RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 M0R135 149 aa12.99□□□□□ -0.33
CPSF1-211ENST00000533492 MLNRO43193 412 aa12.99□□□□□ -0.33
CPSF1-211ENST00000533492 CALB2P22676 271 aa12.99□□□□□ -0.33
CPSF1-211ENST00000533492 FPR2P25090 351 aa12.99□□□□□ -0.33
CPSF1-211ENST00000533492 FMO3P31513 532 aa12.99□□□□□ -0.33
CPSF1-211ENST00000533492 SLC6A9P48067 706 aa12.99□□□□□ -0.33
CPSF1-211ENST00000533492 GK2Q14410 553 aaPredicted RBP12.99□□□□□ -0.33
CPSF1-211ENST00000533492 MICAQ29983 383 aa12.99□□□□□ -0.33
CPSF1-211ENST00000533492 KRTAP27-1Q3LI81 207 aa12.99□□□□□ -0.33
CPSF1-211ENST00000533492 ESCO2Q56NI9 601 aa12.99□□□□□ -0.33
CPSF1-211ENST00000533492 OR2T5Q6IEZ7 315 aa12.99□□□□□ -0.33
CPSF1-211ENST00000533492 ZNF770Q6IQ21 691 aaPredicted RBP12.99□□□□□ -0.33
CPSF1-211ENST00000533492 LCN8Q6JVE9 175 aa12.99□□□□□ -0.33
CPSF1-211ENST00000533492 USP43Q70EL4 1123 aa12.99□□□□□ -0.33
CPSF1-211ENST00000533492 MRPL21Q7Z2W9 205 aaKnown RBP12.99□□□□□ -0.33
CPSF1-211ENST00000533492 MOGAT3Q86VF5 341 aa12.99□□□□□ -0.33
CPSF1-211ENST00000533492 C1orf87Q8N0U7 546 aa12.99□□□□□ -0.33
CPSF1-211ENST00000533492 SLC37A3Q8NCC5 494 aa12.99□□□□□ -0.33
CPSF1-211ENST00000533492 CCDC197Q8NCU1 140 aa12.99□□□□□ -0.33
CPSF1-211ENST00000533492 OR51L1Q8NGJ5 315 aa12.99□□□□□ -0.33
CPSF1-211ENST00000533492 OR2T29Q8NH02 315 aa12.99□□□□□ -0.33
CPSF1-211ENST00000533492 SPRYD4Q8WW59 207 aaPredicted RBP12.99□□□□□ -0.33
CPSF1-211ENST00000533492 ZNF799Q96GE5 643 aa12.99□□□□□ -0.33
CPSF1-211ENST00000533492 MAP6Q96JE9 813 aa12.99□□□□□ -0.33
CPSF1-211ENST00000533492 LRGUKQ96M69 825 aa12.99□□□□□ -0.33
CPSF1-211ENST00000533492 DDOQ99489 341 aa12.99□□□□□ -0.33
CPSF1-211ENST00000533492 PLA2G12AQ9BZM1 189 aa12.99□□□□□ -0.33
CPSF1-211ENST00000533492 PNRC2Q9NPJ4 139 aaKnown RBP12.99□□□□□ -0.33
CPSF1-211ENST00000533492 MMP26Q9NRE1 261 aa12.99□□□□□ -0.33
CPSF1-211ENST00000533492 BAIAP2Q9UQB8 552 aa12.99□□□□□ -0.33
CPSF1-211ENST00000533492 ZNF205O95201 554 aa12.98□□□□□ -0.33
CPSF1-211ENST00000533492 FAM107AO95990 144 aa12.98□□□□□ -0.33
CPSF1-211ENST00000533492 CYB5R3P00387 301 aaPredicted RBP12.98□□□□□ -0.33
CPSF1-211ENST00000533492 HLA-DPB1P04440 258 aa12.98□□□□□ -0.33
CPSF1-211ENST00000533492 IRF2P14316 349 aa12.98□□□□□ -0.33
CPSF1-211ENST00000533492 RPS27P42677 84 aaKnown RBP12.98□□□□□ -0.33
CPSF1-211ENST00000533492 RAD23AP54725 363 aa12.98□□□□□ -0.33
CPSF1-211ENST00000533492 PRSS12P56730 875 aa12.98□□□□□ -0.33
CPSF1-211ENST00000533492 HILS1P60008 231 aa12.98□□□□□ -0.33
CPSF1-211ENST00000533492 MS4A2Q01362 244 aa12.98□□□□□ -0.33
CPSF1-211ENST00000533492 TAF13Q15543 124 aa12.98□□□□□ -0.33
CPSF1-211ENST00000533492 C12orf54Q6X4T0 127 aa12.98□□□□□ -0.33
CPSF1-211ENST00000533492 LNX2Q8N448 690 aa12.98□□□□□ -0.33
CPSF1-211ENST00000533492 SEMA6DQ8NFY4 1073 aa12.98□□□□□ -0.33
CPSF1-211ENST00000533492 OR2T33Q8NG76 320 aa12.98□□□□□ -0.33
CPSF1-211ENST00000533492 OR8D4Q8NGM9 314 aa12.98□□□□□ -0.33
CPSF1-211ENST00000533492 OR9Q1Q8NGQ5 310 aa12.98□□□□□ -0.33
CPSF1-211ENST00000533492 MRI1Q9BV20 369 aa12.98□□□□□ -0.33
CPSF1-211ENST00000533492 OPN4Q9UHM6 478 aa12.98□□□□□ -0.33
CPSF1-211ENST00000533492 PRPF19Q9UMS4 504 aaKnown RBP12.98□□□□□ -0.33
CPSF1-211ENST00000533492 AUP1Q9Y679 476 aa12.98□□□□□ -0.33
CPSF1-211ENST00000533492 CEACAM18A8MTB9 384 aa12.97□□□□□ -0.33
CPSF1-211ENST00000533492 SOX14O95416 240 aa12.97□□□□□ -0.33
CPSF1-211ENST00000533492 IFNGP01579 166 aa12.97□□□□□ -0.33
CPSF1-211ENST00000533492 SPARCP09486 303 aa12.97□□□□□ -0.33
CPSF1-211ENST00000533492 SEC61A1P61619 476 aaKnown RBP12.97□□□□□ -0.33
CPSF1-211ENST00000533492 ACTG1P63261 375 aa12.97□□□□□ -0.33
CPSF1-211ENST00000533492 ZNF154Q13106 437 aa12.97□□□□□ -0.33
CPSF1-211ENST00000533492 CRMP1Q14194 572 aa12.97□□□□□ -0.33
CPSF1-211ENST00000533492 ARMCX4Q5H9R4 360 aa12.97□□□□□ -0.33
CPSF1-211ENST00000533492 ZNF362Q5T0B9 420 aaPredicted RBP12.97□□□□□ -0.33
CPSF1-211ENST00000533492 DRAM2Q6UX65 266 aa12.97□□□□□ -0.33
CPSF1-211ENST00000533492 DCXRQ7Z4W1 244 aa12.97□□□□□ -0.33
CPSF1-211ENST00000533492 OR11L1Q8NGX0 322 aa12.97□□□□□ -0.33
CPSF1-211ENST00000533492 ZNRF4Q8WWF5 429 aa12.97□□□□□ -0.33
CPSF1-211ENST00000533492 SLC6A7Q99884 636 aa12.97□□□□□ -0.33
CPSF1-211ENST00000533492 COPS4Q9BT78 406 aa12.97□□□□□ -0.33
CPSF1-211ENST00000533492 DGCR6LQ9BY27 220 aa12.97□□□□□ -0.33
CPSF1-211ENST00000533492 SLC22A4Q9H015 551 aa12.97□□□□□ -0.33
CPSF1-211ENST00000533492 TMEM165Q9HC07 324 aa12.97□□□□□ -0.33
CPSF1-211ENST00000533492 CENPMQ9NSP4 180 aa12.97□□□□□ -0.33
CPSF1-211ENST00000533492 MIOXQ9UGB7 285 aa12.97□□□□□ -0.33
CPSF1-211ENST00000533492 OR5V1Q9UGF6 321 aa12.97□□□□□ -0.33
CPSF1-211ENST00000533492 POLR3KQ9Y2Y1 108 aaPredicted RBP12.97□□□□□ -0.33
CPSF1-211ENST00000533492 NOP16Q9Y3C1 178 aaKnown RBP12.97□□□□□ -0.33
CPSF1-211ENST00000533492 N6AMT1Q9Y5N5 214 aa12.97□□□□□ -0.33
CPSF1-211ENST00000533492 GGT3PA6NGU5 568 aa12.96□□□□□ -0.33
CPSF1-211ENST00000533492 F5H0A9 414 aaPredicted RBP12.96□□□□□ -0.33
CPSF1-211ENST00000533492 TRAPPC2LH3BP13 241 aa12.96□□□□□ -0.33
CPSF1-211ENST00000533492 ZNF593O00488 134 aaPredicted RBP12.96□□□□□ -0.33
CPSF1-211ENST00000533492 GYPBP06028 91 aa12.96□□□□□ -0.33
CPSF1-211ENST00000533492 WNT2P09544 360 aa12.96□□□□□ -0.33
CPSF1-211ENST00000533492 RPS2P15880 293 aaKnown RBP12.96□□□□□ -0.33
CPSF1-211ENST00000533492 ZNF12P17014 697 aa12.96□□□□□ -0.33
CPSF1-211ENST00000533492 CPT2P23786 658 aa12.96□□□□□ -0.33
CPSF1-211ENST00000533492 ENTPD1P49961 510 aa12.96□□□□□ -0.33
CPSF1-211ENST00000533492 BLVRAP53004 296 aa12.96□□□□□ -0.33
CPSF1-211ENST00000533492 OR8G1Q15617 311 aa12.96□□□□□ -0.33
CPSF1-211ENST00000533492 ZNF181Q2M3W8 571 aa12.96□□□□□ -0.33
CPSF1-211ENST00000533492 LYPD4Q6UWN0 246 aa12.96□□□□□ -0.33
CPSF1-211ENST00000533492 RBMS3Q6XE24 437 aaKnown RBP12.96□□□□□ -0.33
CPSF1-211ENST00000533492 CELF2-AS1Q8N7Q2 184 aa12.96□□□□□ -0.33
CPSF1-211ENST00000533492 ZNF511Q8NB15 262 aa12.96□□□□□ -0.33
CPSF1-211ENST00000533492 DEFB108BQ8NET1 73 aa12.96□□□□□ -0.33
CPSF1-211ENST00000533492 OR10G2Q8NGC3 310 aa12.96□□□□□ -0.33
CPSF1-211ENST00000533492 OR10S1Q8NGN2 331 aa12.96□□□□□ -0.33
CPSF1-211ENST00000533492 OR6K6Q8NGW6 343 aa12.96□□□□□ -0.33
CPSF1-211ENST00000533492 OR4Q3Q8NH05 313 aa12.96□□□□□ -0.33
CPSF1-211ENST00000533492 C22orf15Q8WYQ4 148 aa12.96□□□□□ -0.33
CPSF1-211ENST00000533492 ERGIC1Q969X5 290 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms