RNA–Protein interactions for RNA: ENST00000526204.5

VPS28-205, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 5

Gene VPS28, Length 2,120 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-205ENST00000526204 NMBP08949 121 aa18.85■□□□□ 0.61
VPS28-205ENST00000526204 VSIG8P0DPA2 414 aa18.85■□□□□ 0.61
VPS28-205ENST00000526204 TBPP20226 339 aa18.85■□□□□ 0.61
VPS28-205ENST00000526204 EPHA8P29322 1005 aaPredicted RBP18.85■□□□□ 0.61
VPS28-205ENST00000526204 SRSF4Q08170 494 aaKnown RBP18.85■□□□□ 0.61
VPS28-205ENST00000526204 HYAL4Q2M3T9 481 aa18.85■□□□□ 0.61
VPS28-205ENST00000526204 ALKAL2Q6UX46 152 aa18.85■□□□□ 0.61
VPS28-205ENST00000526204 GPAT4Q86UL3 456 aa18.85■□□□□ 0.61
VPS28-205ENST00000526204 SLC51BQ86UW2 128 aa18.85■□□□□ 0.61
VPS28-205ENST00000526204 BEST3Q8N1M1 668 aa18.85■□□□□ 0.61
VPS28-205ENST00000526204 ZDHHC22Q8N966 263 aa18.85■□□□□ 0.61
VPS28-205ENST00000526204 OR5M8Q8NGP6 311 aa18.85■□□□□ 0.61
VPS28-205ENST00000526204 WBP1Q96G27 269 aa18.85■□□□□ 0.61
VPS28-205ENST00000526204 OXGR1Q96P68 337 aa18.85■□□□□ 0.61
VPS28-205ENST00000526204 PTGES2Q9H7Z7 377 aa18.85■□□□□ 0.61
VPS28-205ENST00000526204 PLEKHA6Q9Y2H5 1048 aa18.85■□□□□ 0.61
VPS28-205ENST00000526204 SESN1Q9Y6P5 492 aa18.85■□□□□ 0.61
VPS28-205ENST00000526204 EXPH5Q8NEV8 1989 aa18.85■□□□□ 0.61
VPS28-205ENST00000526204 A0A1B0GTI1 187 aa18.85■□□□□ 0.61
VPS28-205ENST00000526204 A0A1W2PQM1 296 aa18.85■□□□□ 0.61
VPS28-205ENST00000526204 TRAF3IP2O43734 574 aaPredicted RBP18.85■□□□□ 0.61
VPS28-205ENST00000526204 CD34P28906 385 aa18.85■□□□□ 0.61
VPS28-205ENST00000526204 EIF1P41567 113 aaKnown RBP18.85■□□□□ 0.61
VPS28-205ENST00000526204 GABREP78334 506 aa18.85■□□□□ 0.61
VPS28-205ENST00000526204 CCL7P80098 99 aa18.85■□□□□ 0.61
VPS28-205ENST00000526204 TAF13Q15543 124 aa18.85■□□□□ 0.61
VPS28-205ENST00000526204 TMEM65Q6PI78 240 aa18.85■□□□□ 0.61
VPS28-205ENST00000526204 SLC25A42Q86VD7 318 aa18.85■□□□□ 0.61
VPS28-205ENST00000526204 PPP1R3BQ86XI6 285 aa18.85■□□□□ 0.61
VPS28-205ENST00000526204 OR4S1Q8NGB4 309 aa18.85■□□□□ 0.61
VPS28-205ENST00000526204 OR13C9Q8NGT0 318 aa18.85■□□□□ 0.61
VPS28-205ENST00000526204 OR51E1Q8TCB6 317 aa18.85■□□□□ 0.61
VPS28-205ENST00000526204 OR5B2Q96R09 309 aa18.85■□□□□ 0.61
VPS28-205ENST00000526204 DEFB126Q9BYW3 111 aa18.85■□□□□ 0.61
VPS28-205ENST00000526204 SDHAF2Q9NX18 166 aa18.85■□□□□ 0.61
VPS28-205ENST00000526204 MFSD2BA6NFX1 497 aa18.84■□□□□ 0.61
VPS28-205ENST00000526204 WIPF3A6NGB9 483 aa18.84■□□□□ 0.61
VPS28-205ENST00000526204 POU3F2P20265 443 aaPredicted RBP18.84■□□□□ 0.61
VPS28-205ENST00000526204 ADH6P28332 368 aa18.84■□□□□ 0.61
VPS28-205ENST00000526204 ZNF93P35789 620 aaPredicted RBP18.84■□□□□ 0.61
VPS28-205ENST00000526204 ZNF239Q16600 458 aaKnown RBP18.84■□□□□ 0.61
VPS28-205ENST00000526204 SLC25A47Q6Q0C1 308 aa18.84■□□□□ 0.61
VPS28-205ENST00000526204 ZBTB8AQ96BR9 441 aa18.84■□□□□ 0.61
VPS28-205ENST00000526204 SPACA9Q96E40 222 aaPredicted RBP18.84■□□□□ 0.61
VPS28-205ENST00000526204 REG4Q9BYZ8 158 aa18.84■□□□□ 0.61
VPS28-205ENST00000526204 HDGFL3Q9Y3E1 203 aa18.84■□□□□ 0.61
VPS28-205ENST00000526204 TRIOBPQ9H2D6 2365 aa18.84■□□□□ 0.61
VPS28-205ENST00000526204 HLA-AP01891 365 aaKnown RBP18.83■□□□□ 0.61
VPS28-205ENST00000526204 CHRM2P08172 466 aa18.83■□□□□ 0.61
VPS28-205ENST00000526204 BAMBIQ13145 260 aa18.83■□□□□ 0.61
VPS28-205ENST00000526204 KCNMB1Q16558 191 aa18.83■□□□□ 0.61
VPS28-205ENST00000526204 NKPD1Q17RQ9 610 aa18.83■□□□□ 0.61
VPS28-205ENST00000526204 AWAT2Q6E213 333 aa18.83■□□□□ 0.61
VPS28-205ENST00000526204 FAHD2BQ6P2I3 314 aaPredicted RBP18.83■□□□□ 0.61
VPS28-205ENST00000526204 PGAP1Q75T13 922 aa18.83■□□□□ 0.61
VPS28-205ENST00000526204 ZNF546Q86UE3 836 aa18.83■□□□□ 0.61
VPS28-205ENST00000526204 CD163Q86VB7 1156 aa18.83■□□□□ 0.61
VPS28-205ENST00000526204 ANGPTL5Q86XS5 388 aa18.83■□□□□ 0.61
VPS28-205ENST00000526204 COQ8AQ8NI60 647 aa18.83■□□□□ 0.61
VPS28-205ENST00000526204 FAHD2AQ96GK7 314 aa18.83■□□□□ 0.61
VPS28-205ENST00000526204 CCDC120Q96HB5 630 aa18.83■□□□□ 0.61
VPS28-205ENST00000526204 TMEM185BQ9H7F4 350 aa18.83■□□□□ 0.61
VPS28-205ENST00000526204 IFT46Q9NQC8 304 aa18.83■□□□□ 0.61
VPS28-205ENST00000526204 PFDN2Q9UHV9 154 aa18.83■□□□□ 0.61
VPS28-205ENST00000526204 GPN3Q9UHW5 284 aaPredicted RBP18.83■□□□□ 0.61
VPS28-205ENST00000526204 FBXL2Q9UKC9 423 aa18.83■□□□□ 0.61
VPS28-205ENST00000526204 A0A0D9SG52 128 aa18.83■□□□□ 0.6
VPS28-205ENST00000526204 LOC102725191A0A1B0GVB3 256 aa18.83■□□□□ 0.6
VPS28-205ENST00000526204 TMEM14DPA8MWL7 114 aa18.83■□□□□ 0.6
VPS28-205ENST00000526204 CSN2P05814 226 aa18.83■□□□□ 0.6
VPS28-205ENST00000526204 ZNF43P17038 809 aa18.83■□□□□ 0.6
VPS28-205ENST00000526204 OR2W3Q7Z3T1 314 aa18.83■□□□□ 0.6
VPS28-205ENST00000526204 OR10R2Q8NGX6 335 aa18.83■□□□□ 0.6
VPS28-205ENST00000526204 CMBLQ96DG6 245 aa18.83■□□□□ 0.6
VPS28-205ENST00000526204 RASL10BQ96S79 203 aa18.83■□□□□ 0.6
VPS28-205ENST00000526204 VSIG4Q9Y279 399 aa18.83■□□□□ 0.6
VPS28-205ENST00000526204 NOP16Q9Y3C1 178 aaKnown RBP18.83■□□□□ 0.6
VPS28-205ENST00000526204 TRAV14DV4A0A0A6YYC5 116 aa18.82■□□□□ 0.6
VPS28-205ENST00000526204 A0A1W2PNR3 127 aa18.82■□□□□ 0.6
VPS28-205ENST00000526204 HLA-GP17693 338 aa18.82■□□□□ 0.6
VPS28-205ENST00000526204 MPGP29372 298 aa18.82■□□□□ 0.6
VPS28-205ENST00000526204 HIST3H3Q16695 136 aa18.82■□□□□ 0.6
VPS28-205ENST00000526204 LYG2Q86SG7 212 aa18.82■□□□□ 0.6
VPS28-205ENST00000526204 OR4K17Q8NGC6 315 aa18.82■□□□□ 0.6
VPS28-205ENST00000526204 CCDC74BQ96LY2 380 aa18.82■□□□□ 0.6
VPS28-205ENST00000526204 LY6G6EA0A0G2JKS1 128 aa18.82■□□□□ 0.6
VPS28-205ENST00000526204 OR5H14A6NHG9 310 aa18.82■□□□□ 0.6
VPS28-205ENST00000526204 ZNF726A6NNF4 738 aa18.82■□□□□ 0.6
VPS28-205ENST00000526204 TLX3O43711 291 aaPredicted RBP18.82■□□□□ 0.6
VPS28-205ENST00000526204 DKK1O94907 266 aa18.82■□□□□ 0.6
VPS28-205ENST00000526204 OPN1LWP04000 364 aa18.82■□□□□ 0.6
VPS28-205ENST00000526204 ZP3P21754 424 aa18.82■□□□□ 0.6
VPS28-205ENST00000526204 ZBTB25P24278 435 aa18.82■□□□□ 0.6
VPS28-205ENST00000526204 FAM189A2Q15884 450 aa18.82■□□□□ 0.6
VPS28-205ENST00000526204 ZNF660Q6AZW8 331 aaPredicted RBP18.82■□□□□ 0.6
VPS28-205ENST00000526204 FADS6Q8N9I5 356 aa18.82■□□□□ 0.6
VPS28-205ENST00000526204 OR5M9Q8NGP3 310 aa18.82■□□□□ 0.6
VPS28-205ENST00000526204 PRO3102Q9H379 93 aa18.82■□□□□ 0.6
VPS28-205ENST00000526204 COMMD9Q9P000 198 aa18.82■□□□□ 0.6
VPS28-205ENST00000526204 FBXO4Q9UKT5 387 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms