RNA–Protein interactions for RNA: ENST00000531873.5

CD44-234, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-234ENST00000531873 RPP21Q9H633 154 aaKnown RBP1.93□□□□□ -2.1
CD44-234ENST00000531873 EDA2RQ9HAV5 297 aa1.93□□□□□ -2.1
CD44-234ENST00000531873 NOX3Q9HBY0 568 aa1.93□□□□□ -2.1
CD44-234ENST00000531873 ZDHHC4Q9NPG8 344 aa1.93□□□□□ -2.1
CD44-234ENST00000531873 LZTFL1Q9NQ48 299 aa1.93□□□□□ -2.1
CD44-234ENST00000531873 ADAM22Q9P0K1 906 aa1.93□□□□□ -2.1
CD44-234ENST00000531873 NYAP2Q9P242 653 aa1.93□□□□□ -2.1
CD44-234ENST00000531873 CELA1Q9UNI1 258 aa1.93□□□□□ -2.1
CD44-234ENST00000531873 BZW2Q9Y6E2 419 aaKnown RBP1.93□□□□□ -2.1
CD44-234ENST00000531873 A0A096LNJ9 63 aa1.92□□□□□ -2.1
CD44-234ENST00000531873 IGHV5-51A0A0C4DH38 117 aa1.92□□□□□ -2.1
CD44-234ENST00000531873 IGKV1-8A0A0C4DH67 115 aa1.92□□□□□ -2.1
CD44-234ENST00000531873 A0A1B0GVX0 72 aa1.92□□□□□ -2.1
CD44-234ENST00000531873 GABARAPO95166 117 aa1.92□□□□□ -2.1
CD44-234ENST00000531873 SLC25A27O95847 323 aa1.92□□□□□ -2.1
CD44-234ENST00000531873 HLA-DPB1P04440 258 aa1.92□□□□□ -2.1
CD44-234ENST00000531873 BCHEP06276 602 aa1.92□□□□□ -2.1
CD44-234ENST00000531873 CTSLP07711 333 aa1.92□□□□□ -2.1
CD44-234ENST00000531873 TPM1P09493 284 aa1.92□□□□□ -2.1
CD44-234ENST00000531873 RAB3AP20336 220 aa1.92□□□□□ -2.1
CD44-234ENST00000531873 IVDP26440 423 aa1.92□□□□□ -2.1
CD44-234ENST00000531873 CD70P32970 193 aa1.92□□□□□ -2.1
CD44-234ENST00000531873 CSNK1A1P48729 337 aa1.92□□□□□ -2.1
CD44-234ENST00000531873 NDUFA8P51970 172 aa1.92□□□□□ -2.1
CD44-234ENST00000531873 ZNF133P52736 654 aaPredicted RBP1.92□□□□□ -2.1
CD44-234ENST00000531873 HADHBP55084 474 aaKnown RBP1.92□□□□□ -2.1
CD44-234ENST00000531873 RPS23P62266 143 aaKnown RBP1.92□□□□□ -2.1
CD44-234ENST00000531873 CACNG7P62955 275 aa1.92□□□□□ -2.1
CD44-234ENST00000531873 TMED1Q13445 227 aa1.92□□□□□ -2.1
CD44-234ENST00000531873 DGCR6Q14129 220 aa1.92□□□□□ -2.1
CD44-234ENST00000531873 GINS1Q14691 196 aa1.92□□□□□ -2.1
CD44-234ENST00000531873 KIR2DS1Q14954 304 aa1.92□□□□□ -2.1
CD44-234ENST00000531873 LIN9Q5TKA1 542 aa1.92□□□□□ -2.1
CD44-234ENST00000531873 METTL21CQ5VZV1 264 aa1.92□□□□□ -2.1
CD44-234ENST00000531873 OR2W3Q7Z3T1 314 aa1.92□□□□□ -2.1
CD44-234ENST00000531873 PCP2Q8IVA1 136 aa1.92□□□□□ -2.1
CD44-234ENST00000531873 CBR4Q8N4T8 237 aa1.92□□□□□ -2.1
CD44-234ENST00000531873 METTL13Q8N6R0 699 aa1.92□□□□□ -2.1
CD44-234ENST00000531873 ASCC1Q8N9N2 400 aaKnown RBP1.92□□□□□ -2.1
CD44-234ENST00000531873 SNX31Q8N9S9 440 aa1.92□□□□□ -2.1
CD44-234ENST00000531873 OR6Q1Q8NGQ2 317 aa1.92□□□□□ -2.1
CD44-234ENST00000531873 ABHD3Q8WU67 409 aa1.92□□□□□ -2.1
CD44-234ENST00000531873 SRSF12Q8WXF0 261 aaKnown RBP1.92□□□□□ -2.1
CD44-234ENST00000531873 OR8D1Q8WZ84 308 aa1.92□□□□□ -2.1
CD44-234ENST00000531873 LRRC39Q96DD0 335 aa1.92□□□□□ -2.1
CD44-234ENST00000531873 C19orf60Q96EN9 201 aa1.92□□□□□ -2.1
CD44-234ENST00000531873 BMFQ96LC9 184 aa1.92□□□□□ -2.1
CD44-234ENST00000531873 LZTS2Q9BRK4 669 aa1.92□□□□□ -2.1
CD44-234ENST00000531873 TMEM175Q9BSA9 504 aa1.92□□□□□ -2.1
CD44-234ENST00000531873 MAP1LC3CQ9BXW4 147 aa1.92□□□□□ -2.1
CD44-234ENST00000531873 TM6SF2Q9BZW4 377 aa1.92□□□□□ -2.1
CD44-234ENST00000531873 SLIRPQ9GZT3 109 aaKnown RBP1.92□□□□□ -2.1
CD44-234ENST00000531873 SPNS1Q9H2V7 528 aa1.92□□□□□ -2.1
CD44-234ENST00000531873 KIR3DX1Q9H7L2 352 aa1.92□□□□□ -2.1
CD44-234ENST00000531873 ZNF442Q9H7R0 627 aa1.92□□□□□ -2.1
CD44-234ENST00000531873 ZNF282Q9UDV7 671 aaPredicted RBP1.92□□□□□ -2.1
CD44-234ENST00000531873 ZNF257Q9Y2Q1 563 aa1.92□□□□□ -2.1
CD44-234ENST00000531873 WSB1Q9Y6I7 421 aa1.92□□□□□ -2.1
CD44-234ENST00000531873 SVILO95425 2214 aa1.92□□□□□ -2.1
CD44-234ENST00000531873 ARHGEF11O15085 1522 aa1.91□□□□□ -2.1
CD44-234ENST00000531873 RIMBP3CA6NJZ7 1639 aa1.91□□□□□ -2.1
CD44-234ENST00000531873 RIMBP3BA6NNM3 1639 aa1.91□□□□□ -2.1
CD44-234ENST00000531873 RIMBP3Q9UFD9 1639 aa1.91□□□□□ -2.1
CD44-234ENST00000531873 CARMIL3Q8ND23 1372 aa1.91□□□□□ -2.1
CD44-234ENST00000531873 PALLDQ8WX93 1383 aa1.91□□□□□ -2.1
CD44-234ENST00000531873 IGLV2-33A0A075B6J2 118 aaPredicted RBP1.91□□□□□ -2.1
CD44-234ENST00000531873 IGHV3OR16-9A0A0B4J2B5 98 aa1.91□□□□□ -2.1
CD44-234ENST00000531873 A0A0B4J2E0 115 aa1.91□□□□□ -2.1
CD44-234ENST00000531873 A0A0J9YXV3 536 aa1.91□□□□□ -2.1
CD44-234ENST00000531873 GSTTP1A0A1W2PQM5 241 aa1.91□□□□□ -2.1
CD44-234ENST00000531873 A0A1W2PRF3 423 aa1.91□□□□□ -2.1
CD44-234ENST00000531873 A0A1W2PRM7 423 aa1.91□□□□□ -2.1
CD44-234ENST00000531873 ERICH4A6NGS2 130 aa1.91□□□□□ -2.1
CD44-234ENST00000531873 CENPXA8MT69 81 aa1.91□□□□□ -2.1
CD44-234ENST00000531873 PDZK1P1A8MUH7 402 aa1.91□□□□□ -2.1
CD44-234ENST00000531873 H0Y9J4 135 aa1.91□□□□□ -2.1
CD44-234ENST00000531873 DNASE2O00115 360 aaPredicted RBP1.91□□□□□ -2.1
CD44-234ENST00000531873 CHMP2AO43633 222 aa1.91□□□□□ -2.1
CD44-234ENST00000531873 CTNSO60931 367 aa1.91□□□□□ -2.1
CD44-234ENST00000531873 OR8U9P0C7N5 309 aa1.91□□□□□ -2.1
CD44-234ENST00000531873 ADRB3P13945 408 aa1.91□□□□□ -2.1
CD44-234ENST00000531873 GFAPP14136 432 aa1.91□□□□□ -2.1
CD44-234ENST00000531873 ZNF823P16415 610 aa1.91□□□□□ -2.1
CD44-234ENST00000531873 TCP1P17987 556 aaKnown RBP1.91□□□□□ -2.1
CD44-234ENST00000531873 RAB5AP20339 215 aa1.91□□□□□ -2.1
CD44-234ENST00000531873 MYCNOSP40205 109 aa1.91□□□□□ -2.1
CD44-234ENST00000531873 HCAR3P49019 387 aa1.91□□□□□ -2.1
CD44-234ENST00000531873 P2RX1P51575 399 aa1.91□□□□□ -2.1
CD44-234ENST00000531873 SYNJ2BPP57105 145 aa1.91□□□□□ -2.1
CD44-234ENST00000531873 UBE2NP61088 152 aaKnown RBP1.91□□□□□ -2.1
CD44-234ENST00000531873 PAFAH1B2P68402 229 aa1.91□□□□□ -2.1
CD44-234ENST00000531873 ERCC8Q13216 396 aa1.91□□□□□ -2.1
CD44-234ENST00000531873 ART3Q13508 389 aa1.91□□□□□ -2.1
CD44-234ENST00000531873 STK38Q15208 465 aa1.91□□□□□ -2.1
CD44-234ENST00000531873 ZNF658BQ4V348 819 aaPredicted RBP1.91□□□□□ -2.1
CD44-234ENST00000531873 HSP90AA4PQ58FG1 418 aa1.91□□□□□ -2.1
CD44-234ENST00000531873 FBXO48Q5FWF7 155 aa1.91□□□□□ -2.1
CD44-234ENST00000531873 AVPI1Q5T686 147 aa1.91□□□□□ -2.1
CD44-234ENST00000531873 RWDD4Q6NW29 188 aaKnown RBP1.91□□□□□ -2.1
CD44-234ENST00000531873 PRMT9Q6P2P2 845 aa1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms