RNA–Protein interactions for RNA: ENST00000531919.1

PATL1-202, Transcript of PAT1 homolog 1, processing body mRNA decay factor, humanhuman

TSL 5

Gene PATL1, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PATL1-202ENST00000531919 SIGLEC14Q08ET2 396 aa1.22□□□□□ -2.21
PATL1-202ENST00000531919 SRSF5Q13243 272 aaKnown RBP1.22□□□□□ -2.21
PATL1-202ENST00000531919 DGCR6Q14129 220 aa1.22□□□□□ -2.21
PATL1-202ENST00000531919 TRAM2Q15035 370 aa1.22□□□□□ -2.21
PATL1-202ENST00000531919 GCSAMLQ5JQS6 135 aa1.22□□□□□ -2.21
PATL1-202ENST00000531919 MBOAT2Q6ZWT7 520 aa1.22□□□□□ -2.21
PATL1-202ENST00000531919 SNX20Q7Z614 316 aa1.22□□□□□ -2.21
PATL1-202ENST00000531919 NKAIN4Q8IVV8 208 aa1.22□□□□□ -2.21
PATL1-202ENST00000531919 ZNF101Q8IZC7 436 aa1.22□□□□□ -2.21
PATL1-202ENST00000531919 TTLQ8NG68 377 aa1.22□□□□□ -2.21
PATL1-202ENST00000531919 LYPD6BQ8NI32 183 aa1.22□□□□□ -2.21
PATL1-202ENST00000531919 DCPSQ96C86 337 aaKnown RBP1.22□□□□□ -2.21
PATL1-202ENST00000531919 NRBF2Q96F24 287 aa1.22□□□□□ -2.21
PATL1-202ENST00000531919 C1orf198Q9H425 327 aa1.22□□□□□ -2.21
PATL1-202ENST00000531919 DHX35Q9H5Z1 703 aaKnown RBP1.22□□□□□ -2.21
PATL1-202ENST00000531919 SIGLEC1Q9BZZ2 1709 aa1.22□□□□□ -2.21
PATL1-202ENST00000531919 HMCN1Q96RW7 5635 aa1.22□□□□□ -2.21
PATL1-202ENST00000531919 KIAA1671Q9BY89 1806 aa1.22□□□□□ -2.21
PATL1-202ENST00000531919 BRCA1P38398 1863 aaKnown RBP1.21□□□□□ -2.22
PATL1-202ENST00000531919 OR5H1A6NKK0 313 aa1.21□□□□□ -2.22
PATL1-202ENST00000531919 GABRR3A8MPY1 467 aa1.21□□□□□ -2.22
PATL1-202ENST00000531919 TNFRSF11BO00300 401 aa1.21□□□□□ -2.22
PATL1-202ENST00000531919 NMT2O60551 498 aa1.21□□□□□ -2.22
PATL1-202ENST00000531919 CBR3O75828 277 aa1.21□□□□□ -2.22
PATL1-202ENST00000531919 LHBP01229 141 aa1.21□□□□□ -2.22
PATL1-202ENST00000531919 IGHV3-11P01762 117 aa1.21□□□□□ -2.22
PATL1-202ENST00000531919 IL1RNP18510 177 aa1.21□□□□□ -2.22
PATL1-202ENST00000531919 BCKDHBP21953 392 aa1.21□□□□□ -2.22
PATL1-202ENST00000531919 USF1P22415 310 aaPredicted RBP1.21□□□□□ -2.22
PATL1-202ENST00000531919 CD70P32970 193 aa1.21□□□□□ -2.22
PATL1-202ENST00000531919 ZNF121P58317 390 aaPredicted RBP1.21□□□□□ -2.22
PATL1-202ENST00000531919 EIF3EP60228 445 aaKnown RBP1.21□□□□□ -2.22
PATL1-202ENST00000531919 LIPEQ05469 1076 aa1.21□□□□□ -2.22
PATL1-202ENST00000531919 FAM53BQ14153 422 aa1.21□□□□□ -2.22
PATL1-202ENST00000531919 NCF4Q15080 339 aa1.21□□□□□ -2.22
PATL1-202ENST00000531919 HSP90AB3PQ58FF7 597 aa1.21□□□□□ -2.22
PATL1-202ENST00000531919 TEX30Q5JUR7 227 aa1.21□□□□□ -2.22
PATL1-202ENST00000531919 ARMC12Q5T9G4 340 aa1.21□□□□□ -2.22
PATL1-202ENST00000531919 AP1ARQ63HQ0 302 aa1.21□□□□□ -2.22
PATL1-202ENST00000531919 H3F3CQ6NXT2 135 aa1.21□□□□□ -2.22
PATL1-202ENST00000531919 C12orf54Q6X4T0 127 aa1.21□□□□□ -2.22
PATL1-202ENST00000531919 FAM71AQ8IYT1 594 aa1.21□□□□□ -2.22
PATL1-202ENST00000531919 ZNF645Q8N7E2 425 aa1.21□□□□□ -2.22
PATL1-202ENST00000531919 OR4C5Q8NGB2 326 aa1.21□□□□□ -2.22
PATL1-202ENST00000531919 OR4M1Q8NGD0 313 aa1.21□□□□□ -2.22
PATL1-202ENST00000531919 OR13G1Q8NGZ3 307 aa1.21□□□□□ -2.22
PATL1-202ENST00000531919 OR5K2Q8NHB8 316 aa1.21□□□□□ -2.22
PATL1-202ENST00000531919 KLF14Q8TD94 323 aaPredicted RBP1.21□□□□□ -2.22
PATL1-202ENST00000531919 NRGNQ92686 78 aa1.21□□□□□ -2.22
PATL1-202ENST00000531919 IP6K3Q96PC2 410 aa1.21□□□□□ -2.22
PATL1-202ENST00000531919 PANX1Q96RD7 426 aa1.21□□□□□ -2.22
PATL1-202ENST00000531919 TBL1YQ9BQ87 522 aa1.21□□□□□ -2.22
PATL1-202ENST00000531919 CCDC77Q9BR77 488 aa1.21□□□□□ -2.22
PATL1-202ENST00000531919 LHX5Q9H2C1 402 aa1.21□□□□□ -2.22
PATL1-202ENST00000531919 TMEM38AQ9H6F2 299 aa1.21□□□□□ -2.22
PATL1-202ENST00000531919 TMEM27Q9HBJ8 222 aa1.21□□□□□ -2.22
PATL1-202ENST00000531919 SAMSN1Q9NSI8 373 aaKnown RBP1.21□□□□□ -2.22
PATL1-202ENST00000531919 SIGLEC7Q9Y286 467 aa1.21□□□□□ -2.22
PATL1-202ENST00000531919 TRAV6A0A075B6T7 132 aa1.2□□□□□ -2.22
PATL1-202ENST00000531919 IGHV3OR16-9A0A0B4J2B5 98 aa1.2□□□□□ -2.22
PATL1-202ENST00000531919 IGHV1-69DA0A0B4J2H0 117 aa1.2□□□□□ -2.22
PATL1-202ENST00000531919 A6NDN8 102 aa1.2□□□□□ -2.22
PATL1-202ENST00000531919 PDZK1P1A8MUH7 402 aa1.2□□□□□ -2.22
PATL1-202ENST00000531919 C9JVG2 144 aa1.2□□□□□ -2.22
PATL1-202ENST00000531919 SLC9A3R1O14745 358 aaPredicted RBP1.2□□□□□ -2.22
PATL1-202ENST00000531919 ERI3O43414 337 aaKnown RBP1.2□□□□□ -2.22
PATL1-202ENST00000531919 CHST10O43529 356 aa1.2□□□□□ -2.22
PATL1-202ENST00000531919 IGLV2-8P01709 118 aa1.2□□□□□ -2.22
PATL1-202ENST00000531919 PGA4P0DJD7 388 aa1.2□□□□□ -2.22
PATL1-202ENST00000531919 PGA3P0DJD8 388 aa1.2□□□□□ -2.22
PATL1-202ENST00000531919 PGA5P0DJD9 388 aa1.2□□□□□ -2.22
PATL1-202ENST00000531919 TROVE2P10155 538 aaKnown RBP eCLIP1.2□□□□□ -2.22
PATL1-202ENST00000531919 MYL2P10916 166 aa1.2□□□□□ -2.22
PATL1-202ENST00000531919 CSNK2A2P19784 350 aaPredicted RBP1.2□□□□□ -2.22
PATL1-202ENST00000531919 NBL1P41271 181 aa1.2□□□□□ -2.22
PATL1-202ENST00000531919 SYKP43405 635 aa1.2□□□□□ -2.22
PATL1-202ENST00000531919 PRLHRP49683 370 aa1.2□□□□□ -2.22
PATL1-202ENST00000531919 ZNF266Q14584 549 aa1.2□□□□□ -2.22
PATL1-202ENST00000531919 RBMY1FQ15415 496 aaKnown RBP1.2□□□□□ -2.22
PATL1-202ENST00000531919 TAF9Q16594 264 aa1.2□□□□□ -2.22
PATL1-202ENST00000531919 MRPL55Q7Z7F7 128 aaKnown RBP1.2□□□□□ -2.22
PATL1-202ENST00000531919 GPR26Q8NDV2 337 aa1.2□□□□□ -2.22
PATL1-202ENST00000531919 OR56A4Q8NGH8 313 aa1.2□□□□□ -2.22
PATL1-202ENST00000531919 OR5AR1Q8NGP9 310 aa1.2□□□□□ -2.22
PATL1-202ENST00000531919 OR10G6Q8NH81 332 aa1.2□□□□□ -2.22
PATL1-202ENST00000531919 APH1BQ8WW43 257 aa1.2□□□□□ -2.22
PATL1-202ENST00000531919 C8orf44Q96CB5 159 aa1.2□□□□□ -2.22
PATL1-202ENST00000531919 ECHDC3Q96DC8 303 aa1.2□□□□□ -2.22
PATL1-202ENST00000531919 CDX2Q99626 313 aaPredicted RBP1.2□□□□□ -2.22
PATL1-202ENST00000531919 RSG1Q9BU20 258 aa1.2□□□□□ -2.22
PATL1-202ENST00000531919 TMEM243Q9BU79 118 aa1.2□□□□□ -2.22
PATL1-202ENST00000531919 C20orf24Q9BUV8 137 aa1.2□□□□□ -2.22
PATL1-202ENST00000531919 SLIRPQ9GZT3 109 aaKnown RBP1.2□□□□□ -2.22
PATL1-202ENST00000531919 ZSCAN16Q9H4T2 348 aaPredicted RBP1.2□□□□□ -2.22
PATL1-202ENST00000531919 ACP6Q9NPH0 428 aa1.2□□□□□ -2.22
PATL1-202ENST00000531919 MED4Q9NPJ6 270 aa1.2□□□□□ -2.22
PATL1-202ENST00000531919 C21orf62Q9NYP8 219 aa1.2□□□□□ -2.22
PATL1-202ENST00000531919 PTTG3PQ9NZH4 202 aa1.2□□□□□ -2.22
PATL1-202ENST00000531919 DHCR7Q9UBM7 475 aaKnown RBP1.2□□□□□ -2.22
PATL1-202ENST00000531919 TRMT112Q9UI30 125 aaKnown RBP1.2□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms