RNA–Protein interactions for RNA: ENST00000533069.1

PKP3-209, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-209ENST00000533069 DIRC2Q96SL1 478 aa14.19□□□□□ -0.14
PKP3-209ENST00000533069 COQ7Q99807 217 aa14.19□□□□□ -0.14
PKP3-209ENST00000533069 SAP30LQ9HAJ7 183 aa14.19□□□□□ -0.14
PKP3-209ENST00000533069 ZNF275Q9NSD4 429 aaPredicted RBP14.19□□□□□ -0.14
PKP3-209ENST00000533069 CLN6Q9NWW5 311 aa14.19□□□□□ -0.14
PKP3-209ENST00000533069 BLOC1S6Q9UL45 172 aa14.19□□□□□ -0.14
PKP3-209ENST00000533069 ZDHHC8Q9ULC8 765 aa14.19□□□□□ -0.14
PKP3-209ENST00000533069 LHFPL6Q9Y693 200 aa14.19□□□□□ -0.14
PKP3-209ENST00000533069 IGHV1-69-2A0A0G2JMI3 117 aa14.18□□□□□ -0.14
PKP3-209ENST00000533069 OR6C68A6NDL8 312 aa14.18□□□□□ -0.14
PKP3-209ENST00000533069 RER1O15258 196 aa14.18□□□□□ -0.14
PKP3-209ENST00000533069 TPD52L2O43399 206 aaKnown RBP14.18□□□□□ -0.14
PKP3-209ENST00000533069 GNAO1P09471 354 aa14.18□□□□□ -0.14
PKP3-209ENST00000533069 CRYBB2P43320 205 aa14.18□□□□□ -0.14
PKP3-209ENST00000533069 EFNB1P98172 346 aa14.18□□□□□ -0.14
PKP3-209ENST00000533069 SLC35F1Q5T1Q4 408 aa14.18□□□□□ -0.14
PKP3-209ENST00000533069 TMEM236Q5W0B7 351 aa14.18□□□□□ -0.14
PKP3-209ENST00000533069 OTPQ5XKR4 325 aa14.18□□□□□ -0.14
PKP3-209ENST00000533069 ENTHD1Q8IYW4 607 aa14.18□□□□□ -0.14
PKP3-209ENST00000533069 IQCF1Q8N6M8 205 aa14.18□□□□□ -0.14
PKP3-209ENST00000533069 C1orf159Q96HA4 380 aa14.18□□□□□ -0.14
PKP3-209ENST00000533069 EGLN1Q9GZT9 426 aa14.18□□□□□ -0.14
PKP3-209ENST00000533069 H2AFY2Q9P0M6 372 aaPredicted RBP14.18□□□□□ -0.14
PKP3-209ENST00000533069 KCNG2Q9UJ96 466 aa14.18□□□□□ -0.14
PKP3-209ENST00000533069 GRIP1Q9Y3R0 1128 aa14.18□□□□□ -0.14
PKP3-209ENST00000533069 ABCA1O95477 2261 aa14.18□□□□□ -0.14
PKP3-209ENST00000533069 JMJD1CQ15652 2540 aa14.17□□□□□ -0.14
PKP3-209ENST00000533069 ZSCAN5BA6NJL1 495 aa14.17□□□□□ -0.14
PKP3-209ENST00000533069 PRR23D1E9PI22 279 aaPredicted RBP14.17□□□□□ -0.14
PKP3-209ENST00000533069 PPIHO43447 177 aaKnown RBP14.17□□□□□ -0.14
PKP3-209ENST00000533069 TIMM8AO60220 97 aaPredicted RBP14.17□□□□□ -0.14
PKP3-209ENST00000533069 GPANK1O95872 356 aa14.17□□□□□ -0.14
PKP3-209ENST00000533069 TGFAP01135 160 aa14.17□□□□□ -0.14
PKP3-209ENST00000533069 IFNA2P01563 188 aa14.17□□□□□ -0.14
PKP3-209ENST00000533069 IGHV1-46P01743 117 aa14.17□□□□□ -0.14
PKP3-209ENST00000533069 TFP02787 698 aa14.17□□□□□ -0.14
PKP3-209ENST00000533069 CCDC159P0C7I6 412 aa14.17□□□□□ -0.14
PKP3-209ENST00000533069 FAM157CP0CG43 387 aa14.17□□□□□ -0.14
PKP3-209ENST00000533069 PRR23D2P0DMB1 279 aaPredicted RBP14.17□□□□□ -0.14
PKP3-209ENST00000533069 KITLGP21583 273 aa14.17□□□□□ -0.14
PKP3-209ENST00000533069 ECH1Q13011 328 aa14.17□□□□□ -0.14
PKP3-209ENST00000533069 TSTQ16762 297 aaKnown RBP14.17□□□□□ -0.14
PKP3-209ENST00000533069 MEP1BQ16820 701 aa14.17□□□□□ -0.14
PKP3-209ENST00000533069 TMEM255AQ5JRV8 349 aa14.17□□□□□ -0.14
PKP3-209ENST00000533069 RBM48Q5RL73 367 aaKnown RBP14.17□□□□□ -0.14
PKP3-209ENST00000533069 NXNL2Q5VZ03 156 aa14.17□□□□□ -0.14
PKP3-209ENST00000533069 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.17□□□□□ -0.14
PKP3-209ENST00000533069 TCEANCQ8N8B7 351 aa14.17□□□□□ -0.14
PKP3-209ENST00000533069 LINC01356Q8N9X3 169 aa14.17□□□□□ -0.14
PKP3-209ENST00000533069 OR2T4Q8NH00 348 aa14.17□□□□□ -0.14
PKP3-209ENST00000533069 SLC7A6Q92536 515 aa14.17□□□□□ -0.14
PKP3-209ENST00000533069 GTF3AQ92664 365 aaKnown RBP14.17□□□□□ -0.14
PKP3-209ENST00000533069 ELMOD3Q96FG2 381 aa14.17□□□□□ -0.14
PKP3-209ENST00000533069 CDADC1Q9BWV3 514 aa14.17□□□□□ -0.14
PKP3-209ENST00000533069 BEX2Q9BXY8 128 aa14.17□□□□□ -0.14
PKP3-209ENST00000533069 SHARPINQ9H0F6 387 aa14.17□□□□□ -0.14
PKP3-209ENST00000533069 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.17□□□□□ -0.142e-7■■■□□ 15.9
PKP3-209ENST00000533069 ANK3Q12955 4377 aaKnown RBP14.17□□□□□ -0.14
PKP3-209ENST00000533069 SONP18583 2426 aaKnown RBP14.16□□□□□ -0.14
PKP3-209ENST00000533069 IRGMA1A4Y4 181 aa14.16□□□□□ -0.14
PKP3-209ENST00000533069 PRODHO43272 600 aa14.16□□□□□ -0.14
PKP3-209ENST00000533069 SPRY3O43610 288 aa14.16□□□□□ -0.14
PKP3-209ENST00000533069 CDC14BO60729 498 aa14.16□□□□□ -0.14
PKP3-209ENST00000533069 CLIC3O95833 236 aa14.16□□□□□ -0.14
PKP3-209ENST00000533069 HLA-DQA2P01906 255 aa14.16□□□□□ -0.14
PKP3-209ENST00000533069 GABRB1P18505 474 aa14.16□□□□□ -0.14
PKP3-209ENST00000533069 HNF1AP20823 631 aa14.16□□□□□ -0.14
PKP3-209ENST00000533069 IL2RGP31785 369 aa14.16□□□□□ -0.14
PKP3-209ENST00000533069 BLVRAP53004 296 aa14.16□□□□□ -0.14
PKP3-209ENST00000533069 SLC25A1P53007 311 aa14.16□□□□□ -0.14
PKP3-209ENST00000533069 CDH15P55291 814 aa14.16□□□□□ -0.14
PKP3-209ENST00000533069 PSG7Q13046 419 aa14.16□□□□□ -0.14
PKP3-209ENST00000533069 CDK5R2Q13319 367 aa14.16□□□□□ -0.14
PKP3-209ENST00000533069 HFEQ30201 348 aa14.16□□□□□ -0.14
PKP3-209ENST00000533069 SLC35D3Q5M8T2 416 aa14.16□□□□□ -0.14
PKP3-209ENST00000533069 SLC18B1Q6NT16 456 aa14.16□□□□□ -0.14
PKP3-209ENST00000533069 PROKR2Q8NFJ6 384 aa14.16□□□□□ -0.14
PKP3-209ENST00000533069 OR5L1Q8NGL2 311 aa14.16□□□□□ -0.14
PKP3-209ENST00000533069 OR2AJ1Q8NGZ0 328 aa14.16□□□□□ -0.14
PKP3-209ENST00000533069 APOBEC3DQ96AK3 386 aaPredicted RBP14.16□□□□□ -0.14
PKP3-209ENST00000533069 SOX7Q9BT81 388 aa14.16□□□□□ -0.14
PKP3-209ENST00000533069 PLCXD1Q9NUJ7 323 aa14.16□□□□□ -0.14
PKP3-209ENST00000533069 SCN3BQ9NY72 215 aa14.16□□□□□ -0.14
PKP3-209ENST00000533069 CYB5R1Q9UHQ9 305 aa14.16□□□□□ -0.14
PKP3-209ENST00000533069 PURGQ9UJV8 347 aaKnown RBP14.16□□□□□ -0.14
PKP3-209ENST00000533069 STARD10Q9Y365 291 aa14.16□□□□□ -0.14
PKP3-209ENST00000533069 RTTNQ86VV8 2226 aa14.16□□□□□ -0.14
PKP3-209ENST00000533069 SLC22A31A6NKX4 558 aa14.15□□□□□ -0.14
PKP3-209ENST00000533069 CLDN25C9JDP6 229 aa14.15□□□□□ -0.14
PKP3-209ENST00000533069 PRKYO43930 277 aa14.15□□□□□ -0.14
PKP3-209ENST00000533069 TNFAIP8O95379 198 aa14.15□□□□□ -0.14
PKP3-209ENST00000533069 CD55P08174 381 aa14.15□□□□□ -0.14
PKP3-209ENST00000533069 RAC2P15153 192 aa14.15□□□□□ -0.14
PKP3-209ENST00000533069 ZNF823P16415 610 aa14.15□□□□□ -0.14
PKP3-209ENST00000533069 C6orf141Q5SZD1 244 aa14.15□□□□□ -0.14
PKP3-209ENST00000533069 LCN1P1Q5VSP4 162 aa14.15□□□□□ -0.14
PKP3-209ENST00000533069 CORO6Q6QEF8 472 aa14.15□□□□□ -0.14
PKP3-209ENST00000533069 CXXC5Q7LFL8 322 aaKnown RBP14.15□□□□□ -0.14
PKP3-209ENST00000533069 SLC37A3Q8NCC5 494 aa14.15□□□□□ -0.14
PKP3-209ENST00000533069 CLDND2Q8NHS1 167 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms