RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 IGFBP4P22692 258 aa14.25□□□□□ -0.13
CHMP1A-202ENST00000535997 ZBTB25P24278 435 aa14.25□□□□□ -0.13
CHMP1A-202ENST00000535997 EIF1AXP47813 144 aaKnown RBP14.25□□□□□ -0.13
CHMP1A-202ENST00000535997 NKPD1Q17RQ9 610 aa14.25□□□□□ -0.13
CHMP1A-202ENST00000535997 SMUG1Q53HV7 270 aa14.25□□□□□ -0.13
CHMP1A-202ENST00000535997 HSD17B13Q7Z5P4 300 aaPredicted RBP14.25□□□□□ -0.13
CHMP1A-202ENST00000535997 UEVLDQ8IX04 471 aa14.25□□□□□ -0.13
CHMP1A-202ENST00000535997 ADPRHL1Q8NDY3 354 aa14.25□□□□□ -0.13
CHMP1A-202ENST00000535997 LINC00052Q96N35 136 aa14.25□□□□□ -0.13
CHMP1A-202ENST00000535997 WDR77Q9BQA1 342 aaPredicted RBP14.25□□□□□ -0.13
CHMP1A-202ENST00000535997 C1QTNF6Q9BXI9 259 aa14.25□□□□□ -0.13
CHMP1A-202ENST00000535997 SLC25A32Q9H2D1 315 aa14.25□□□□□ -0.13
CHMP1A-202ENST00000535997 ZNF230Q9UIE0 474 aaPredicted RBP14.25□□□□□ -0.13
CHMP1A-202ENST00000535997 FBXO4Q9UKT5 387 aa14.25□□□□□ -0.13
CHMP1A-202ENST00000535997 VSIG4Q9Y279 399 aa14.25□□□□□ -0.13
CHMP1A-202ENST00000535997 NOP16Q9Y3C1 178 aaKnown RBP14.25□□□□□ -0.13
CHMP1A-202ENST00000535997 SLC25A4P12235 298 aa14.24□□□□□ -0.13
CHMP1A-202ENST00000535997 TBPP20226 339 aa14.24□□□□□ -0.13
CHMP1A-202ENST00000535997 EMP2P54851 167 aa14.24□□□□□ -0.13
CHMP1A-202ENST00000535997 DCDP81605 110 aaKnown RBP14.24□□□□□ -0.13
CHMP1A-202ENST00000535997 ZNF345Q14585 488 aa14.24□□□□□ -0.13
CHMP1A-202ENST00000535997 PLPPR5Q32ZL2 321 aa14.24□□□□□ -0.13
CHMP1A-202ENST00000535997 ZNF574Q6ZN55 896 aaPredicted RBP14.24□□□□□ -0.13
CHMP1A-202ENST00000535997 OVCH2Q7RTZ1 564 aa14.24□□□□□ -0.13
CHMP1A-202ENST00000535997 LYG2Q86SG7 212 aa14.24□□□□□ -0.13
CHMP1A-202ENST00000535997 OR1S1Q8NH92 325 aa14.24□□□□□ -0.13
CHMP1A-202ENST00000535997 FOXQ1Q9C009 403 aa14.24□□□□□ -0.13
CHMP1A-202ENST00000535997 MOB1AQ9H8S9 216 aa14.24□□□□□ -0.13
CHMP1A-202ENST00000535997 COMMD9Q9P000 198 aa14.24□□□□□ -0.13
CHMP1A-202ENST00000535997 SHISA8B8ZZ34 492 aa14.24□□□□□ -0.13
CHMP1A-202ENST00000535997 BET1O15155 118 aa14.24□□□□□ -0.13
CHMP1A-202ENST00000535997 ZFAND5O76080 213 aa14.24□□□□□ -0.13
CHMP1A-202ENST00000535997 OR2F2O95006 317 aa14.24□□□□□ -0.13
CHMP1A-202ENST00000535997 SPDEFO95238 335 aa14.24□□□□□ -0.13
CHMP1A-202ENST00000535997 IL2RAP01589 272 aa14.24□□□□□ -0.13
CHMP1A-202ENST00000535997 IGHG1P01857 330 aa14.24□□□□□ -0.13
CHMP1A-202ENST00000535997 CSN2P05814 226 aa14.24□□□□□ -0.13
CHMP1A-202ENST00000535997 CHRM2P08172 466 aa14.24□□□□□ -0.13
CHMP1A-202ENST00000535997 ZNF93P35789 620 aaPredicted RBP14.24□□□□□ -0.13
CHMP1A-202ENST00000535997 CLRN1P58418 232 aa14.24□□□□□ -0.13
CHMP1A-202ENST00000535997 OR2F1Q13607 317 aa14.24□□□□□ -0.13
CHMP1A-202ENST00000535997 C11orf87Q6NUJ2 197 aa14.24□□□□□ -0.13
CHMP1A-202ENST00000535997 C3orf33Q6P1S2 294 aa14.24□□□□□ -0.13
CHMP1A-202ENST00000535997 ANGPTL5Q86XS5 388 aa14.24□□□□□ -0.13
CHMP1A-202ENST00000535997 OR2AJ1Q8NGZ0 328 aa14.24□□□□□ -0.13
CHMP1A-202ENST00000535997 MITD1Q8WV92 249 aa14.24□□□□□ -0.13
CHMP1A-202ENST00000535997 CMBLQ96DG6 245 aa14.24□□□□□ -0.13
CHMP1A-202ENST00000535997 SHARPINQ9H0F6 387 aa14.24□□□□□ -0.13
CHMP1A-202ENST00000535997 MYOTQ9UBF9 498 aa14.24□□□□□ -0.13
CHMP1A-202ENST00000535997 TMEM14DPA8MWL7 114 aa14.23□□□□□ -0.13
CHMP1A-202ENST00000535997 ZNF878C9JN71 531 aa14.23□□□□□ -0.13
CHMP1A-202ENST00000535997 HPP00738 406 aa14.23□□□□□ -0.13
CHMP1A-202ENST00000535997 UBBP0CG47 229 aa14.23□□□□□ -0.13
CHMP1A-202ENST00000535997 PGA4P0DJD7 388 aa14.23□□□□□ -0.13
CHMP1A-202ENST00000535997 PGA3P0DJD8 388 aa14.23□□□□□ -0.13
CHMP1A-202ENST00000535997 BCKDHBP21953 392 aa14.23□□□□□ -0.13
CHMP1A-202ENST00000535997 HOXD11P31277 338 aaPredicted RBP14.23□□□□□ -0.13
CHMP1A-202ENST00000535997 RPS27AP62979 156 aaKnown RBP14.23□□□□□ -0.13
CHMP1A-202ENST00000535997 UBA52P62987 128 aaKnown RBP14.23□□□□□ -0.13
CHMP1A-202ENST00000535997 C17orf107Q6ZR85 190 aa14.23□□□□□ -0.13
CHMP1A-202ENST00000535997 TMPRSS9Q7Z410 1059 aa14.23□□□□□ -0.13
CHMP1A-202ENST00000535997 KCNRGQ8N5I3 272 aa14.23□□□□□ -0.13
CHMP1A-202ENST00000535997 GVQW1Q8N7I0 195 aa14.23□□□□□ -0.13
CHMP1A-202ENST00000535997 BVESQ8NE79 360 aa14.23□□□□□ -0.13
CHMP1A-202ENST00000535997 OR10R2Q8NGX6 335 aa14.23□□□□□ -0.13
CHMP1A-202ENST00000535997 POC1BQ8TC44 478 aa14.23□□□□□ -0.13
CHMP1A-202ENST00000535997 OR6C1Q96RD1 312 aa14.23□□□□□ -0.13
CHMP1A-202ENST00000535997 PDCD10Q9BUL8 212 aa14.23□□□□□ -0.13
CHMP1A-202ENST00000535997 LHFPL6Q9Y693 200 aa14.23□□□□□ -0.13
CHMP1A-202ENST00000535997 A0A1B0GW55 424 aa14.22□□□□□ -0.13
CHMP1A-202ENST00000535997 STK17BO94768 372 aa14.22□□□□□ -0.13
CHMP1A-202ENST00000535997 RLN2P04090 185 aa14.22□□□□□ -0.13
CHMP1A-202ENST00000535997 DUX4L2P0CJ85 424 aa14.22□□□□□ -0.13
CHMP1A-202ENST00000535997 DUX4L3P0CJ86 424 aa14.22□□□□□ -0.13
CHMP1A-202ENST00000535997 DUX4L4P0CJ87 422 aa14.22□□□□□ -0.13
CHMP1A-202ENST00000535997 DUX4L5P0CJ88 424 aa14.22□□□□□ -0.13
CHMP1A-202ENST00000535997 DUX4L6P0CJ89 424 aa14.22□□□□□ -0.13
CHMP1A-202ENST00000535997 DUX4L7P0CJ90 424 aa14.22□□□□□ -0.13
CHMP1A-202ENST00000535997 PTGDSP41222 190 aa14.22□□□□□ -0.13
CHMP1A-202ENST00000535997 IL13RA1P78552 427 aa14.22□□□□□ -0.13
CHMP1A-202ENST00000535997 TAF13Q15543 124 aa14.22□□□□□ -0.13
CHMP1A-202ENST00000535997 CFAP77Q6ZQR2 320 aa14.22□□□□□ -0.13
CHMP1A-202ENST00000535997 CPEB2Q7Z5Q1 589 aaKnown RBP14.22□□□□□ -0.13
CHMP1A-202ENST00000535997 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.22□□□□□ -0.13
CHMP1A-202ENST00000535997 OR13C9Q8NGT0 318 aa14.22□□□□□ -0.13
CHMP1A-202ENST00000535997 OR51E1Q8TCB6 317 aa14.22□□□□□ -0.13
CHMP1A-202ENST00000535997 ST8SIA2Q92186 375 aa14.22□□□□□ -0.13
CHMP1A-202ENST00000535997 MRGPRFQ96AM1 343 aa14.22□□□□□ -0.13
CHMP1A-202ENST00000535997 DMRTA2Q96SC8 542 aa14.22□□□□□ -0.13
CHMP1A-202ENST00000535997 PHB2Q99623 299 aa14.22□□□□□ -0.13
CHMP1A-202ENST00000535997 SELENOIQ9C0D9 397 aa14.22□□□□□ -0.13
CHMP1A-202ENST00000535997 CST11Q9H112 138 aa14.22□□□□□ -0.13
CHMP1A-202ENST00000535997 METTL7AQ9H8H3 244 aa14.22□□□□□ -0.13
CHMP1A-202ENST00000535997 SEC61A2Q9H9S3 476 aa14.22□□□□□ -0.13
CHMP1A-202ENST00000535997 DUX4Q9UBX2 424 aa14.22□□□□□ -0.13
CHMP1A-202ENST00000535997 GLS2Q9UI32 602 aa14.22□□□□□ -0.13
CHMP1A-202ENST00000535997 TNFSF18Q9UNG2 199 aa14.22□□□□□ -0.13
CHMP1A-202ENST00000535997 WIF1Q9Y5W5 379 aa14.22□□□□□ -0.13
CHMP1A-202ENST00000535997 C9orf170A2RU37 121 aa14.22□□□□□ -0.13
CHMP1A-202ENST00000535997 D6RAR5 112 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms