RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 MTFP1Q9UDX5 166 aa13.03□□□□□ -0.32
ECHDC1-220ENST00000528402 IL17BQ9UHF5 180 aa13.03□□□□□ -0.32
ECHDC1-220ENST00000528402 SLC5A6Q9Y289 635 aa13.03□□□□□ -0.32
ECHDC1-220ENST00000528402 BDP1A6H8Y1 2624 aa13.02□□□□□ -0.32
ECHDC1-220ENST00000528402 CIB4A0PJX0 185 aa13.02□□□□□ -0.33
ECHDC1-220ENST00000528402 DCDC2BA2VCK2 349 aa13.02□□□□□ -0.33
ECHDC1-220ENST00000528402 C7orf66A4D0T2 115 aa13.02□□□□□ -0.33
ECHDC1-220ENST00000528402 PINLYPA6NC86 204 aa13.02□□□□□ -0.33
ECHDC1-220ENST00000528402 CDRT15L2A8MXV6 281 aa13.02□□□□□ -0.33
ECHDC1-220ENST00000528402 H3BSH0 61 aa13.02□□□□□ -0.33
ECHDC1-220ENST00000528402 NME2P1O60361 137 aa13.02□□□□□ -0.33
ECHDC1-220ENST00000528402 MTRF1O75570 445 aaKnown RBP13.02□□□□□ -0.33
ECHDC1-220ENST00000528402 SYNGR4O95473 234 aa13.02□□□□□ -0.33
ECHDC1-220ENST00000528402 SP1P08047 785 aa13.02□□□□□ -0.33
ECHDC1-220ENST00000528402 H2AFB2P0C5Z0 115 aa13.02□□□□□ -0.33
ECHDC1-220ENST00000528402 PSMB1P20618 241 aaKnown RBP13.02□□□□□ -0.33
ECHDC1-220ENST00000528402 NME2P22392 152 aa13.02□□□□□ -0.33
ECHDC1-220ENST00000528402 OTX1P32242 354 aaPredicted RBP13.02□□□□□ -0.33
ECHDC1-220ENST00000528402 CLDN15P56746 228 aa13.02□□□□□ -0.33
ECHDC1-220ENST00000528402 SPOCK1Q08629 439 aa13.02□□□□□ -0.33
ECHDC1-220ENST00000528402 SCRN3Q0VDG4 424 aa13.02□□□□□ -0.33
ECHDC1-220ENST00000528402 ZFP69Q49AA0 526 aa13.02□□□□□ -0.33
ECHDC1-220ENST00000528402 Q6ZSR3 168 aa13.02□□□□□ -0.33
ECHDC1-220ENST00000528402 GALNT16Q8N428 558 aa13.02□□□□□ -0.33
ECHDC1-220ENST00000528402 OR8B12Q8NGG6 310 aa13.02□□□□□ -0.33
ECHDC1-220ENST00000528402 OR1J2Q8NGS2 313 aa13.02□□□□□ -0.33
ECHDC1-220ENST00000528402 OR51E1Q8TCB6 317 aa13.02□□□□□ -0.33
ECHDC1-220ENST00000528402 SCMH1Q96GD3 660 aa13.02□□□□□ -0.33
ECHDC1-220ENST00000528402 PGAM5Q96HS1 289 aa13.02□□□□□ -0.33
ECHDC1-220ENST00000528402 SIGLEC12Q96PQ1 595 aa13.02□□□□□ -0.33
ECHDC1-220ENST00000528402 LINC00470Q9BZP3 86 aa13.02□□□□□ -0.33
ECHDC1-220ENST00000528402 ATG5Q9H1Y0 275 aa13.02□□□□□ -0.33
ECHDC1-220ENST00000528402 ACKR4Q9NPB9 350 aa13.02□□□□□ -0.33
ECHDC1-220ENST00000528402 NCKAP5O14513 1909 aa13.01□□□□□ -0.33
ECHDC1-220ENST00000528402 A0A0B4J293 547 aa13.01□□□□□ -0.33
ECHDC1-220ENST00000528402 OR5H15A6NDH6 313 aa13.01□□□□□ -0.33
ECHDC1-220ENST00000528402 ACTL6AO96019 429 aa13.01□□□□□ -0.33
ECHDC1-220ENST00000528402 IGLV3-1P01715 115 aa13.01□□□□□ -0.33
ECHDC1-220ENST00000528402 FTH1P19P0C7X4 201 aa13.01□□□□□ -0.33
ECHDC1-220ENST00000528402 STARP49675 285 aa13.01□□□□□ -0.33
ECHDC1-220ENST00000528402 ACTBP60709 375 aa13.01□□□□□ -0.33
ECHDC1-220ENST00000528402 ACTG1P63261 375 aa13.01□□□□□ -0.33
ECHDC1-220ENST00000528402 PLGLB1Q02325 96 aa13.01□□□□□ -0.33
ECHDC1-220ENST00000528402 RAB35Q15286 201 aa13.01□□□□□ -0.33
ECHDC1-220ENST00000528402 CCDC92Q53HC0 331 aaPredicted RBP13.01□□□□□ -0.33
ECHDC1-220ENST00000528402 ABHD12BQ7Z5M8 362 aaPredicted RBP13.01□□□□□ -0.33
ECHDC1-220ENST00000528402 MDS2Q8NDY4 140 aa13.01□□□□□ -0.33
ECHDC1-220ENST00000528402 OR52H1Q8NGJ2 320 aa13.01□□□□□ -0.33
ECHDC1-220ENST00000528402 HAS2Q92819 552 aa13.01□□□□□ -0.33
ECHDC1-220ENST00000528402 TTTY12Q9BZ98 90 aa13.01□□□□□ -0.33
ECHDC1-220ENST00000528402 AUNIPQ9H7T9 357 aa13.01□□□□□ -0.33
ECHDC1-220ENST00000528402 PARD6AQ9NPB6 346 aa13.01□□□□□ -0.33
ECHDC1-220ENST00000528402 NUDT15Q9NV35 164 aa13.01□□□□□ -0.33
ECHDC1-220ENST00000528402 TMEM38BQ9NVV0 291 aa13.01□□□□□ -0.33
ECHDC1-220ENST00000528402 ZNF391Q9UJN7 358 aa13.01□□□□□ -0.33
ECHDC1-220ENST00000528402 ITGB1BP2Q9UKP3 347 aa13.01□□□□□ -0.33
ECHDC1-220ENST00000528402 GPR179Q6PRD1 2367 aa13.01□□□□□ -0.33
ECHDC1-220ENST00000528402 NCOA6Q14686 2063 aaPredicted RBP13□□□□□ -0.33
ECHDC1-220ENST00000528402 TRAV18A0A075B6X5 111 aa13□□□□□ -0.33
ECHDC1-220ENST00000528402 DHRS7CA6NNS2 312 aa13□□□□□ -0.33
ECHDC1-220ENST00000528402 UBBP0CG47 229 aa13□□□□□ -0.33
ECHDC1-220ENST00000528402 THBS4P35443 961 aa13□□□□□ -0.33
ECHDC1-220ENST00000528402 LHX2P50458 406 aa13□□□□□ -0.33
ECHDC1-220ENST00000528402 KCNJ8Q15842 424 aa13□□□□□ -0.33
ECHDC1-220ENST00000528402 RNASE12Q5GAN4 147 aaKnown RBP13□□□□□ -0.33
ECHDC1-220ENST00000528402 CD276Q5ZPR3 534 aa13□□□□□ -0.33
ECHDC1-220ENST00000528402 DRAM2Q6UX65 266 aa13□□□□□ -0.33
ECHDC1-220ENST00000528402 FAM57BQ71RH2 274 aa13□□□□□ -0.33
ECHDC1-220ENST00000528402 OR2W3Q7Z3T1 314 aa13□□□□□ -0.33
ECHDC1-220ENST00000528402 GLCCI1Q86VQ1 547 aa13□□□□□ -0.33
ECHDC1-220ENST00000528402 COMMD2Q86X83 199 aa13□□□□□ -0.33
ECHDC1-220ENST00000528402 LIX1LQ8IVB5 337 aa13□□□□□ -0.33
ECHDC1-220ENST00000528402 OR51A2Q8NGJ7 313 aa13□□□□□ -0.33
ECHDC1-220ENST00000528402 PP6455Q8WZ26 134 aa13□□□□□ -0.33
ECHDC1-220ENST00000528402 ROBO4Q8WZ75 1007 aa13□□□□□ -0.33
ECHDC1-220ENST00000528402 ITFG2Q969R8 447 aa13□□□□□ -0.33
ECHDC1-220ENST00000528402 FAM46BQ96A09 425 aa13□□□□□ -0.33
ECHDC1-220ENST00000528402 ADAT3Q96EY9 351 aaPredicted RBP13□□□□□ -0.33
ECHDC1-220ENST00000528402 MED30Q96HR3 178 aa13□□□□□ -0.33
ECHDC1-220ENST00000528402 IRF2BPLQ9H1B7 796 aa13□□□□□ -0.33
ECHDC1-220ENST00000528402 MED28Q9H204 178 aa13□□□□□ -0.33
ECHDC1-220ENST00000528402 OR10A2Q9H208 303 aa13□□□□□ -0.33
ECHDC1-220ENST00000528402 GPR84Q9NQS5 396 aa13□□□□□ -0.33
ECHDC1-220ENST00000528402 PLEK2Q9NYT0 353 aa13□□□□□ -0.33
ECHDC1-220ENST00000528402 GHRLQ9UBU3 117 aa13□□□□□ -0.33
ECHDC1-220ENST00000528402 KLK11Q9UBX7 282 aa13□□□□□ -0.33
ECHDC1-220ENST00000528402 MCTS1Q9ULC4 181 aaKnown RBP13□□□□□ -0.33
ECHDC1-220ENST00000528402 TIMM10BQ9Y5J6 103 aa13□□□□□ -0.33
ECHDC1-220ENST00000528402 N6AMT1Q9Y5N5 214 aa13□□□□□ -0.33
ECHDC1-220ENST00000528402 MED12Q93074 2177 aa12.99□□□□□ -0.33
ECHDC1-220ENST00000528402 ZNF724A8MTY0 619 aa12.99□□□□□ -0.33
ECHDC1-220ENST00000528402 FARS2O95363 451 aaKnown RBP12.99□□□□□ -0.33
ECHDC1-220ENST00000528402 MT-ND4P03905 459 aa12.99□□□□□ -0.33
ECHDC1-220ENST00000528402 YES1P07947 543 aa12.99□□□□□ -0.33
ECHDC1-220ENST00000528402 CHRM2P08172 466 aa12.99□□□□□ -0.33
ECHDC1-220ENST00000528402 ZNF708P17019 499 aa12.99□□□□□ -0.33
ECHDC1-220ENST00000528402 ZNF93P35789 620 aaPredicted RBP12.99□□□□□ -0.33
ECHDC1-220ENST00000528402 GALK2Q01415 458 aa12.99□□□□□ -0.33
ECHDC1-220ENST00000528402 MAB21L1Q13394 359 aa12.99□□□□□ -0.33
ECHDC1-220ENST00000528402 LINC00696Q6ZRV3 163 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms