RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 SIGLECL1Q8N7X8 197 aa11.48□□□□□ -0.57
SPG11-203ENST00000535302 NPEPL1Q8NDH3 523 aa11.48□□□□□ -0.57
SPG11-203ENST00000535302 GJC3Q8NFK1 279 aa11.48□□□□□ -0.57
SPG11-203ENST00000535302 EGLN1Q9GZT9 426 aa11.48□□□□□ -0.57
SPG11-203ENST00000535302 PLEKHF2Q9H8W4 249 aa11.48□□□□□ -0.57
SPG11-203ENST00000535302 MAML2Q8IZL2 1156 aaPredicted RBP11.48□□□□□ -0.57
SPG11-203ENST00000535302 LURAP1Q96LR2 239 aa11.48□□□□□ -0.57
SPG11-203ENST00000535302 MBOAT4Q96T53 435 aa11.48□□□□□ -0.57
SPG11-203ENST00000535302 CSF3RQ99062 836 aa11.48□□□□□ -0.57
SPG11-203ENST00000535302 SLCO1B1Q9Y6L6 691 aa11.48□□□□□ -0.57
SPG11-203ENST00000535302 GPRIN2O60269 458 aa11.47□□□□□ -0.57
SPG11-203ENST00000535302 GRINAQ7Z429 371 aa11.47□□□□□ -0.57
SPG11-203ENST00000535302 CDC20BQ86Y33 519 aa11.47□□□□□ -0.57
SPG11-203ENST00000535302 RXFP4Q8TDU9 374 aa11.47□□□□□ -0.57
SPG11-203ENST00000535302 BLNKQ8WV28 456 aa11.47□□□□□ -0.57
SPG11-203ENST00000535302 MOB3AQ96BX8 217 aa11.47□□□□□ -0.57
SPG11-203ENST00000535302 GPR171O14626 319 aa11.47□□□□□ -0.57
SPG11-203ENST00000535302 HOXC11O43248 304 aaPredicted RBP11.47□□□□□ -0.57
SPG11-203ENST00000535302 ETHE1O95571 254 aa11.47□□□□□ -0.57
SPG11-203ENST00000535302 RELL2Q8NC24 303 aaPredicted RBP11.47□□□□□ -0.57
SPG11-203ENST00000535302 KIRREL1Q96J84 757 aa11.47□□□□□ -0.57
SPG11-203ENST00000535302 TEAD3Q99594 435 aa11.47□□□□□ -0.57
SPG11-203ENST00000535302 SLC2A9Q9NRM0 540 aa11.47□□□□□ -0.57
SPG11-203ENST00000535302 METTL15P1P0C7V9 234 aa11.47□□□□□ -0.57
SPG11-203ENST00000535302 S100A4P26447 101 aaKnown RBP11.47□□□□□ -0.57
SPG11-203ENST00000535302 CCL7P80098 99 aa11.47□□□□□ -0.57
SPG11-203ENST00000535302 COL19A1Q14993 1142 aa11.47□□□□□ -0.57
SPG11-203ENST00000535302 FBXO17Q96EF6 278 aa11.47□□□□□ -0.57
SPG11-203ENST00000535302 FSCN3Q9NQT6 498 aa11.47□□□□□ -0.57
SPG11-203ENST00000535302 LOC107986453A0A1B0GWG9 222 aa11.47□□□□□ -0.57
SPG11-203ENST00000535302 PRRG2O14669 202 aa11.47□□□□□ -0.57
SPG11-203ENST00000535302 SLC25A4P12235 298 aa11.47□□□□□ -0.57
SPG11-203ENST00000535302 NKX2-1P43699 371 aaPredicted RBP11.47□□□□□ -0.57
SPG11-203ENST00000535302 ZNF239Q16600 458 aaKnown RBP11.47□□□□□ -0.57
SPG11-203ENST00000535302 CTU2Q2VPK5 515 aaKnown RBP11.47□□□□□ -0.57
SPG11-203ENST00000535302 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.47□□□□□ -0.57
SPG11-203ENST00000535302 ZNF416Q9BWM5 594 aa11.47□□□□□ -0.57
SPG11-203ENST00000535302 OR52B4Q8NGK2 314 aa11.47□□□□□ -0.57
SPG11-203ENST00000535302 MENTQ9BUN1 341 aa11.47□□□□□ -0.57
SPG11-203ENST00000535302 TMEM38AQ9H6F2 299 aa11.47□□□□□ -0.57
SPG11-203ENST00000535302 SOD1P00441 154 aa11.47□□□□□ -0.57
SPG11-203ENST00000535302 APELAP0DMC3 54 aa11.47□□□□□ -0.57
SPG11-203ENST00000535302 SUB1P53999 127 aaKnown RBP eCLIP11.47□□□□□ -0.572e-7■■■□□ 16.3
SPG11-203ENST00000535302 SNRPNP63162 240 aaKnown RBP11.47□□□□□ -0.57
SPG11-203ENST00000535302 TMEM267Q0VDI3 215 aaPredicted RBP11.47□□□□□ -0.57
SPG11-203ENST00000535302 ACTBL2Q562R1 376 aa11.47□□□□□ -0.57
SPG11-203ENST00000535302 SLAMF6Q96DU3 332 aa11.47□□□□□ -0.57
SPG11-203ENST00000535302 LYRM4Q9HD34 91 aa11.47□□□□□ -0.57
SPG11-203ENST00000535302 SLC22A11Q9NSA0 550 aa11.47□□□□□ -0.57
SPG11-203ENST00000535302 SLC17A4Q9Y2C5 497 aa11.47□□□□□ -0.57
SPG11-203ENST00000535302 SH2D1BO14796 132 aa11.46□□□□□ -0.57
SPG11-203ENST00000535302 KCNAB3O43448 404 aa11.46□□□□□ -0.57
SPG11-203ENST00000535302 CXCL13O43927 109 aa11.46□□□□□ -0.57
SPG11-203ENST00000535302 AMTP48728 403 aa11.46□□□□□ -0.57
SPG11-203ENST00000535302 FABP9Q0Z7S8 132 aa11.46□□□□□ -0.57
SPG11-203ENST00000535302 ELAVL1Q15717 326 aaKnown RBP11.46□□□□□ -0.57
SPG11-203ENST00000535302 C1QTNF3Q9BXJ4 246 aa11.46□□□□□ -0.57
SPG11-203ENST00000535302 COX7A2P2O60397 106 aa11.46□□□□□ -0.57
SPG11-203ENST00000535302 TFAP2AP05549 437 aa11.46□□□□□ -0.57
SPG11-203ENST00000535302 FGF7P21781 194 aa11.46□□□□□ -0.57
SPG11-203ENST00000535302 AGERQ15109 404 aa11.46□□□□□ -0.57
SPG11-203ENST00000535302 OR5M8Q8NGP6 311 aa11.46□□□□□ -0.57
SPG11-203ENST00000535302 UBE2L5PA0A1B0GUS4 154 aa11.46□□□□□ -0.57
SPG11-203ENST00000535302 UMAD1C9J7I0 102 aa11.46□□□□□ -0.57
SPG11-203ENST00000535302 G3V3Q6 166 aa11.46□□□□□ -0.57
SPG11-203ENST00000535302 H2AFB1P0C5Y9 115 aa11.46□□□□□ -0.57
SPG11-203ENST00000535302 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.46□□□□□ -0.57
SPG11-203ENST00000535302 PLA2G3Q9NZ20 509 aa11.46□□□□□ -0.57
SPG11-203ENST00000535302 FLVCR1Q9Y5Y0 555 aa11.46□□□□□ -0.57
SPG11-203ENST00000535302 PMS2P1A4D2B8 440 aa11.46□□□□□ -0.58
SPG11-203ENST00000535302 H3BMH7 237 aa11.46□□□□□ -0.58
SPG11-203ENST00000535302 PMCHP20382 165 aa11.46□□□□□ -0.58
SPG11-203ENST00000535302 CLDN15P56746 228 aa11.46□□□□□ -0.58
SPG11-203ENST00000535302 ZNF266Q14584 549 aa11.46□□□□□ -0.58
SPG11-203ENST00000535302 SYT14P1Q58G82 188 aa11.46□□□□□ -0.58
SPG11-203ENST00000535302 C16orf52Q8NHV5 167 aa11.46□□□□□ -0.58
SPG11-203ENST00000535302 TCEAL7Q9BRU2 100 aa11.46□□□□□ -0.58
SPG11-203ENST00000535302 ACER3Q9NUN7 267 aa11.46□□□□□ -0.58
SPG11-203ENST00000535302 SLC25A37Q9NYZ2 338 aa11.46□□□□□ -0.58
SPG11-203ENST00000535302 TRAV34A0A0B4J273 112 aa11.46□□□□□ -0.58
SPG11-203ENST00000535302 ANKUB1A6NFN9 424 aa11.46□□□□□ -0.58
SPG11-203ENST00000535302 FAM90A27PA6NNH2 459 aa11.46□□□□□ -0.58
SPG11-203ENST00000535302 ADRA2CP18825 462 aa11.46□□□□□ -0.58
SPG11-203ENST00000535302 GPM6AP51674 278 aa11.46□□□□□ -0.58
SPG11-203ENST00000535302 PDZK1IP1Q13113 114 aa11.46□□□□□ -0.58
SPG11-203ENST00000535302 SNTB1Q13884 538 aaKnown RBP11.46□□□□□ -0.58
SPG11-203ENST00000535302 RTL8BQ17RB0 113 aa11.46□□□□□ -0.58
SPG11-203ENST00000535302 ZNF528Q3MIS6 628 aa11.46□□□□□ -0.58
SPG11-203ENST00000535302 LIPNQ5VXI9 398 aa11.46□□□□□ -0.58
SPG11-203ENST00000535302 DRAM2Q6UX65 266 aa11.46□□□□□ -0.58
SPG11-203ENST00000535302 FBXL6Q8N531 539 aa11.46□□□□□ -0.58
SPG11-203ENST00000535302 DDOQ99489 341 aa11.46□□□□□ -0.58
SPG11-203ENST00000535302 RTL8AQ9BWD3 113 aa11.46□□□□□ -0.58
SPG11-203ENST00000535302 ASIC5Q9NY37 505 aa11.46□□□□□ -0.58
SPG11-203ENST00000535302 DOK5Q9P104 306 aa11.46□□□□□ -0.58
SPG11-203ENST00000535302 OR2M5A3KFT3 312 aa11.45□□□□□ -0.58
SPG11-203ENST00000535302 PPP1R2P9O14990 202 aa11.45□□□□□ -0.58
SPG11-203ENST00000535302 RGS11O94810 467 aa11.45□□□□□ -0.58
SPG11-203ENST00000535302 CPN1P15169 458 aa11.45□□□□□ -0.58
SPG11-203ENST00000535302 NME1P15531 152 aaKnown RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms