RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 HSPB2A8KAH6 182 aa16.46■□□□□ 0.23
SFSWAP-203ENST00000535236 HSPB2Q16082 182 aa16.46■□□□□ 0.23
SFSWAP-203ENST00000535236 FBXO17Q96EF6 278 aa16.46■□□□□ 0.23
SFSWAP-203ENST00000535236 PARP12Q9H0J9 701 aaKnown RBP16.46■□□□□ 0.23
SFSWAP-203ENST00000535236 TMEM235A6NFC5 223 aa16.46■□□□□ 0.23
SFSWAP-203ENST00000535236 LMO7DNF2Z398 122 aa16.46■□□□□ 0.23
SFSWAP-203ENST00000535236 SSSCA1O60232 199 aa16.46■□□□□ 0.23
SFSWAP-203ENST00000535236 TGM1P22735 817 aa16.46■□□□□ 0.23
SFSWAP-203ENST00000535236 PGFP49763 221 aa16.46■□□□□ 0.23
SFSWAP-203ENST00000535236 DSCR4P56555 118 aaPredicted RBP16.46■□□□□ 0.23
SFSWAP-203ENST00000535236 C9orf50Q5SZB4 431 aa16.46■□□□□ 0.23
SFSWAP-203ENST00000535236 SARGQ9BW04 601 aa16.46■□□□□ 0.23
SFSWAP-203ENST00000535236 LILRA5A6NI73 299 aa16.46■□□□□ 0.23
SFSWAP-203ENST00000535236 CTSLP07711 333 aa16.46■□□□□ 0.23
SFSWAP-203ENST00000535236 SUMO3P55854 103 aaPredicted RBP16.46■□□□□ 0.23
SFSWAP-203ENST00000535236 ZNF705AQ6ZN79 300 aaPredicted RBP16.46■□□□□ 0.23
SFSWAP-203ENST00000535236 SDCBPO00560 298 aaPredicted RBP16.46■□□□□ 0.23
SFSWAP-203ENST00000535236 EDIL3O43854 480 aa16.46■□□□□ 0.23
SFSWAP-203ENST00000535236 TPBGQ13641 420 aa16.46■□□□□ 0.23
SFSWAP-203ENST00000535236 TAF9Q16594 264 aa16.46■□□□□ 0.23
SFSWAP-203ENST00000535236 TMEM268Q5VZI3 342 aa16.46■□□□□ 0.23
SFSWAP-203ENST00000535236 FBXL14Q8N1E6 418 aa16.46■□□□□ 0.23
SFSWAP-203ENST00000535236 OR1J1Q8NGS3 322 aa16.46■□□□□ 0.23
SFSWAP-203ENST00000535236 FAM122AQ96E09 287 aa16.46■□□□□ 0.23
SFSWAP-203ENST00000535236 RNF150Q9ULK6 438 aa16.46■□□□□ 0.23
SFSWAP-203ENST00000535236 MYH9P35579 1960 aaKnown RBP16.46■□□□□ 0.22
SFSWAP-203ENST00000535236 SPTY2D1-AS1A0A0U1RR47 76 aa16.45■□□□□ 0.22
SFSWAP-203ENST00000535236 BTG1P62324 171 aa16.45■□□□□ 0.22
SFSWAP-203ENST00000535236 OR1C1Q15619 314 aa16.45■□□□□ 0.22
SFSWAP-203ENST00000535236 SLC25A26Q70HW3 274 aa16.45■□□□□ 0.22
SFSWAP-203ENST00000535236 OR10AD1Q8NGE0 317 aa16.45■□□□□ 0.22
SFSWAP-203ENST00000535236 OR5M9Q8NGP3 310 aa16.45■□□□□ 0.22
SFSWAP-203ENST00000535236 SCARB1Q8WTV0 552 aa16.45■□□□□ 0.22
SFSWAP-203ENST00000535236 SPACA9Q96E40 222 aaPredicted RBP16.45■□□□□ 0.22
SFSWAP-203ENST00000535236 GNPNAT1Q96EK6 184 aaPredicted RBP16.45■□□□□ 0.22
SFSWAP-203ENST00000535236 TAAR5O14804 337 aa16.45■□□□□ 0.22
SFSWAP-203ENST00000535236 SLC31A2O15432 143 aa16.45■□□□□ 0.22
SFSWAP-203ENST00000535236 SULT1C4O75897 302 aa16.45■□□□□ 0.22
SFSWAP-203ENST00000535236 POU2F2P09086 479 aa16.45■□□□□ 0.22
SFSWAP-203ENST00000535236 Q6ZNB5 142 aa16.45■□□□□ 0.22
SFSWAP-203ENST00000535236 SYS1Q8N2H4 156 aa16.45■□□□□ 0.22
SFSWAP-203ENST00000535236 LRRC61Q9BV99 259 aa16.45■□□□□ 0.22
SFSWAP-203ENST00000535236 STRAPQ9Y3F4 350 aaKnown RBP16.45■□□□□ 0.22
SFSWAP-203ENST00000535236 ANKUB1A6NFN9 424 aa16.45■□□□□ 0.22
SFSWAP-203ENST00000535236 JUNBP17275 347 aaPredicted RBP16.45■□□□□ 0.22
SFSWAP-203ENST00000535236 ACOT6Q3I5F7 207 aaPredicted RBP16.45■□□□□ 0.22
SFSWAP-203ENST00000535236 SIGLEC11Q96RL6 698 aa16.45■□□□□ 0.22
SFSWAP-203ENST00000535236 BCL2L10Q9HD36 194 aa16.45■□□□□ 0.22
SFSWAP-203ENST00000535236 AHDC1Q5TGY3 1603 aaPredicted RBP16.45■□□□□ 0.22
SFSWAP-203ENST00000535236 PIAS2O75928 621 aa16.45■□□□□ 0.22
SFSWAP-203ENST00000535236 SLC17A1Q14916 467 aa16.45■□□□□ 0.22
SFSWAP-203ENST00000535236 EDARADDQ8WWZ3 215 aa16.45■□□□□ 0.22
SFSWAP-203ENST00000535236 ACTR3CQ9C0K3 210 aaPredicted RBP16.45■□□□□ 0.22
SFSWAP-203ENST00000535236 GDF2Q9UK05 429 aaPredicted RBP16.45■□□□□ 0.22
SFSWAP-203ENST00000535236 CYTIPO60759 359 aa16.45■□□□□ 0.22
SFSWAP-203ENST00000535236 CRYBA1P05813 215 aa16.45■□□□□ 0.22
SFSWAP-203ENST00000535236 FCGR2CP31995 323 aa16.45■□□□□ 0.22
SFSWAP-203ENST00000535236 TVP23CQ96ET8 276 aa16.45■□□□□ 0.22
SFSWAP-203ENST00000535236 IKZF5Q9H5V7 419 aa16.45■□□□□ 0.22
SFSWAP-203ENST00000535236 TRAV17A0A0B4J275 112 aa16.44■□□□□ 0.22
SFSWAP-203ENST00000535236 CCR2P41597 374 aa16.44■□□□□ 0.22
SFSWAP-203ENST00000535236 TOR2AQ5JU69 321 aa16.44■□□□□ 0.22
SFSWAP-203ENST00000535236 FAM122BQ7Z309 247 aa16.44■□□□□ 0.22
SFSWAP-203ENST00000535236 LINC00615Q96LM1 132 aaPredicted RBP16.44■□□□□ 0.22
SFSWAP-203ENST00000535236 TRGV5A0A0B4J1U4 118 aa16.44■□□□□ 0.22
SFSWAP-203ENST00000535236 XKRY2A2RUG3 117 aa16.44■□□□□ 0.22
SFSWAP-203ENST00000535236 OR7C2O60412 319 aa16.44■□□□□ 0.22
SFSWAP-203ENST00000535236 IAPPP10997 89 aa16.44■□□□□ 0.22
SFSWAP-203ENST00000535236 BTNL8Q6UX41 500 aa16.44■□□□□ 0.22
SFSWAP-203ENST00000535236 LYSMD2Q8IV50 215 aa16.44■□□□□ 0.22
SFSWAP-203ENST00000535236 CIB3Q96Q77 187 aaPredicted RBP16.44■□□□□ 0.22
SFSWAP-203ENST00000535236 RGPD2P0DJD1 1756 aa16.44■□□□□ 0.22
SFSWAP-203ENST00000535236 ANKRD12Q6UB98 2062 aa16.44■□□□□ 0.22
SFSWAP-203ENST00000535236 LRRC10Q5BKY1 277 aa16.44■□□□□ 0.22
SFSWAP-203ENST00000535236 Q6ZS52 159 aa16.44■□□□□ 0.22
SFSWAP-203ENST00000535236 NT5CQ8TCD5 201 aa16.44■□□□□ 0.22
SFSWAP-203ENST00000535236 SLC35B4Q969S0 331 aa16.44■□□□□ 0.22
SFSWAP-203ENST00000535236 FAM173AQ9BQD7 235 aa16.44■□□□□ 0.22
SFSWAP-203ENST00000535236 URGCP-MRPS24S4R325 110 aa16.44■□□□□ 0.22
SFSWAP-203ENST00000535236 V9GYS6 101 aa16.44■□□□□ 0.22
SFSWAP-203ENST00000535236 TRGV10A0A0A0MS01 117 aa16.44■□□□□ 0.22
SFSWAP-203ENST00000535236 A0A1B0GVG6 124 aa16.44■□□□□ 0.22
SFSWAP-203ENST00000535236 NDUFB3O43676 98 aa16.44■□□□□ 0.22
SFSWAP-203ENST00000535236 RPS27P42677 84 aaKnown RBP16.44■□□□□ 0.22
SFSWAP-203ENST00000535236 HIST2H3AQ71DI3 136 aa16.44■□□□□ 0.22
SFSWAP-203ENST00000535236 ZNRF4Q8WWF5 429 aa16.44■□□□□ 0.22
SFSWAP-203ENST00000535236 GABARAPL1Q9H0R8 117 aa16.44■□□□□ 0.22
SFSWAP-203ENST00000535236 AQP7P3A6NL99 342 aa16.43■□□□□ 0.22
SFSWAP-203ENST00000535236 SPRY3O43610 288 aa16.43■□□□□ 0.22
SFSWAP-203ENST00000535236 NME2P1O60361 137 aa16.43■□□□□ 0.22
SFSWAP-203ENST00000535236 IGLV3-25P01717 112 aa16.43■□□□□ 0.22
SFSWAP-203ENST00000535236 DEFA6Q01524 100 aa16.43■□□□□ 0.22
SFSWAP-203ENST00000535236 FBXL6Q8N531 539 aa16.43■□□□□ 0.22
SFSWAP-203ENST00000535236 RGPD5Q99666 1765 aa16.43■□□□□ 0.22
SFSWAP-203ENST00000535236 TNFRSF1AP19438 455 aa16.43■□□□□ 0.22
SFSWAP-203ENST00000535236 OR4F5Q8NH21 305 aa16.43■□□□□ 0.22
SFSWAP-203ENST00000535236 OR4F4Q96R69 305 aa16.43■□□□□ 0.22
SFSWAP-203ENST00000535236 C20orf24Q9BUV8 137 aa16.43■□□□□ 0.22
SFSWAP-203ENST00000535236 GABARAPL3Q9BY60 117 aa16.43■□□□□ 0.22
SFSWAP-203ENST00000535236 SLC22A13Q9Y226 551 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms