RNA–Protein interactions for RNA: ENST00000530339.1

PCDHA4-203, Transcript of protocadherin alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA4, Length 5,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-203ENST00000530339 SPINT2O43291 252 aa14□□□□□ -0.17
PCDHA4-203ENST00000530339 SRFP11831 508 aa14□□□□□ -0.17
PCDHA4-203ENST00000530339 RBP2P50120 134 aa14□□□□□ -0.17
PCDHA4-203ENST00000530339 RAE1P78406 368 aaKnown RBP14□□□□□ -0.17
PCDHA4-203ENST00000530339 OR5M8Q8NGP6 311 aa14□□□□□ -0.17
PCDHA4-203ENST00000530339 OR2A1Q8NGT9 310 aa14□□□□□ -0.17
PCDHA4-203ENST00000530339 DAZAP1Q96EP5 407 aaKnown RBP14□□□□□ -0.17
PCDHA4-203ENST00000530339 IFT22Q9H7X7 185 aa14□□□□□ -0.17
PCDHA4-203ENST00000530339 SLC22A13Q9Y226 551 aa14□□□□□ -0.17
PCDHA4-203ENST00000530339 TIMM10BQ9Y5J6 103 aa14□□□□□ -0.17
PCDHA4-203ENST00000530339 C11orf87Q6NUJ2 197 aa14□□□□□ -0.17
PCDHA4-203ENST00000530339 CD300LDQ6UXZ3 194 aa14□□□□□ -0.17
PCDHA4-203ENST00000530339 DMBX1Q8NFW5 382 aa14□□□□□ -0.17
PCDHA4-203ENST00000530339 SLC17A2O00624 439 aa13.99□□□□□ -0.17
PCDHA4-203ENST00000530339 TO15178 435 aa13.99□□□□□ -0.17
PCDHA4-203ENST00000530339 TXNDC12O95881 172 aa13.99□□□□□ -0.17
PCDHA4-203ENST00000530339 WNT1P04628 370 aa13.99□□□□□ -0.17
PCDHA4-203ENST00000530339 TOMM34Q15785 309 aaPredicted RBP13.99□□□□□ -0.17
PCDHA4-203ENST00000530339 ELFN2Q5R3F8 820 aa13.99□□□□□ -0.17
PCDHA4-203ENST00000530339 RPUSD3Q6P087 351 aaKnown RBP13.99□□□□□ -0.17
PCDHA4-203ENST00000530339 SLC38A9Q8NBW4 561 aa13.99□□□□□ -0.17
PCDHA4-203ENST00000530339 TTC9Q92623 222 aa13.99□□□□□ -0.17
PCDHA4-203ENST00000530339 APH1AQ96BI3 265 aa13.99□□□□□ -0.17
PCDHA4-203ENST00000530339 ARSGQ96EG1 525 aa13.99□□□□□ -0.17
PCDHA4-203ENST00000530339 BARHL1Q9BZE3 327 aa13.99□□□□□ -0.17
PCDHA4-203ENST00000530339 ADAM19Q9H013 955 aa13.99□□□□□ -0.17
PCDHA4-203ENST00000530339 SLC6A17Q9H1V8 727 aa13.99□□□□□ -0.17
PCDHA4-203ENST00000530339 PRSS37A4D1T9 235 aa13.99□□□□□ -0.17
PCDHA4-203ENST00000530339 H7BYZ3 331 aa13.99□□□□□ -0.17
PCDHA4-203ENST00000530339 PRRG2O14669 202 aa13.99□□□□□ -0.17
PCDHA4-203ENST00000530339 AKR7A3O95154 331 aa13.99□□□□□ -0.17
PCDHA4-203ENST00000530339 GLAP06280 429 aa13.99□□□□□ -0.17
PCDHA4-203ENST00000530339 OR1D5P58170 312 aa13.99□□□□□ -0.17
PCDHA4-203ENST00000530339 OXGR1Q96P68 337 aa13.99□□□□□ -0.17
PCDHA4-203ENST00000530339 RTL8AQ9BWD3 113 aa13.99□□□□□ -0.17
PCDHA4-203ENST00000530339 GNG12Q9UBI6 72 aa13.99□□□□□ -0.17
PCDHA4-203ENST00000530339 FLVCR1Q9Y5Y0 555 aa13.99□□□□□ -0.17
PCDHA4-203ENST00000530339 SNCAP37840 140 aa13.99□□□□□ -0.17
PCDHA4-203ENST00000530339 CCL11P51671 97 aa13.99□□□□□ -0.17
PCDHA4-203ENST00000530339 C21orf58P58505 322 aa13.99□□□□□ -0.17
PCDHA4-203ENST00000530339 TMEM31Q5JXX7 168 aa13.99□□□□□ -0.17
PCDHA4-203ENST00000530339 NKAIN2Q5VXU1 208 aa13.99□□□□□ -0.17
PCDHA4-203ENST00000530339 C6orf15Q6UXA7 325 aaPredicted RBP13.99□□□□□ -0.17
PCDHA4-203ENST00000530339 TFAP2EQ6VUC0 442 aa13.99□□□□□ -0.17
PCDHA4-203ENST00000530339 GPR32P1Q8NGA4 272 aa13.99□□□□□ -0.17
PCDHA4-203ENST00000530339 HAO2Q9NYQ3 351 aa13.99□□□□□ -0.17
PCDHA4-203ENST00000530339 SLC5A6Q9Y289 635 aa13.99□□□□□ -0.17
PCDHA4-203ENST00000530339 TPPPO94811 219 aa13.99□□□□□ -0.17
PCDHA4-203ENST00000530339 NXPH2O95156 264 aa13.99□□□□□ -0.17
PCDHA4-203ENST00000530339 SSTP61278 116 aa13.99□□□□□ -0.17
PCDHA4-203ENST00000530339 GSG1Q2KHT4 349 aa13.99□□□□□ -0.17
PCDHA4-203ENST00000530339 TMEM71Q6P5X7 295 aa13.99□□□□□ -0.17
PCDHA4-203ENST00000530339 BHLHA9Q7RTU4 235 aa13.99□□□□□ -0.17
PCDHA4-203ENST00000530339 TECTBQ96PL2 329 aa13.99□□□□□ -0.17
PCDHA4-203ENST00000530339 PLEKHB1Q9UF11 243 aaPredicted RBP13.99□□□□□ -0.17
PCDHA4-203ENST00000530339 STRCQ7RTU9 1775 aa13.99□□□□□ -0.17
PCDHA4-203ENST00000530339 PAPPA2Q9BXP8 1791 aa13.99□□□□□ -0.17
PCDHA4-203ENST00000530339 NKX6-3A6NJ46 265 aa13.99□□□□□ -0.17
PCDHA4-203ENST00000530339 SDCBPO00560 298 aaPredicted RBP13.99□□□□□ -0.17
PCDHA4-203ENST00000530339 GABRA2P47869 451 aa13.99□□□□□ -0.17
PCDHA4-203ENST00000530339 BAMBIQ13145 260 aa13.99□□□□□ -0.17
PCDHA4-203ENST00000530339 HLXQ14774 488 aaPredicted RBP13.99□□□□□ -0.17
PCDHA4-203ENST00000530339 PRTGQ2VWP7 1150 aa13.99□□□□□ -0.17
PCDHA4-203ENST00000530339 C9orf135Q5VTT2 229 aa13.99□□□□□ -0.17
PCDHA4-203ENST00000530339 SPICQ8N5J4 248 aa13.99□□□□□ -0.17
PCDHA4-203ENST00000530339 OR52N5Q8NH56 324 aa13.99□□□□□ -0.17
PCDHA4-203ENST00000530339 BCL7CQ8WUZ0 217 aaPredicted RBP13.99□□□□□ -0.17
PCDHA4-203ENST00000530339 TMEM9BQ9NQ34 198 aa13.99□□□□□ -0.17
PCDHA4-203ENST00000530339 C20orf202A1L168 122 aa13.98□□□□□ -0.17
PCDHA4-203ENST00000530339 XRCC2O43543 280 aa13.98□□□□□ -0.17
PCDHA4-203ENST00000530339 CEACAM5P06731 702 aa13.98□□□□□ -0.17
PCDHA4-203ENST00000530339 TMPRSS11FQ6ZWK6 438 aa13.98□□□□□ -0.17
PCDHA4-203ENST00000530339 EMC6Q9BV81 110 aa13.98□□□□□ -0.17
PCDHA4-203ENST00000530339 POLDIP2Q9Y2S7 368 aa13.98□□□□□ -0.17
PCDHA4-203ENST00000530339 DOCK1Q14185 1865 aa13.98□□□□□ -0.17
PCDHA4-203ENST00000530339 F6UZH7 168 aa13.98□□□□□ -0.17
PCDHA4-203ENST00000530339 GSTP1P09211 210 aaKnown RBP13.98□□□□□ -0.17
PCDHA4-203ENST00000530339 PI3P19957 117 aa13.98□□□□□ -0.17
PCDHA4-203ENST00000530339 ARR3P36575 388 aa13.98□□□□□ -0.17
PCDHA4-203ENST00000530339 RPS23P62266 143 aaKnown RBP13.98□□□□□ -0.17
PCDHA4-203ENST00000530339 PDZD11Q5EBL8 140 aa13.98□□□□□ -0.17
PCDHA4-203ENST00000530339 IL34Q6ZMJ4 242 aa13.98□□□□□ -0.17
PCDHA4-203ENST00000530339 MAMSTRQ6ZN01 415 aa13.98□□□□□ -0.17
PCDHA4-203ENST00000530339 C15orf54Q8N8G6 183 aa13.98□□□□□ -0.17
PCDHA4-203ENST00000530339 ZNF764Q96H86 408 aaPredicted RBP13.98□□□□□ -0.17
PCDHA4-203ENST00000530339 C6orf106Q9H6K1 298 aaPredicted RBP13.98□□□□□ -0.17
PCDHA4-203ENST00000530339 SLC17A5Q9NRA2 495 aa13.98□□□□□ -0.17
PCDHA4-203ENST00000530339 RNF150Q9ULK6 438 aa13.98□□□□□ -0.17
PCDHA4-203ENST00000530339 TUSC2O75896 110 aa13.98□□□□□ -0.17
PCDHA4-203ENST00000530339 SCAND1P57086 179 aa13.98□□□□□ -0.17
PCDHA4-203ENST00000530339 RHOFQ9HBH0 211 aa13.98□□□□□ -0.17
PCDHA4-203ENST00000530339 GNB3P16520 340 aa13.98□□□□□ -0.17
PCDHA4-203ENST00000530339 HOXA1P49639 335 aaPredicted RBP13.98□□□□□ -0.17
PCDHA4-203ENST00000530339 HAGHQ16775 308 aa13.98□□□□□ -0.17
PCDHA4-203ENST00000530339 AGBL4Q5VU57 503 aa13.98□□□□□ -0.17
PCDHA4-203ENST00000530339 KIRREL2Q6UWL6 708 aa13.98□□□□□ -0.17
PCDHA4-203ENST00000530339 ARHGEF39Q8N4T4 335 aa13.98□□□□□ -0.17
PCDHA4-203ENST00000530339 ZNF439Q8NDP4 499 aa13.98□□□□□ -0.17
PCDHA4-203ENST00000530339 CPEB3Q8NE35 698 aaKnown RBP13.98□□□□□ -0.17
PCDHA4-203ENST00000530339 HPSE2Q8WWQ2 592 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms