8NGK2 314 aa12.38□□□□□ -0.43
LIMK1-208ENST00000538333 OR13C9Q8NGT0 318 aa12.38□□□□□ -0.43
LIMK1-208ENST00000538333 AQP3Q92482 292 aa12.38□□□□□ -0.43
LIMK1-208ENST00000538333 SGCZQ96LD1 299 aa12.38□□□□□ -0.43
LIMK1-208ENST00000538333 JSRP1Q96MG2 331 aaPredicted RBP12.38□□□□□ -0.43
LIMK1-208ENST00000538333 ZNF416Q9BWM5 594 aa12.38□□□□□ -0.43
LIMK1-208ENST00000538333 SLCO5A1Q9H2Y9 848 aa12.38□□□□□ -0.43
LIMK1-208ENST00000538333 MGAT4CQ9UBM8 478 aa12.38□□□□□ -0.43
LIMK1-208ENST00000538333 TCFL5Q9UL49 500 aa12.38□□□□□ -0.43
LIMK1-208ENST00000538333 IGHV3-15A0A0B4J1V0 119 aa12.37□□□□□ -0.43
LIMK1-208ENST00000538333 A0A0J9YW62 118 aa12.37□□□□□ -0.43
LIMK1-208ENST00000538333 CBR3O75828 277 aa12.37□□□□□ -0.43
LIMK1-208ENST00000538333 ALX3O95076 343 aa12.37□□□□□ -0.43
LIMK1-208ENST00000538333 BPNT1O95861 308 aa12.37□□□□□ -0.43
LIMK1-208ENST00000538333 TPOP07202 933 aa12.37□□□□□ -0.43
LIMK1-208ENST00000538333 NR2C1P13056 603 aa12.37□□□□□ -0.43
LIMK1-208ENST00000538333 RAB3AP20336 220 aa12.37□□□□□ -0.43
LIMK1-208ENST00000538333 CTSSP25774 331 aa12.37□□□□□ -0.43
LIMK1-208ENST00000538333 CSNK1A1P48729 337 aa12.37□□□□□ -0.43
LIMK1-208ENST00000538333 RAC1P63000 192 aa12.37□□□□□ -0.43
LIMK1-208ENST00000538333 TAF13Q15543 124 aa12.37□□□□□ -0.43
LIMK1-208ENST00000538333 TIPARPQ7Z3E1 657 aaKnown RBP12.37□□□□□ -0.43
LIMK1-208ENST00000538333 MEIOBQ8N635 442 aa12.37□□□□□ -0.43
LIMK1-208ENST00000538333 ACBD4Q8NC06 268 aa12.37□□□□□ -0.43
LIMK1-208ENST00000538333 OR8S1Q8NH09 359 aa12.37□□□□□ -0.43
LIMK1-208ENST00000538333 NABP1Q96AH0 204 aa12.37□□□□□ -0.43
LIMK1-208ENST00000538333 ZMAT3Q9HA38 289 aaKnown RBP12.37□□□□□ -0.43
LIMK1-208ENST00000538333 ZNF107Q9UII5 783 aaPredicted RBP12.37□□□□□ -0.43
LIMK1-208ENST00000538333 PADI1Q9ULC6 663 aa12.37□□□□□ -0.43
LIMK1-208ENST00000538333 SLC5A6Q9Y289 635 aa12.37□□□□□ -0.43
LIMK1-208ENST00000538333 A0A0G2JMM0 328 aa12.37□□□□□ -0.43
LIMK1-208ENST00000538333 A0A1W2PPB8 328 aa12.37□□□□□ -0.43
LIMK1-208ENST00000538333 A0A1W2PRS3 328 aa12.37□□□□□ -0.43
LIMK1-208ENST00000538333 PMS2P1A4D2B8 440 aa12.37□□□□□ -0.43
LIMK1-208ENST00000538333 TMEM235A6NFC5 223 aa12.37□□□□□ -0.43
LIMK1-208ENST00000538333 KIR3DP1A8MWS1 328 aa12.37□□□□□ -0.43
LIMK1-208ENST00000538333 OR2A4O95047 310 aa12.37□□□□□ -0.43
LIMK1-208ENST00000538333 ITGB2P05107 769 aa12.37□□□□□ -0.43
LIMK1-208ENST00000538333 VSIG8P0DPA2 414 aa12.37□□□□□ -0.43
LIMK1-208ENST00000538333 ABOP16442 354 aa12.37□□□□□ -0.43
LIMK1-208ENST00000538333 CX3CR1P49238 355 aa12.37□□□□□ -0.43
LIMK1-208ENST00000538333 PER3P56645 1201 aa12.37□□□□□ -0.43
LIMK1-208ENST00000538333 B3GALT5-AS1P59052 145 aa12.37□□□□□ -0.43
LIMK1-208ENST00000538333 CSNK2A1P68400 391 aaPredicted RBP12.37□□□□□ -0.43
LIMK1-208ENST00000538333 HYAL4Q2M3T9 481 aa12.37□□□□□ -0.43
LIMK1-208ENST00000538333 ZNF260Q3ZCT1 412 aa12.37□□□□□ -0.43
LIMK1-208ENST00000538333 ZBTB37Q5TC79 503 aa12.37□□□□□ -0.43
LIMK1-208ENST00000538333 RAB12Q6IQ22 244 aa12.37□□□□□ -0.43
LIMK1-208ENST00000538333 RNF144BQ7Z419 303 aa12.37□□□□□ -0.43
LIMK1-208ENST00000538333 ABHD12BQ7Z5M8 362 aaPredicted RBP12.37□□□□□ -0.43
LIMK1-208ENST00000538333 OR5AS1Q8N127 324 aa12.37□□□□□ -0.43
LIMK1-208ENST00000538333 ZIC4Q8N9L1 334 aa12.37□□□□□ -0.43
LIMK1-208ENST00000538333 OR9K2Q8NGE7 335 aa12.37□□□□□ -0.43
LIMK1-208ENST00000538333 OR2A7Q96R45 310 aa12.37□□□□□ -0.43
LIMK1-208ENST00000538333 GPR84Q9NQS5 396 aa12.37□□□□□ -0.43
LIMK1-208ENST00000538333 RYDENQ9NUL5 291 aaKnown RBP12.37□□□□□ -0.43
LIMK1-208ENST00000538333 FBLN5Q9UBX5 448 aa12.37□□□□□ -0.43
LIMK1-208ENST00000538333 KLK13Q9UKR3 277 aa12.37□□□□□ -0.43
LIMK1-208ENST00000538333 LOXL2Q9Y4K0 774 aa12.37□□□□□ -0.43
LIMK1-208ENST00000538333 METTL21EPA6NDL7 271 aa12.36□□□□□ -0.43
LIMK1-208ENST00000538333 CD74P04233 296 aa12.36□□□□□ -0.43
LIMK1-208ENST00000538333 GIPP09681 153 aaPredicted RBP12.36□□□□□ -0.43
LIMK1-208ENST00000538333 MSR1P21757 451 aa12.36□□□□□ -0.43
LIMK1-208ENST00000538333 GRB2P62993 217 aaKnown RBP12.36□□□□□ -0.43
LIMK1-208ENST00000538333 ENDOGQ14249 297 aaKnown RBP12.36□□□□□ -0.43
LIMK1-208ENST00000538333 H3F3CQ6NXT2 135 aa12.36□□□□□ -0.43
LIMK1-208ENST00000538333 CDH26Q8IXH8 852 aa12.36□□□□□ -0.43
LIMK1-208ENST00000538333 GALNT16Q8N428 558 aa12.36□□□□□ -0.43
LIMK1-208ENST00000538333 DTWD2Q8NBA8 298 aa12.36□□□□□ -0.43
LIMK1-208ENST00000538333 ZBTB44Q8NCP5 570 aa12.36□□□□□ -0.43
LIMK1-208ENST00000538333 RHBDD1Q8TEB9 315 aa12.36□□□□□ -0.43
LIMK1-208ENST00000538333 PIGQQ9BRB3 760 aa12.36□□□□□ -0.43
LIMK1-208ENST00000538333 NAA11Q9BSU3 229 aaPredicted RBP12.36□□□□□ -0.43
LIMK1-208ENST00000538333 SRXN1Q9BYN0 137 aa12.36□□□□□ -0.43
LIMK1-208ENST00000538333 NELFAQ9H3P2 528 aa12.36□□□□□ -0.43
LIMK1-208ENST00000538333 FOXD3Q9UJU5 478 aaPredicted RBP12.36□□□□□ -0.43
LIMK1-208ENST00000538333 DOCK10Q96BY6 2186 aa12.36□□□□□ -0.43
LIMK1-208ENST00000538333 TMEM14DPA8MWL7 114 aa12.36□□□□□ -0.43
LIMK1-208ENST00000538333 NPIPA2E9PIF3 369 aa12.36□□□□□ -0.43
LIMK1-208ENST00000538333 E9PLN8 166 aa12.36□□□□□ -0.43
LIMK1-208ENST00000538333 NPIPA3F8WFD2 350 aa12.36□□□□□ -0.43
LIMK1-208ENST00000538333 TNFSF11O14788 317 aa12.36□□□□□ -0.43
LIMK1-208ENST00000538333 TSC22D2O75157 780 aa12.36□□□□□ -0.43
LIMK1-208ENST00000538333 TOXO94900 526 aa12.36□□□□□ -0.43
LIMK1-208ENST00000538333 RAB3DO95716 219 aa12.36□□□□□ -0.43
LIMK1-208ENST00000538333 IGLV3-1P01715 115 aa12.36□□□□□ -0.43
LIMK1-208ENST00000538333 ZNF735P0CB33 412 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms