RNA–Protein interactions for RNA: ENST00000531110.5

CD44-231, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 749 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-231ENST00000531110 SPIN3Q5JUX0 258 aa4.95□□□□□ -1.62
CD44-231ENST00000531110 PHYHD1Q5SRE7 291 aa4.95□□□□□ -1.62
CD44-231ENST00000531110 SAMD13Q5VXD3 122 aa4.95□□□□□ -1.62
CD44-231ENST00000531110 ZNF660Q6AZW8 331 aaPredicted RBP4.95□□□□□ -1.62
CD44-231ENST00000531110 TMEM225Q6GV28 225 aa4.95□□□□□ -1.62
CD44-231ENST00000531110 OR52W1Q6IF63 320 aa4.95□□□□□ -1.62
CD44-231ENST00000531110 LAIR2Q6ISS4 152 aa4.95□□□□□ -1.62
CD44-231ENST00000531110 STEAP1BQ6NZ63 245 aa4.95□□□□□ -1.62
CD44-231ENST00000531110 WDR88Q6ZMY6 472 aa4.95□□□□□ -1.62
CD44-231ENST00000531110 MBOAT2Q6ZWT7 520 aa4.95□□□□□ -1.62
CD44-231ENST00000531110 MON1BQ7L1V2 547 aa4.95□□□□□ -1.62
CD44-231ENST00000531110 DEFB128Q7Z7B8 93 aa4.95□□□□□ -1.62
CD44-231ENST00000531110 RIMKLAQ8IXN7 391 aa4.95□□□□□ -1.62
CD44-231ENST00000531110 LYG1Q8N1E2 194 aa4.95□□□□□ -1.62
CD44-231ENST00000531110 IQCF1Q8N6M8 205 aa4.95□□□□□ -1.62
CD44-231ENST00000531110 PI4KAP1Q8N8J0 262 aa4.95□□□□□ -1.62
CD44-231ENST00000531110 PRR26Q8N8Z3 221 aa4.95□□□□□ -1.62
CD44-231ENST00000531110 CYB561A3Q8NBI2 242 aa4.95□□□□□ -1.62
CD44-231ENST00000531110 OR11H7Q8NGC8 314 aa4.95□□□□□ -1.62
CD44-231ENST00000531110 OR10AD1Q8NGE0 317 aa4.95□□□□□ -1.62
CD44-231ENST00000531110 OR4D5Q8NGN0 318 aa4.95□□□□□ -1.62
CD44-231ENST00000531110 OR10K1Q8NGX5 313 aa4.95□□□□□ -1.62
CD44-231ENST00000531110 RPLP0P6Q8NHW5 317 aa4.95□□□□□ -1.62
CD44-231ENST00000531110 SKA2Q8WVK7 121 aaPredicted RBP4.95□□□□□ -1.62
CD44-231ENST00000531110 APH1BQ8WW43 257 aa4.95□□□□□ -1.62
CD44-231ENST00000531110 FAM151AQ8WW52 585 aa4.95□□□□□ -1.62
CD44-231ENST00000531110 SORCS1Q8WY21 1168 aa4.95□□□□□ -1.62
CD44-231ENST00000531110 SLC25A46Q96AG3 418 aa4.95□□□□□ -1.62
CD44-231ENST00000531110 FBXO17Q96EF6 278 aa4.95□□□□□ -1.62
CD44-231ENST00000531110 AKR1E2Q96JD6 320 aa4.95□□□□□ -1.62
CD44-231ENST00000531110 POM121L2Q96KW2 1035 aa4.95□□□□□ -1.62
CD44-231ENST00000531110 IL4I1Q96RQ9 567 aa4.95□□□□□ -1.62
CD44-231ENST00000531110 COPS8Q99627 209 aa4.95□□□□□ -1.62
CD44-231ENST00000531110 PITX2Q99697 317 aa4.95□□□□□ -1.62
CD44-231ENST00000531110 CCDC3Q9BQI4 270 aa4.95□□□□□ -1.62
CD44-231ENST00000531110 NRIP2Q9BQI9 281 aa4.95□□□□□ -1.62
CD44-231ENST00000531110 FNDC11Q9BVV2 318 aa4.95□□□□□ -1.62
CD44-231ENST00000531110 CDCA4Q9BXL8 241 aa4.95□□□□□ -1.62
CD44-231ENST00000531110 MS4A8Q9BY19 250 aa4.95□□□□□ -1.62
CD44-231ENST00000531110 CWH43Q9H720 699 aa4.95□□□□□ -1.62
CD44-231ENST00000531110 ZBTB20Q9HC78 741 aaPredicted RBP4.95□□□□□ -1.62
CD44-231ENST00000531110 MMP26Q9NRE1 261 aa4.95□□□□□ -1.62
CD44-231ENST00000531110 CYSLTR2Q9NS75 346 aa4.95□□□□□ -1.62
CD44-231ENST00000531110 TMEM100Q9NV29 134 aa4.95□□□□□ -1.62
CD44-231ENST00000531110 SPANXCQ9NY87 97 aa4.95□□□□□ -1.62
CD44-231ENST00000531110 TAS2R13Q9NYV9 303 aa4.95□□□□□ -1.62
CD44-231ENST00000531110 PRODH2Q9UF12 536 aa4.95□□□□□ -1.62
CD44-231ENST00000531110 VAX2Q9UIW0 290 aa4.95□□□□□ -1.62
CD44-231ENST00000531110 CD163L1Q9NR16 1453 aa4.94□□□□□ -1.62
CD44-231ENST00000531110 MICAL3Q7RTP6 2002 aa4.94□□□□□ -1.62
CD44-231ENST00000531110 LAMB2P55268 1798 aa4.94□□□□□ -1.62
CD44-231ENST00000531110 A0A096LPI6 279 aa4.94□□□□□ -1.62
CD44-231ENST00000531110 TRBV7-9A0A0J9YWB2 115 aa4.94□□□□□ -1.62
CD44-231ENST00000531110 TRBV2A0A0J9YWF9 115 aa4.94□□□□□ -1.62
CD44-231ENST00000531110 PRORSD1PA6NEY8 169 aa4.94□□□□□ -1.62
CD44-231ENST00000531110 NAP1L6A6NFF2 107 aa4.94□□□□□ -1.62
CD44-231ENST00000531110 ANKRD61A6NGH8 418 aa4.94□□□□□ -1.62
CD44-231ENST00000531110 IFITM10A6NMD0 228 aa4.94□□□□□ -1.62
CD44-231ENST00000531110 DHRS7CA6NNS2 312 aa4.94□□□□□ -1.62
CD44-231ENST00000531110 INAFM1C9JVW0 142 aa4.94□□□□□ -1.62
CD44-231ENST00000531110 CORTO00230 105 aa4.94□□□□□ -1.62
CD44-231ENST00000531110 SLC17A3O00476 420 aa4.94□□□□□ -1.62
CD44-231ENST00000531110 ADAM20O43506 726 aa4.94□□□□□ -1.62
CD44-231ENST00000531110 EIF4E2O60573 245 aaKnown RBP4.94□□□□□ -1.62
CD44-231ENST00000531110 IGHG3P01860 377 aa4.94□□□□□ -1.62
CD44-231ENST00000531110 TCRBP04435 133 aa4.94□□□□□ -1.62
CD44-231ENST00000531110 HIST1H2ABP04908 130 aa4.94□□□□□ -1.62
CD44-231ENST00000531110 IL5P05113 134 aa4.94□□□□□ -1.62
CD44-231ENST00000531110 SFTPBP07988 381 aa4.94□□□□□ -1.62
CD44-231ENST00000531110 OR5H8P0DN80 308 aa4.94□□□□□ -1.62
CD44-231ENST00000531110 CD37P11049 281 aa4.94□□□□□ -1.62
CD44-231ENST00000531110 CD22P20273 847 aa4.94□□□□□ -1.62
CD44-231ENST00000531110 MMP11P24347 488 aa4.94□□□□□ -1.62
CD44-231ENST00000531110 ACKR3P25106 362 aa4.94□□□□□ -1.62
CD44-231ENST00000531110 HTR1EP28566 365 aa4.94□□□□□ -1.62
CD44-231ENST00000531110 PIGAP37287 484 aa4.94□□□□□ -1.62
CD44-231ENST00000531110 PBX3P40426 434 aa4.94□□□□□ -1.62
CD44-231ENST00000531110 LGALS7P47929 136 aa4.94□□□□□ -1.62
CD44-231ENST00000531110 KLK7P49862 253 aa4.94□□□□□ -1.62
CD44-231ENST00000531110 HTR6P50406 440 aa4.94□□□□□ -1.62
CD44-231ENST00000531110 CRYBA4P53673 196 aa4.94□□□□□ -1.62
CD44-231ENST00000531110 CRISP1P54107 249 aa4.94□□□□□ -1.62
CD44-231ENST00000531110 BACE1P56817 501 aa4.94□□□□□ -1.62
CD44-231ENST00000531110 TMPRSS3P57727 454 aa4.94□□□□□ -1.62
CD44-231ENST00000531110 NANOS2P60321 138 aaKnown RBP4.94□□□□□ -1.62
CD44-231ENST00000531110 TBPL1P62380 186 aa4.94□□□□□ -1.62
CD44-231ENST00000531110 FABP5Q01469 135 aa4.94□□□□□ -1.62
CD44-231ENST00000531110 SRSF6Q13247 344 aaKnown RBP4.94□□□□□ -1.62
CD44-231ENST00000531110 NTRK2Q16620 822 aa4.94□□□□□ -1.62
CD44-231ENST00000531110 PRSS8Q16651 343 aa4.94□□□□□ -1.62
CD44-231ENST00000531110 TCTN1Q2MV58 587 aa4.94□□□□□ -1.62
CD44-231ENST00000531110 PRICKLE4Q2TBC4 344 aa4.94□□□□□ -1.62
CD44-231ENST00000531110 AGKQ53H12 422 aa4.94□□□□□ -1.62
CD44-231ENST00000531110 RAB6CQ53S08 254 aa4.94□□□□□ -1.62
CD44-231ENST00000531110 XKR7Q5GH72 579 aa4.94□□□□□ -1.62
CD44-231ENST00000531110 TMEM69Q5SWH9 247 aa4.94□□□□□ -1.62
CD44-231ENST00000531110 LCE1AQ5T7P2 110 aa4.94□□□□□ -1.62
CD44-231ENST00000531110 DNAJC24Q6P3W2 148 aa4.94□□□□□ -1.62
CD44-231ENST00000531110 ZNF790Q6PG37 636 aa4.94□□□□□ -1.62
CD44-231ENST00000531110 FAM131AQ6UXB0 335 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms