RNA–Protein interactions for RNA: ENST00000530748.5

CTNND1-227, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-227ENST00000530748 CXCL13O43927 109 aa7.68□□□□□ -1.18
CTNND1-227ENST00000530748 CYC1P08574 325 aa7.68□□□□□ -1.18
CTNND1-227ENST00000530748 OR13C7P0DN81 318 aa7.68□□□□□ -1.18
CTNND1-227ENST00000530748 TMEM11P17152 192 aa7.68□□□□□ -1.18
CTNND1-227ENST00000530748 SOX18P35713 384 aa7.68□□□□□ -1.18
CTNND1-227ENST00000530748 MAGEB1P43366 347 aa7.68□□□□□ -1.18
CTNND1-227ENST00000530748 AGFG1P52594 562 aaKnown RBP7.68□□□□□ -1.18
CTNND1-227ENST00000530748 RPL11P62913 178 aaKnown RBP7.68□□□□□ -1.18
CTNND1-227ENST00000530748 AGERQ15109 404 aa7.68□□□□□ -1.18
CTNND1-227ENST00000530748 HSD17B11Q8NBQ5 300 aa7.68□□□□□ -1.18
CTNND1-227ENST00000530748 SLC7A6Q92536 515 aa7.68□□□□□ -1.18
CTNND1-227ENST00000530748 UFSP2Q9NUQ7 469 aa7.68□□□□□ -1.18
CTNND1-227ENST00000530748 FLVCR1Q9Y5Y0 555 aa7.68□□□□□ -1.18
CTNND1-227ENST00000530748 ST8SIA3O43173 380 aa7.68□□□□□ -1.18
CTNND1-227ENST00000530748 FAM157BP0CG42 384 aa7.68□□□□□ -1.18
CTNND1-227ENST00000530748 ZNF121P58317 390 aaPredicted RBP7.68□□□□□ -1.18
CTNND1-227ENST00000530748 B4GALNT1Q00973 533 aa7.68□□□□□ -1.18
CTNND1-227ENST00000530748 CDK5R1Q15078 307 aa7.68□□□□□ -1.18
CTNND1-227ENST00000530748 ASTLQ6HA08 431 aaPredicted RBP7.68□□□□□ -1.18
CTNND1-227ENST00000530748 ADGRF3Q8IZF5 1079 aa7.68□□□□□ -1.18
CTNND1-227ENST00000530748 CADM4Q8NFZ8 388 aa7.68□□□□□ -1.18
CTNND1-227ENST00000530748 OR13C5Q8NGS8 318 aa7.68□□□□□ -1.18
CTNND1-227ENST00000530748 GPX8Q8TED1 209 aa7.68□□□□□ -1.18
CTNND1-227ENST00000530748 TTC9Q92623 222 aa7.68□□□□□ -1.18
CTNND1-227ENST00000530748 SOX7Q9BT81 388 aa7.68□□□□□ -1.18
CTNND1-227ENST00000530748 CRLF2Q9HC73 371 aa7.68□□□□□ -1.18
CTNND1-227ENST00000530748 LINC01387J3KSC0 135 aa7.67□□□□□ -1.18
CTNND1-227ENST00000530748 C1QBP02746 253 aa7.67□□□□□ -1.18
CTNND1-227ENST00000530748 BPIFB3P59826 476 aa7.67□□□□□ -1.18
CTNND1-227ENST00000530748 UBE2IP63279 158 aaKnown RBP7.67□□□□□ -1.18
CTNND1-227ENST00000530748 TRA2AQ13595 282 aaKnown RBP eCLIP7.67□□□□□ -1.18
CTNND1-227ENST00000530748 HLA-BQ31612 363 aa7.67□□□□□ -1.18
CTNND1-227ENST00000530748 Q6ZNX1 250 aa7.67□□□□□ -1.18
CTNND1-227ENST00000530748 TSEN54Q7Z6J9 526 aaKnown RBP7.67□□□□□ -1.18
CTNND1-227ENST00000530748 KCNRGQ8N5I3 272 aa7.67□□□□□ -1.18
CTNND1-227ENST00000530748 ANKRD53Q8N9V6 530 aa7.67□□□□□ -1.18
CTNND1-227ENST00000530748 OR10R2Q8NGX6 335 aa7.67□□□□□ -1.18
CTNND1-227ENST00000530748 APH1BQ8WW43 257 aa7.67□□□□□ -1.18
CTNND1-227ENST00000530748 SLC25A32Q9H2D1 315 aa7.67□□□□□ -1.18
CTNND1-227ENST00000530748 TMEM30AQ9NV96 361 aa7.67□□□□□ -1.18
CTNND1-227ENST00000530748 KPTNQ9Y664 436 aa7.67□□□□□ -1.18
CTNND1-227ENST00000530748 ZNF816-ZNF321PA0A0X1KG74 233 aa7.67□□□□□ -1.18
CTNND1-227ENST00000530748 SBK3P0C264 359 aa7.67□□□□□ -1.18
CTNND1-227ENST00000530748 CD1EP15812 388 aa7.67□□□□□ -1.18
CTNND1-227ENST00000530748 FUT6P51993 359 aa7.67□□□□□ -1.18
CTNND1-227ENST00000530748 OR10A3P58181 314 aa7.67□□□□□ -1.18
CTNND1-227ENST00000530748 TAS2R45P59539 299 aa7.67□□□□□ -1.18
CTNND1-227ENST00000530748 FABP5Q01469 135 aa7.67□□□□□ -1.18
CTNND1-227ENST00000530748 FLI1Q01543 452 aaPredicted RBP7.67□□□□□ -1.18
CTNND1-227ENST00000530748 HYAL1Q12794 435 aa7.67□□□□□ -1.18
CTNND1-227ENST00000530748 PNLIPRP3Q17RR3 467 aa7.67□□□□□ -1.18
CTNND1-227ENST00000530748 ACOT6Q3I5F7 207 aaPredicted RBP7.67□□□□□ -1.18
CTNND1-227ENST00000530748 RGS7BPQ6MZT1 257 aaPredicted RBP7.67□□□□□ -1.18
CTNND1-227ENST00000530748 FBXL6Q8N531 539 aa7.67□□□□□ -1.18
CTNND1-227ENST00000530748 ZNF321PQ8N8H1 164 aa7.67□□□□□ -1.18
CTNND1-227ENST00000530748 ASB13Q8WXK3 278 aa7.67□□□□□ -1.18
CTNND1-227ENST00000530748 SLC35B4Q969S0 331 aa7.67□□□□□ -1.18
CTNND1-227ENST00000530748 ZDHHC16Q969W1 377 aa7.67□□□□□ -1.18
CTNND1-227ENST00000530748 ISG20L2Q9H9L3 353 aaKnown RBP7.67□□□□□ -1.18
CTNND1-227ENST00000530748 TNFRSF12AQ9NP84 129 aa7.67□□□□□ -1.18
CTNND1-227ENST00000530748 FBXO8Q9NRD0 319 aa7.67□□□□□ -1.18
CTNND1-227ENST00000530748 FCMRO60667 390 aa7.67□□□□□ -1.18
CTNND1-227ENST00000530748 GABRA4P48169 554 aa7.67□□□□□ -1.18
CTNND1-227ENST00000530748 CLDN20P56880 219 aa7.67□□□□□ -1.18
CTNND1-227ENST00000530748 RAE1P78406 368 aaKnown RBP7.67□□□□□ -1.18
CTNND1-227ENST00000530748 ZNF468Q5VIY5 522 aaPredicted RBP7.67□□□□□ -1.18
CTNND1-227ENST00000530748 ADGRG3Q86Y34 549 aa7.67□□□□□ -1.18
CTNND1-227ENST00000530748 ZNF439Q8NDP4 499 aa7.67□□□□□ -1.18
CTNND1-227ENST00000530748 OR2A1Q8NGT9 310 aa7.67□□□□□ -1.18
CTNND1-227ENST00000530748 PRRX2Q99811 253 aa7.67□□□□□ -1.18
CTNND1-227ENST00000530748 PIGMQ9H3S5 423 aa7.67□□□□□ -1.18
CTNND1-227ENST00000530748 DLL4Q9NR61 685 aa7.67□□□□□ -1.18
CTNND1-227ENST00000530748 CACFD1Q9UGQ2 172 aa7.67□□□□□ -1.18
CTNND1-227ENST00000530748 TRAV1-2A0A0B4J238 106 aa7.67□□□□□ -1.18
CTNND1-227ENST00000530748 GABRG2P18507 467 aa7.67□□□□□ -1.18
CTNND1-227ENST00000530748 GNB2P62879 340 aa7.67□□□□□ -1.18
CTNND1-227ENST00000530748 MPPED2Q15777 294 aa7.67□□□□□ -1.18
CTNND1-227ENST00000530748 ZNF718Q3SXZ3 478 aa7.67□□□□□ -1.18
CTNND1-227ENST00000530748 TMEM179BQ7Z7N9 219 aa7.67□□□□□ -1.18
CTNND1-227ENST00000530748 SKA3Q8IX90 412 aa7.67□□□□□ -1.18
CTNND1-227ENST00000530748 OSR2Q8N2R0 312 aa7.67□□□□□ -1.18
CTNND1-227ENST00000530748 ZNF485Q8NCK3 441 aa7.67□□□□□ -1.18
CTNND1-227ENST00000530748 GNPNAT1Q96EK6 184 aaPredicted RBP7.67□□□□□ -1.18
CTNND1-227ENST00000530748 PATZ1Q9HBE1 687 aaKnown RBP7.67□□□□□ -1.18
CTNND1-227ENST00000530748 MED29Q9NX70 200 aa7.67□□□□□ -1.18
CTNND1-227ENST00000530748 SLC23A1Q9UHI7 598 aa7.67□□□□□ -1.18
CTNND1-227ENST00000530748 CRYAAP02489 173 aa7.67□□□□□ -1.18
CTNND1-227ENST00000530748 HOXC4P09017 264 aaPredicted RBP7.67□□□□□ -1.18
CTNND1-227ENST00000530748 NDUFA6P56556 154 aa7.67□□□□□ -1.18
CTNND1-227ENST00000530748 TMEM41BQ5BJD5 291 aa7.67□□□□□ -1.18
CTNND1-227ENST00000530748 TCTN3Q6NUS6 607 aa7.67□□□□□ -1.18
CTNND1-227ENST00000530748 SFT2D1Q8WV19 159 aa7.67□□□□□ -1.18
CTNND1-227ENST00000530748 PELI1Q96FA3 418 aa7.67□□□□□ -1.18
CTNND1-227ENST00000530748 FAM173AQ9BQD7 235 aa7.67□□□□□ -1.18
CTNND1-227ENST00000530748 B9D1Q9UPM9 204 aa7.67□□□□□ -1.18
CTNND1-227ENST00000530748 SERTM1A2A2V5 107 aa7.66□□□□□ -1.18
CTNND1-227ENST00000530748 H2AFB1P0C5Y9 115 aa7.66□□□□□ -1.18
CTNND1-227ENST00000530748 CTRB1P17538 263 aa7.66□□□□□ -1.18
CTNND1-227ENST00000530748 HAAOP46952 286 aa7.66□□□□□ -1.18
CTNND1-227ENST00000530748 INSM1Q01101 510 aaPredicted RBP7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms