RNA–Protein interactions for RNA: ENST00000531243.2

PABPC4-225, Transcript of poly(A) binding protein cytoplasmic 4, human

TSL 4

Gene PABPC4, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC4-225	ENST00000531243	PIP	P12273	146 aa	Predicted RBP	18.32	■□□□□ 0.52
PABPC4-225	ENST00000531243	ZNF250	P15622	560 aa		18.32	■□□□□ 0.52
PABPC4-225	ENST00000531243	C6orf141	Q5SZD1	244 aa		18.32	■□□□□ 0.52
PABPC4-225	ENST00000531243	MBNL2	Q5VZF2	373 aa	Known RBP	18.32	■□□□□ 0.52
PABPC4-225	ENST00000531243	TMEM80	Q96HE8	168 aa		18.32	■□□□□ 0.52
PABPC4-225	ENST00000531243	TTTY10	Q9BZA0	68 aa		18.32	■□□□□ 0.52
PABPC4-225	ENST00000531243	OR2J1	Q9GZK6	312 aa		18.32	■□□□□ 0.52
PABPC4-225	ENST00000531243	OPA3	Q9H6K4	179 aa		18.32	■□□□□ 0.52
PABPC4-225	ENST00000531243	FGF20	Q9NP95	211 aa	Predicted RBP	18.32	■□□□□ 0.52
PABPC4-225	ENST00000531243	ST6GALNAC2	Q9UJ37	374 aa		18.32	■□□□□ 0.52
PABPC4-225	ENST00000531243	STARD10	Q9Y365	291 aa		18.32	■□□□□ 0.52
PABPC4-225	ENST00000531243	TPRKB	Q9Y3C4	175 aa		18.32	■□□□□ 0.52
PABPC4-225	ENST00000531243	PSMD9	O00233	223 aa		18.31	■□□□□ 0.52
PABPC4-225	ENST00000531243	TBX1	O43435	398 aa		18.31	■□□□□ 0.52
PABPC4-225	ENST00000531243	IGHA1	P01876	353 aa		18.31	■□□□□ 0.52
PABPC4-225	ENST00000531243	MT-ND5	P03915	603 aa		18.31	■□□□□ 0.52
PABPC4-225	ENST00000531243	MYL12A	P19105	171 aa		18.31	■□□□□ 0.52
PABPC4-225	ENST00000531243	ZNF121	P58317	390 aa	Predicted RBP	18.31	■□□□□ 0.52
PABPC4-225	ENST00000531243	PSMA6	P60900	246 aa	Known RBP	18.31	■□□□□ 0.52
PABPC4-225	ENST00000531243	STX19	Q8N4C7	294 aa		18.31	■□□□□ 0.52
PABPC4-225	ENST00000531243	ZNF540	Q8NDQ6	660 aa		18.31	■□□□□ 0.52
PABPC4-225	ENST00000531243	OR52I1	Q8NGK6	324 aa		18.31	■□□□□ 0.52
PABPC4-225	ENST00000531243	KLF14	Q8TD94	323 aa	Predicted RBP	18.31	■□□□□ 0.52
PABPC4-225	ENST00000531243	MARS2	Q96GW9	593 aa	Known RBP	18.31	■□□□□ 0.52
PABPC4-225	ENST00000531243	PGAM5	Q96HS1	289 aa		18.31	■□□□□ 0.52
PABPC4-225	ENST00000531243	TRAF4	Q9BUZ4	470 aa	Predicted RBP	18.31	■□□□□ 0.52
PABPC4-225	ENST00000531243	OR10A2	Q9H208	303 aa		18.31	■□□□□ 0.52
PABPC4-225	ENST00000531243	MOB1A	Q9H8S9	216 aa		18.31	■□□□□ 0.52
PABPC4-225	ENST00000531243	EXOSC1	Q9Y3B2	195 aa	Known RBP	18.31	■□□□□ 0.52
PABPC4-225	ENST00000531243	N6AMT1	Q9Y5N5	214 aa		18.31	■□□□□ 0.52
PABPC4-225	ENST00000531243	TMEM269	A0A1B0GVZ9	245 aa		18.3	■□□□□ 0.52
PABPC4-225	ENST00000531243		A0A1W2PPW3	197 aa		18.3	■□□□□ 0.52
PABPC4-225	ENST00000531243	DENR	O43583	198 aa	Known RBP	18.3	■□□□□ 0.52
PABPC4-225	ENST00000531243	RAC2	P15153	192 aa		18.3	■□□□□ 0.52
PABPC4-225	ENST00000531243	SELE	P16581	610 aa		18.3	■□□□□ 0.52
PABPC4-225	ENST00000531243	CFL1	P23528	166 aa	Known RBP	18.3	■□□□□ 0.52
PABPC4-225	ENST00000531243	LIPA	P38571	399 aa		18.3	■□□□□ 0.52
PABPC4-225	ENST00000531243	ERVS71-1	P61550	626 aa		18.3	■□□□□ 0.52
PABPC4-225	ENST00000531243	ZNF85	Q03923	595 aa		18.3	■□□□□ 0.52
PABPC4-225	ENST00000531243	GALE	Q14376	348 aa		18.3	■□□□□ 0.52
PABPC4-225	ENST00000531243	SPATA46	Q5T0L3	261 aa		18.3	■□□□□ 0.52
PABPC4-225	ENST00000531243	NAA40	Q86UY6	237 aa		18.3	■□□□□ 0.52
PABPC4-225	ENST00000531243	HAVCR2	Q8TDQ0	301 aa		18.3	■□□□□ 0.52
PABPC4-225	ENST00000531243	GGH	Q92820	318 aa		18.3	■□□□□ 0.52
PABPC4-225	ENST00000531243	ALG8	Q9BVK2	526 aa		18.3	■□□□□ 0.52
PABPC4-225	ENST00000531243	JAM3	Q9BX67	310 aa		18.3	■□□□□ 0.52
PABPC4-225	ENST00000531243	MRPL37	Q9BZE1	423 aa	Known RBP	18.3	■□□□□ 0.52
PABPC4-225	ENST00000531243	RGCC	Q9H4X1	137 aa		18.3	■□□□□ 0.52
PABPC4-225	ENST00000531243	BRD7	Q9NPI1	651 aa		18.3	■□□□□ 0.52
PABPC4-225	ENST00000531243	CGGBP1	Q9UFW8	167 aa	Predicted RBP	18.3	■□□□□ 0.52
PABPC4-225	ENST00000531243	ZNF391	Q9UJN7	358 aa		18.3	■□□□□ 0.52
PABPC4-225	ENST00000531243	BLOC1S6	Q9UL45	172 aa		18.3	■□□□□ 0.52
PABPC4-225	ENST00000531243	MYRF	Q9Y2G1	1151 aa		18.3	■□□□□ 0.52
PABPC4-225	ENST00000531243	IGLV3-9	A0A075B6K5	115 aa		18.29	■□□□□ 0.52
PABPC4-225	ENST00000531243	ERCC1	P07992	297 aa	Predicted RBP	18.29	■□□□□ 0.52
PABPC4-225	ENST00000531243	SOD3	P08294	240 aa		18.29	■□□□□ 0.52
PABPC4-225	ENST00000531243	CCDC159	P0C7I6	412 aa		18.29	■□□□□ 0.52
PABPC4-225	ENST00000531243	MMP16	P51512	607 aa		18.29	■□□□□ 0.52
PABPC4-225	ENST00000531243	MRPL28	Q13084	256 aa	Known RBP	18.29	■□□□□ 0.52
PABPC4-225	ENST00000531243	TIGD6	Q17RP2	521 aa		18.29	■□□□□ 0.52
PABPC4-225	ENST00000531243	CDON	Q4KMG0	1287 aa		18.29	■□□□□ 0.52
PABPC4-225	ENST00000531243	FBXW12	Q6X9E4	464 aa		18.29	■□□□□ 0.52
PABPC4-225	ENST00000531243	FAM57B	Q71RH2	274 aa		18.29	■□□□□ 0.52
PABPC4-225	ENST00000531243	SSX6	Q7RTT6	188 aa		18.29	■□□□□ 0.52
PABPC4-225	ENST00000531243	MRPL21	Q7Z2W9	205 aa	Known RBP	18.29	■□□□□ 0.52
PABPC4-225	ENST00000531243	RFLNB	Q8N5W9	214 aa		18.29	■□□□□ 0.52
PABPC4-225	ENST00000531243	MYDGF	Q969H8	173 aa		18.29	■□□□□ 0.52
PABPC4-225	ENST00000531243	TRMT61A	Q96FX7	289 aa	Known RBP	18.29	■□□□□ 0.52
PABPC4-225	ENST00000531243	SYT3	Q9BQG1	590 aa		18.29	■□□□□ 0.52
PABPC4-225	ENST00000531243	MS4A5	Q9H3V2	200 aa		18.29	■□□□□ 0.52
PABPC4-225	ENST00000531243	DYNLRB1	Q9NP97	96 aa		18.29	■□□□□ 0.52
PABPC4-225	ENST00000531243	CYSLTR2	Q9NS75	346 aa		18.29	■□□□□ 0.52
PABPC4-225	ENST00000531243	ERVK13-1	Q9NX77	482 aa		18.29	■□□□□ 0.52
PABPC4-225	ENST00000531243	PTTG3P	Q9NZH4	202 aa		18.29	■□□□□ 0.52
PABPC4-225	ENST00000531243	MRM2	Q9UI43	246 aa	Known RBP	18.29	■□□□□ 0.52
PABPC4-225	ENST00000531243	GNG8	Q9UK08	70 aa		18.29	■□□□□ 0.52
PABPC4-225	ENST00000531243	DIMT1	Q9UNQ2	313 aa	Known RBP	18.29	■□□□□ 0.52
PABPC4-225	ENST00000531243	SNX5	Q9Y5X3	404 aa		18.29	■□□□□ 0.52
PABPC4-225	ENST00000531243	LOC110117498-PIK3R3	F6TDL0	507 aa		18.28	■□□□□ 0.52
PABPC4-225	ENST00000531243	SLC1A7	O00341	560 aa		18.28	■□□□□ 0.52
PABPC4-225	ENST00000531243	XPNPEP2	O43895	674 aa		18.28	■□□□□ 0.52
PABPC4-225	ENST00000531243	IGHV3-13	P01766	116 aa		18.28	■□□□□ 0.52
PABPC4-225	ENST00000531243	SLC2A1	P11166	492 aa		18.28	■□□□□ 0.52
PABPC4-225	ENST00000531243	ST3GAL4	Q11206	333 aa		18.28	■□□□□ 0.52
PABPC4-225	ENST00000531243	NKPD1	Q17RQ9	610 aa		18.28	■□□□□ 0.52
PABPC4-225	ENST00000531243	SWI5	Q1ZZU3	235 aa		18.28	■□□□□ 0.52
PABPC4-225	ENST00000531243	ZMAT1	Q5H9K5	638 aa		18.28	■□□□□ 0.52
PABPC4-225	ENST00000531243	TMPRSS11A	Q6ZMR5	421 aa		18.28	■□□□□ 0.52
PABPC4-225	ENST00000531243	AHSA2	Q719I0	299 aa		18.28	■□□□□ 0.52
PABPC4-225	ENST00000531243	PGAP1	Q75T13	922 aa		18.28	■□□□□ 0.52
PABPC4-225	ENST00000531243	CDH24	Q86UP0	819 aa		18.28	■□□□□ 0.52
PABPC4-225	ENST00000531243	LHFPL3	Q86UP9	236 aa		18.28	■□□□□ 0.52
PABPC4-225	ENST00000531243	SYS1	Q8N2H4	156 aa		18.28	■□□□□ 0.52
PABPC4-225	ENST00000531243	CMBL	Q96DG6	245 aa		18.28	■□□□□ 0.52
PABPC4-225	ENST00000531243	LIME1	Q9H400	295 aa		18.28	■□□□□ 0.52
PABPC4-225	ENST00000531243	BEX4	Q9NWD9	120 aa	Predicted RBP	18.28	■□□□□ 0.52
PABPC4-225	ENST00000531243	PSORS1C1	Q9UIG5	152 aa		18.28	■□□□□ 0.52
PABPC4-225	ENST00000531243	FZR1	Q9UM11	496 aa		18.28	■□□□□ 0.52
PABPC4-225	ENST00000531243	GTF2A1L	Q9UNN4	478 aa		18.28	■□□□□ 0.52
PABPC4-225	ENST00000531243	PLEKHA6	Q9Y2H5	1048 aa		18.28	■□□□□ 0.52

Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms