RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 CMC1Q7Z7K0 106 aa4.23□□□□□ -1.73
CLIP1-207ENST00000536634 ZNF100Q8IYN0 542 aa4.23□□□□□ -1.73
CLIP1-207ENST00000536634 UBE2J2Q8N2K1 259 aa4.23□□□□□ -1.73
CLIP1-207ENST00000536634 SLC43A2Q8N370 569 aa4.23□□□□□ -1.73
CLIP1-207ENST00000536634 ZNF786Q8N393 782 aa4.23□□□□□ -1.73
CLIP1-207ENST00000536634 OR5T2Q8NGG2 359 aa4.23□□□□□ -1.73
CLIP1-207ENST00000536634 OR52E4Q8NGH9 312 aa4.23□□□□□ -1.73
CLIP1-207ENST00000536634 STAG3L4Q8TBR4 150 aa4.23□□□□□ -1.73
CLIP1-207ENST00000536634 GPR22Q99680 433 aa4.23□□□□□ -1.73
CLIP1-207ENST00000536634 RACGAP1Q9H0H5 632 aa4.23□□□□□ -1.73
CLIP1-207ENST00000536634 TIGARQ9NQ88 270 aa4.23□□□□□ -1.73
CLIP1-207ENST00000536634 DDX28Q9NUL7 540 aaKnown RBP4.23□□□□□ -1.73
CLIP1-207ENST00000536634 TAS2R16Q9NYV7 291 aa4.23□□□□□ -1.73
CLIP1-207ENST00000536634 TAS2R9Q9NYW1 312 aa4.23□□□□□ -1.73
CLIP1-207ENST00000536634 ELF5Q9UKW6 265 aaPredicted RBP4.23□□□□□ -1.73
CLIP1-207ENST00000536634 PSME2Q9UL46 239 aa4.23□□□□□ -1.73
CLIP1-207ENST00000536634 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.23□□□□□ -1.73
CLIP1-207ENST00000536634 ACOT9Q9Y305 439 aa4.23□□□□□ -1.73
CLIP1-207ENST00000536634 TMEM129A0AVI4 362 aa4.22□□□□□ -1.73
CLIP1-207ENST00000536634 hCG_2039718K7EN88 272 aa4.22□□□□□ -1.73
CLIP1-207ENST00000536634 PDYNP01213 254 aa4.22□□□□□ -1.73
CLIP1-207ENST00000536634 STMN1P16949 149 aa4.22□□□□□ -1.73
CLIP1-207ENST00000536634 MDKP21741 143 aaPredicted RBP4.22□□□□□ -1.73
CLIP1-207ENST00000536634 IVDP26440 423 aa4.22□□□□□ -1.73
CLIP1-207ENST00000536634 ELK4P28324 431 aa4.22□□□□□ -1.73
CLIP1-207ENST00000536634 CALCRP30988 508 aa4.22□□□□□ -1.73
CLIP1-207ENST00000536634 GABRA3P34903 492 aa4.22□□□□□ -1.73
CLIP1-207ENST00000536634 KHKP50053 298 aa4.22□□□□□ -1.73
CLIP1-207ENST00000536634 ZNF117Q03924 483 aa4.22□□□□□ -1.73
CLIP1-207ENST00000536634 IFT88Q13099 833 aa4.22□□□□□ -1.73
CLIP1-207ENST00000536634 RASA2Q15283 850 aa4.22□□□□□ -1.73
CLIP1-207ENST00000536634 NDUFAF6Q330K2 333 aa4.22□□□□□ -1.73
CLIP1-207ENST00000536634 TCHHL1Q5QJ38 904 aaPredicted RBP4.22□□□□□ -1.73
CLIP1-207ENST00000536634 ZNF774Q6NX45 483 aa4.22□□□□□ -1.73
CLIP1-207ENST00000536634 LEG1Q6P5S2 330 aa4.22□□□□□ -1.73
CLIP1-207ENST00000536634 CBLN3Q6UW01 205 aa4.22□□□□□ -1.73
CLIP1-207ENST00000536634 RPS27LQ71UM5 84 aaKnown RBP4.22□□□□□ -1.73
CLIP1-207ENST00000536634 ZER1Q7Z7L7 766 aa4.22□□□□□ -1.73
CLIP1-207ENST00000536634 FAM9CQ8IZT9 166 aa4.22□□□□□ -1.73
CLIP1-207ENST00000536634 CENPLQ8N0S6 344 aaPredicted RBP4.22□□□□□ -1.73
CLIP1-207ENST00000536634 OR2L13Q8N349 312 aa4.22□□□□□ -1.73
CLIP1-207ENST00000536634 BPIFB2Q8N4F0 458 aa4.22□□□□□ -1.73
CLIP1-207ENST00000536634 SIGLECL1Q8N7X8 197 aa4.22□□□□□ -1.73
CLIP1-207ENST00000536634 OR51F2Q8NH61 342 aa4.22□□□□□ -1.73
CLIP1-207ENST00000536634 FBXO30Q8TB52 745 aa4.22□□□□□ -1.73
CLIP1-207ENST00000536634 CHPT1Q8WUD6 406 aa4.22□□□□□ -1.73
CLIP1-207ENST00000536634 LRRC58Q96CX6 371 aa4.22□□□□□ -1.73
CLIP1-207ENST00000536634 DOK1Q99704 481 aa4.22□□□□□ -1.73
CLIP1-207ENST00000536634 BAG1Q99933 345 aaPredicted RBP4.22□□□□□ -1.73
CLIP1-207ENST00000536634 FAIM2Q9BWQ8 316 aa4.22□□□□□ -1.73
CLIP1-207ENST00000536634 RAB1BQ9H0U4 201 aa4.22□□□□□ -1.73
CLIP1-207ENST00000536634 SLITRK2Q9H156 845 aa4.22□□□□□ -1.73
CLIP1-207ENST00000536634 TPK1Q9H3S4 243 aa4.22□□□□□ -1.73
CLIP1-207ENST00000536634 SLC17A5Q9NRA2 495 aa4.22□□□□□ -1.73
CLIP1-207ENST00000536634 TREM2Q9NZC2 230 aa4.22□□□□□ -1.73
CLIP1-207ENST00000536634 AHSPQ9NZD4 102 aa4.22□□□□□ -1.73
CLIP1-207ENST00000536634 SENP1Q9P0U3 644 aa4.22□□□□□ -1.73
CLIP1-207ENST00000536634 OPN4Q9UHM6 478 aa4.22□□□□□ -1.73
CLIP1-207ENST00000536634 SELENOKQ9Y6D0 94 aa4.22□□□□□ -1.73
CLIP1-207ENST00000536634 SH3PXD2BA1X283 911 aa4.21□□□□□ -1.74
CLIP1-207ENST00000536634 GJE1A6NN92 205 aa4.21□□□□□ -1.74
CLIP1-207ENST00000536634 ZNF716A6NP11 495 aa4.21□□□□□ -1.74
CLIP1-207ENST00000536634 KIF2AO00139 706 aaPredicted RBP4.21□□□□□ -1.74
CLIP1-207ENST00000536634 SRSF10O75494 262 aaKnown RBP4.21□□□□□ -1.74
CLIP1-207ENST00000536634 IGHV3-13P01766 116 aa4.21□□□□□ -1.74
CLIP1-207ENST00000536634 PRB2P02812 416 aaPredicted RBP4.21□□□□□ -1.74
CLIP1-207ENST00000536634 ADRA2AP08913 450 aa4.21□□□□□ -1.74
CLIP1-207ENST00000536634 CECR9P0C854 216 aa4.21□□□□□ -1.74
CLIP1-207ENST00000536634 GFAPP14136 432 aa4.21□□□□□ -1.74
CLIP1-207ENST00000536634 OMGP23515 440 aa4.21□□□□□ -1.74
CLIP1-207ENST00000536634 PRTN3P24158 256 aa4.21□□□□□ -1.74
CLIP1-207ENST00000536634 COL8A2P25067 703 aa4.21□□□□□ -1.74
CLIP1-207ENST00000536634 GP5P40197 560 aa4.21□□□□□ -1.74
CLIP1-207ENST00000536634 MAP3K8P41279 467 aa4.21□□□□□ -1.74
CLIP1-207ENST00000536634 EIF1P41567 113 aaKnown RBP4.21□□□□□ -1.74
CLIP1-207ENST00000536634 CCNG1P51959 295 aa4.21□□□□□ -1.74
CLIP1-207ENST00000536634 NCBP2P52298 156 aaKnown RBP eCLIP4.21□□□□□ -1.74
CLIP1-207ENST00000536634 PSMD4P55036 377 aaKnown RBP4.21□□□□□ -1.74
CLIP1-207ENST00000536634 TRA2BP62995 288 aaKnown RBP4.21□□□□□ -1.74
CLIP1-207ENST00000536634 SELENBP1Q13228 472 aa4.21□□□□□ -1.74
CLIP1-207ENST00000536634 PPP1R7Q15435 360 aa4.21□□□□□ -1.74
CLIP1-207ENST00000536634 HIKESHIQ53FT3 197 aa4.21□□□□□ -1.74
CLIP1-207ENST00000536634 CCNJQ5T5M9 372 aa4.21□□□□□ -1.74
CLIP1-207ENST00000536634 AP1ARQ63HQ0 302 aa4.21□□□□□ -1.74
CLIP1-207ENST00000536634 TTC19Q6DKK2 380 aaPredicted RBP4.21□□□□□ -1.74
CLIP1-207ENST00000536634 UGT2A3Q6UWM9 527 aa4.21□□□□□ -1.74
CLIP1-207ENST00000536634 PDIK1LQ8N165 341 aa4.21□□□□□ -1.74
CLIP1-207ENST00000536634 LSMEM1Q8N8F7 131 aa4.21□□□□□ -1.74
CLIP1-207ENST00000536634 FBXO36Q8NEA4 188 aa4.21□□□□□ -1.74
CLIP1-207ENST00000536634 OR4F6Q8NGB9 312 aa4.21□□□□□ -1.74
CLIP1-207ENST00000536634 C16orf78Q8WTQ4 265 aa4.21□□□□□ -1.74
CLIP1-207ENST00000536634 RASL10AQ92737 203 aa4.21□□□□□ -1.74
CLIP1-207ENST00000536634 YIPF5Q969M3 257 aa4.21□□□□□ -1.74
CLIP1-207ENST00000536634 APH1AQ96BI3 265 aa4.21□□□□□ -1.74
CLIP1-207ENST00000536634 DNAJA3Q96EY1 480 aa4.21□□□□□ -1.74
CLIP1-207ENST00000536634 RBBP8Q99708 897 aa4.21□□□□□ -1.74
CLIP1-207ENST00000536634 SH3GL3Q99963 347 aa4.21□□□□□ -1.74
CLIP1-207ENST00000536634 EBPLQ9BY08 206 aa4.21□□□□□ -1.74
CLIP1-207ENST00000536634 GLIPR2Q9H4G4 154 aa4.21□□□□□ -1.74
CLIP1-207ENST00000536634 ELOVL6Q9H5J4 265 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms