RNA–Protein interactions for RNA: ENST00000535607.5

USP28-202, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 683 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-202ENST00000535607 EGR1P18146 543 aa5.88□□□□□ -1.47
USP28-202ENST00000535607 AGAP20933 346 aa5.88□□□□□ -1.47
USP28-202ENST00000535607 TBXA2RP21731 343 aa5.88□□□□□ -1.47
USP28-202ENST00000535607 HIST1H1TP22492 207 aaPredicted RBP5.88□□□□□ -1.47
USP28-202ENST00000535607 CD70P32970 193 aa5.88□□□□□ -1.47
USP28-202ENST00000535607 RPL4P36578 427 aaKnown RBP5.88□□□□□ -1.47
USP28-202ENST00000535607 FOLR3P41439 243 aa5.88□□□□□ -1.47
USP28-202ENST00000535607 GPR1P46091 355 aa5.88□□□□□ -1.47
USP28-202ENST00000535607 ARRB1P49407 418 aaPredicted RBP5.88□□□□□ -1.47
USP28-202ENST00000535607 PPM1FP49593 454 aaPredicted RBP5.88□□□□□ -1.47
USP28-202ENST00000535607 ARHGDIBP52566 201 aa5.88□□□□□ -1.47
USP28-202ENST00000535607 PRPS1P60891 318 aa5.88□□□□□ -1.47
USP28-202ENST00000535607 SUMO2P61956 95 aaKnown RBP5.88□□□□□ -1.47
USP28-202ENST00000535607 RPS11P62280 158 aaKnown RBP eCLIP5.88□□□□□ -1.47
USP28-202ENST00000535607 EEF1A1P68104 462 aaKnown RBP5.88□□□□□ -1.47
USP28-202ENST00000535607 OC90Q02509 493 aaPredicted RBP5.88□□□□□ -1.47
USP28-202ENST00000535607 FABP9Q0Z7S8 132 aa5.88□□□□□ -1.47
USP28-202ENST00000535607 FUT5Q11128 374 aa5.88□□□□□ -1.47
USP28-202ENST00000535607 ALKBH1Q13686 389 aaKnown RBP5.88□□□□□ -1.47
USP28-202ENST00000535607 KLHL26Q53HC5 615 aa5.88□□□□□ -1.47
USP28-202ENST00000535607 ACTBL2Q562R1 376 aa5.88□□□□□ -1.47
USP28-202ENST00000535607 RNASE10Q5GAN6 216 aaKnown RBP5.88□□□□□ -1.47
USP28-202ENST00000535607 MFSD12Q6NUT3 480 aa5.88□□□□□ -1.47
USP28-202ENST00000535607 ZNF836Q6ZNA1 936 aa5.88□□□□□ -1.47
USP28-202ENST00000535607 RHOUQ7L0Q8 258 aa5.88□□□□□ -1.47
USP28-202ENST00000535607 SLC16A13Q7RTY0 426 aa5.88□□□□□ -1.47
USP28-202ENST00000535607 SLC16A9Q7RTY1 509 aa5.88□□□□□ -1.47
USP28-202ENST00000535607 ZNF550Q7Z398 422 aa5.88□□□□□ -1.47
USP28-202ENST00000535607 ADIPOR2Q86V24 386 aa5.88□□□□□ -1.47
USP28-202ENST00000535607 SLC25A42Q86VD7 318 aa5.88□□□□□ -1.47
USP28-202ENST00000535607 COMTD1Q86VU5 262 aa5.88□□□□□ -1.47
USP28-202ENST00000535607 MMP21Q8N119 569 aa5.88□□□□□ -1.47
USP28-202ENST00000535607 ZFP82Q8N141 532 aa5.88□□□□□ -1.47
USP28-202ENST00000535607 OR2L13Q8N349 312 aa5.88□□□□□ -1.47
USP28-202ENST00000535607 KDM8Q8N371 416 aa5.88□□□□□ -1.47
USP28-202ENST00000535607 LRRC25Q8N386 305 aaPredicted RBP5.88□□□□□ -1.47
USP28-202ENST00000535607 ZNF676Q8N7Q3 588 aa5.88□□□□□ -1.47
USP28-202ENST00000535607 ZNF740Q8NDX6 193 aa5.88□□□□□ -1.47
USP28-202ENST00000535607 OR2L5Q8NG80 312 aa5.88□□□□□ -1.47
USP28-202ENST00000535607 OR5AP2Q8NGF4 316 aa5.88□□□□□ -1.47
USP28-202ENST00000535607 OR52E2Q8NGJ4 325 aa5.88□□□□□ -1.47
USP28-202ENST00000535607 OR13C5Q8NGS8 318 aa5.88□□□□□ -1.47
USP28-202ENST00000535607 OR13C2Q8NGS9 318 aa5.88□□□□□ -1.47
USP28-202ENST00000535607 MITD1Q8WV92 249 aa5.88□□□□□ -1.47
USP28-202ENST00000535607 PPP1R1CQ8WVI7 109 aa5.88□□□□□ -1.47
USP28-202ENST00000535607 DCUN1D4Q92564 292 aa5.88□□□□□ -1.47
USP28-202ENST00000535607 PTX4Q96A99 478 aa5.88□□□□□ -1.47
USP28-202ENST00000535607 ADAD1Q96M93 576 aaKnown RBP5.88□□□□□ -1.47
USP28-202ENST00000535607 WFDC6Q9BQY6 131 aa5.88□□□□□ -1.47
USP28-202ENST00000535607 SULT4A1Q9BR01 284 aa5.88□□□□□ -1.47
USP28-202ENST00000535607 SLC25A18Q9H1K4 315 aa5.88□□□□□ -1.47
USP28-202ENST00000535607 TLNRD1Q9H1K6 362 aa5.88□□□□□ -1.47
USP28-202ENST00000535607 SYT4Q9H2B2 425 aa5.88□□□□□ -1.47
USP28-202ENST00000535607 SMDT1Q9H4I9 107 aa5.88□□□□□ -1.47
USP28-202ENST00000535607 CHMP1AQ9HD42 196 aaPredicted RBP5.88□□□□□ -1.47
USP28-202ENST00000535607 MRPS30Q9NP92 439 aaKnown RBP5.88□□□□□ -1.47
USP28-202ENST00000535607 SLC2A8Q9NY64 477 aa5.88□□□□□ -1.47
USP28-202ENST00000535607 IL36AQ9UHA7 158 aa5.88□□□□□ -1.47
USP28-202ENST00000535607 TAC3Q9UHF0 121 aa5.88□□□□□ -1.47
USP28-202ENST00000535607 SHPKQ9UHJ6 478 aa5.88□□□□□ -1.47
USP28-202ENST00000535607 ICAM5Q9UMF0 924 aa5.88□□□□□ -1.47
USP28-202ENST00000535607 SH2B3Q9UQQ2 575 aa5.88□□□□□ -1.47
USP28-202ENST00000535607 BPTFQ12830 3046 aa5.88□□□□□ -1.47
USP28-202ENST00000535607 TRBV6-7A0A0A0MS04 114 aa5.87□□□□□ -1.47
USP28-202ENST00000535607 TRBV5-5A0A0J9YX44 114 aa5.87□□□□□ -1.47
USP28-202ENST00000535607 EDDM13A0A1B0GTR0 161 aa5.87□□□□□ -1.47
USP28-202ENST00000535607 MEX3AA1L020 520 aaKnown RBP5.87□□□□□ -1.47
USP28-202ENST00000535607 A1L4Q6 167 aa5.87□□□□□ -1.47
USP28-202ENST00000535607 LRIT2A6NDA9 550 aa5.87□□□□□ -1.47
USP28-202ENST00000535607 URADA6NGE7 173 aa5.87□□□□□ -1.47
USP28-202ENST00000535607 GPR89AB7ZAQ6 455 aa5.87□□□□□ -1.47
USP28-202ENST00000535607 RTCAO00442 366 aaKnown RBP5.87□□□□□ -1.47
USP28-202ENST00000535607 SLC17A2O00624 439 aa5.87□□□□□ -1.47
USP28-202ENST00000535607 ARPC3O15145 178 aa5.87□□□□□ -1.47
USP28-202ENST00000535607 MPPED1O15442 326 aa5.87□□□□□ -1.47
USP28-202ENST00000535607 CTAG2O75638 210 aa5.87□□□□□ -1.47
USP28-202ENST00000535607 KAT7O95251 611 aa5.87□□□□□ -1.47
USP28-202ENST00000535607 DUS4LO95620 317 aaKnown RBP5.87□□□□□ -1.47
USP28-202ENST00000535607 CSTBP04080 98 aaKnown RBP5.87□□□□□ -1.47
USP28-202ENST00000535607 CD74P04233 296 aa5.87□□□□□ -1.47
USP28-202ENST00000535607 GUSBP08236 651 aa5.87□□□□□ -1.47
USP28-202ENST00000535607 CISD3P0C7P0 127 aa5.87□□□□□ -1.47
USP28-202ENST00000535607 SLC35G4P0C7Q5 338 aa5.87□□□□□ -1.47
USP28-202ENST00000535607 GPR89BP0CG08 455 aa5.87□□□□□ -1.47
USP28-202ENST00000535607 F3P13726 295 aa5.87□□□□□ -1.47
USP28-202ENST00000535607 RAB4AP20338 218 aa5.87□□□□□ -1.47
USP28-202ENST00000535607 RAB5AP20339 215 aa5.87□□□□□ -1.47
USP28-202ENST00000535607 DRD1P21728 446 aa5.87□□□□□ -1.47
USP28-202ENST00000535607 ZFP36P26651 326 aaKnown RBP5.87□□□□□ -1.47
USP28-202ENST00000535607 AK4P27144 223 aaPredicted RBP5.87□□□□□ -1.47
USP28-202ENST00000535607 CD1CP29017 333 aa5.87□□□□□ -1.47
USP28-202ENST00000535607 TNFRSF4P43489 277 aa5.87□□□□□ -1.47
USP28-202ENST00000535607 PPICP45877 212 aa5.87□□□□□ -1.47
USP28-202ENST00000535607 SLC25A1P53007 311 aa5.87□□□□□ -1.47
USP28-202ENST00000535607 SIM1P81133 766 aaPredicted RBP5.87□□□□□ -1.47
USP28-202ENST00000535607 DHRS2Q13268 280 aa5.87□□□□□ -1.47
USP28-202ENST00000535607 SERTAD2Q14140 314 aa5.87□□□□□ -1.47
USP28-202ENST00000535607 ELOCQ15369 112 aa5.87□□□□□ -1.47
USP28-202ENST00000535607 CEBPEQ15744 281 aa5.87□□□□□ -1.47
USP28-202ENST00000535607 SSX2Q16385 188 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 183.5 ms