RNA–Protein interactions for RNA: ENST00000528165.5

CAPN1-214, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 2,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-214ENST00000528165 I3L1I5 382 aaPredicted RBP13.1□□□□□ -0.31
CAPN1-214ENST00000528165 K7EQS6 105 aa13.1□□□□□ -0.31
CAPN1-214ENST00000528165 M0R036 132 aa13.1□□□□□ -0.31
CAPN1-214ENST00000528165 LMX1BO60663 402 aa13.1□□□□□ -0.31
CAPN1-214ENST00000528165 IGHV2-5P01817 119 aa13.1□□□□□ -0.31
CAPN1-214ENST00000528165 OR8U8P0C7N1 319 aa13.1□□□□□ -0.31
CAPN1-214ENST00000528165 RAB5AP20339 215 aa13.1□□□□□ -0.31
CAPN1-214ENST00000528165 NPY4RP50391 375 aa13.1□□□□□ -0.31
CAPN1-214ENST00000528165 UNC119Q13432 240 aa13.1□□□□□ -0.31
CAPN1-214ENST00000528165 Q6ZRG5 221 aa13.1□□□□□ -0.31
CAPN1-214ENST00000528165 MED25Q71SY5 747 aa13.1□□□□□ -0.31
CAPN1-214ENST00000528165 FAM219AQ8IW50 185 aa13.1□□□□□ -0.31
CAPN1-214ENST00000528165 WDSUB1Q8N9V3 476 aa13.1□□□□□ -0.31
CAPN1-214ENST00000528165 OR52N5Q8NH56 324 aa13.1□□□□□ -0.31
CAPN1-214ENST00000528165 OR1E3Q8WZA6 343 aa13.1□□□□□ -0.31
CAPN1-214ENST00000528165 INTS12Q96CB8 462 aaKnown RBP13.1□□□□□ -0.31
CAPN1-214ENST00000528165 OCSTAMPQ9BR26 566 aa13.1□□□□□ -0.31
CAPN1-214ENST00000528165 PAPOLGQ9BWT3 736 aaKnown RBP13.1□□□□□ -0.31
CAPN1-214ENST00000528165 OR10A5Q9H207 317 aa13.1□□□□□ -0.31
CAPN1-214ENST00000528165 UBQLN4Q9NRR5 601 aa13.1□□□□□ -0.31
CAPN1-214ENST00000528165 GSKIPQ9P0R6 139 aa13.1□□□□□ -0.31
CAPN1-214ENST00000528165 ARID1BQ8NFD5 2236 aaPredicted RBP13.1□□□□□ -0.31
CAPN1-214ENST00000528165 A0A1W2PPH5 198 aa13.1□□□□□ -0.31
CAPN1-214ENST00000528165 SCDO00767 359 aa13.1□□□□□ -0.31
CAPN1-214ENST00000528165 ZNF264O43296 627 aa13.1□□□□□ -0.31
CAPN1-214ENST00000528165 GMFGO60234 142 aa13.1□□□□□ -0.31
CAPN1-214ENST00000528165 NDUFS6O75380 124 aaKnown RBP13.1□□□□□ -0.31
CAPN1-214ENST00000528165 SCGNO76038 276 aa13.1□□□□□ -0.31
CAPN1-214ENST00000528165 OR8U9P0C7N5 309 aa13.1□□□□□ -0.31
CAPN1-214ENST00000528165 ACKR3P25106 362 aa13.1□□□□□ -0.31
CAPN1-214ENST00000528165 PMELP40967 661 aa13.1□□□□□ -0.31
CAPN1-214ENST00000528165 ID4P47928 161 aa13.1□□□□□ -0.31
CAPN1-214ENST00000528165 FRMD1Q8N878 549 aa13.1□□□□□ -0.31
CAPN1-214ENST00000528165 OR8U1Q8NH10 309 aa13.1□□□□□ -0.31
CAPN1-214ENST00000528165 TAAR9Q96RI9 348 aa13.1□□□□□ -0.31
CAPN1-214ENST00000528165 S1PR5Q9H228 398 aa13.1□□□□□ -0.31
CAPN1-214ENST00000528165 C5orf66Q9H5L9 145 aa13.1□□□□□ -0.31
CAPN1-214ENST00000528165 TUBA4BQ9H853 241 aa13.1□□□□□ -0.31
CAPN1-214ENST00000528165 OR52A1Q9UKL2 312 aa13.1□□□□□ -0.31
CAPN1-214ENST00000528165 hCG_1809904A0A1W2PP81 198 aa13.09□□□□□ -0.31
CAPN1-214ENST00000528165 A0A1W2PR64 198 aa13.09□□□□□ -0.31
CAPN1-214ENST00000528165 A0A1W2PRV1 198 aa13.09□□□□□ -0.31
CAPN1-214ENST00000528165 GPR3P46089 330 aa13.09□□□□□ -0.31
CAPN1-214ENST00000528165 STARD6P59095 220 aa13.09□□□□□ -0.31
CAPN1-214ENST00000528165 ACKR1Q16570 336 aa13.09□□□□□ -0.31
CAPN1-214ENST00000528165 C2orf27AQ580R0 203 aa13.09□□□□□ -0.31
CAPN1-214ENST00000528165 LYPD6Q86Y78 171 aa13.09□□□□□ -0.31
CAPN1-214ENST00000528165 TMEM230Q96A57 120 aa13.09□□□□□ -0.31
CAPN1-214ENST00000528165 SLC25A36Q96CQ1 311 aa13.09□□□□□ -0.31
CAPN1-214ENST00000528165 OR10C1Q96KK4 312 aa13.09□□□□□ -0.31
CAPN1-214ENST00000528165 C2orf50Q96LR7 162 aa13.09□□□□□ -0.31
CAPN1-214ENST00000528165 TMPRSS5Q9H3S3 457 aa13.09□□□□□ -0.31
CAPN1-214ENST00000528165 GPR132Q9UNW8 380 aa13.09□□□□□ -0.31
CAPN1-214ENST00000528165 C2orf74A8MZ97 194 aa13.09□□□□□ -0.31
CAPN1-214ENST00000528165 AP4M1O00189 453 aa13.09□□□□□ -0.31
CAPN1-214ENST00000528165 LINC00271P0C7V0 271 aa13.09□□□□□ -0.31
CAPN1-214ENST00000528165 CTLA4P16410 223 aa13.09□□□□□ -0.31
CAPN1-214ENST00000528165 LAP3P28838 519 aa13.09□□□□□ -0.31
CAPN1-214ENST00000528165 GNALP38405 381 aa13.09□□□□□ -0.31
CAPN1-214ENST00000528165 RPL27P61353 136 aaKnown RBP13.09□□□□□ -0.31
CAPN1-214ENST00000528165 BTG2P78543 158 aa13.09□□□□□ -0.31
CAPN1-214ENST00000528165 INSM1Q01101 510 aaPredicted RBP13.09□□□□□ -0.31
CAPN1-214ENST00000528165 FAM78AQ5JUQ0 283 aa13.09□□□□□ -0.31
CAPN1-214ENST00000528165 FNDC7Q5VTL7 733 aa13.09□□□□□ -0.31
CAPN1-214ENST00000528165 ZNF524Q96C55 264 aa13.09□□□□□ -0.31
CAPN1-214ENST00000528165 SLC26A1Q9H2B4 701 aa13.09□□□□□ -0.31
CAPN1-214ENST00000528165 RHBDD3Q9Y3P4 386 aa13.09□□□□□ -0.31
CAPN1-214ENST00000528165 IGLV1-36A0A0B4J1U3 117 aa13.08□□□□□ -0.31
CAPN1-214ENST00000528165 PMS2P1A4D2B8 440 aa13.08□□□□□ -0.31
CAPN1-214ENST00000528165 BPNT1O95861 308 aa13.08□□□□□ -0.31
CAPN1-214ENST00000528165 CST4P01036 141 aa13.08□□□□□ -0.31
CAPN1-214ENST00000528165 ISG15P05161 165 aa13.08□□□□□ -0.31
CAPN1-214ENST00000528165 VSIG8P0DPA2 414 aa13.08□□□□□ -0.31
CAPN1-214ENST00000528165 PI3P19957 117 aa13.08□□□□□ -0.31
CAPN1-214ENST00000528165 OR2B8PP59922 312 aa13.08□□□□□ -0.31
CAPN1-214ENST00000528165 ZP2Q05996 745 aa13.08□□□□□ -0.31
CAPN1-214ENST00000528165 ADAM5Q6NVV9 412 aa13.08□□□□□ -0.31
CAPN1-214ENST00000528165 NUP54Q7Z3B4 507 aa13.08□□□□□ -0.31
CAPN1-214ENST00000528165 FOXRED2Q8IWF2 684 aa13.08□□□□□ -0.31
CAPN1-214ENST00000528165 TSACCQ96A04 125 aaPredicted RBP13.08□□□□□ -0.31
CAPN1-214ENST00000528165 IP6K3Q96PC2 410 aa13.08□□□□□ -0.31
CAPN1-214ENST00000528165 COL4A2P08572 1712 aa13.08□□□□□ -0.32
CAPN1-214ENST00000528165 POM121BA6NF01 834 aa13.08□□□□□ -0.32
CAPN1-214ENST00000528165 PRAMEF26H0Y7S4 382 aa13.08□□□□□ -0.32
CAPN1-214ENST00000528165 P2RY10O00398 339 aa13.08□□□□□ -0.32
CAPN1-214ENST00000528165 CXCR1P25024 350 aa13.08□□□□□ -0.32
CAPN1-214ENST00000528165 GSK3AP49840 483 aa13.08□□□□□ -0.32
CAPN1-214ENST00000528165 RAB2AP61019 212 aa13.08□□□□□ -0.32
CAPN1-214ENST00000528165 ANKRD55Q3KP44 614 aa13.08□□□□□ -0.32
CAPN1-214ENST00000528165 FAM160A2Q8N612 972 aaPredicted RBP13.08□□□□□ -0.32
CAPN1-214ENST00000528165 OR52N4Q8NGI2 321 aa13.08□□□□□ -0.32
CAPN1-214ENST00000528165 FGGYQ96C11 551 aa13.08□□□□□ -0.32
CAPN1-214ENST00000528165 C20orf24Q9BUV8 137 aa13.08□□□□□ -0.32
CAPN1-214ENST00000528165 G6PC2Q9NQR9 355 aa13.08□□□□□ -0.32
CAPN1-214ENST00000528165 PCOLCE2Q9UKZ9 415 aa13.08□□□□□ -0.32
CAPN1-214ENST00000528165 MEMO1Q9Y316 297 aa13.08□□□□□ -0.32
CAPN1-214ENST00000528165 TMEM269A0A1B0GVZ9 245 aa13.08□□□□□ -0.32
CAPN1-214ENST00000528165 SRSF10O75494 262 aaKnown RBP13.08□□□□□ -0.32
CAPN1-214ENST00000528165 TSPAN15O95858 294 aa13.08□□□□□ -0.32
CAPN1-214ENST00000528165 BGLAPP02818 100 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms