RNA–Protein interactions for RNA: ENST00000526066.5

CCS-204, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 872 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-204ENST00000526066 IL17RDQ8NFM7 739 aa14.91□□□□□ -0.02
CCS-204ENST00000526066 NR1H4Q96RI1 486 aaPredicted RBP14.91□□□□□ -0.02
CCS-204ENST00000526066 TBX5Q99593 518 aa14.91□□□□□ -0.02
CCS-204ENST00000526066 ATF6BQ99941 703 aa14.91□□□□□ -0.02
CCS-204ENST00000526066 ZNF649Q9BS31 505 aa14.91□□□□□ -0.02
CCS-204ENST00000526066 CDCA4Q9BXL8 241 aa14.91□□□□□ -0.02
CCS-204ENST00000526066 ERVK13-1Q9NX77 482 aa14.91□□□□□ -0.02
CCS-204ENST00000526066 NPAP1Q9NZP6 1156 aa14.91□□□□□ -0.02
CCS-204ENST00000526066 CR1P17927 2039 aa14.9□□□□□ -0.02
CCS-204ENST00000526066 OVOL3O00110 214 aa14.9□□□□□ -0.02
CCS-204ENST00000526066 RGS10O43665 173 aa14.9□□□□□ -0.02
CCS-204ENST00000526066 SULT1C4O75897 302 aa14.9□□□□□ -0.02
CCS-204ENST00000526066 TNFAIP8O95379 198 aa14.9□□□□□ -0.02
CCS-204ENST00000526066 ADRA2AP08913 450 aa14.9□□□□□ -0.02
CCS-204ENST00000526066 LIMS3P0CW19 117 aa14.9□□□□□ -0.02
CCS-204ENST00000526066 LIMS4P0CW20 117 aa14.9□□□□□ -0.02
CCS-204ENST00000526066 OTX1P32242 354 aaPredicted RBP14.9□□□□□ -0.02
CCS-204ENST00000526066 HTR5AP47898 357 aa14.9□□□□□ -0.02
CCS-204ENST00000526066 ZNF83P51522 516 aa14.9□□□□□ -0.02
CCS-204ENST00000526066 ACTA2P62736 377 aa14.9□□□□□ -0.02
CCS-204ENST00000526066 GRB2P62993 217 aaKnown RBP14.9□□□□□ -0.02
CCS-204ENST00000526066 ACTG2P63267 376 aa14.9□□□□□ -0.02
CCS-204ENST00000526066 KRTAP27-1Q3LI81 207 aa14.9□□□□□ -0.02
CCS-204ENST00000526066 CDONQ4KMG0 1287 aa14.9□□□□□ -0.02
CCS-204ENST00000526066 ZNF684Q5T5D7 378 aa14.9□□□□□ -0.02
CCS-204ENST00000526066 PLEKHG7Q6ZR37 379 aa14.9□□□□□ -0.02
CCS-204ENST00000526066 SSX6Q7RTT6 188 aa14.9□□□□□ -0.02
CCS-204ENST00000526066 PRSS48Q7RTY5 328 aa14.9□□□□□ -0.02
CCS-204ENST00000526066 KCTD20Q7Z5Y7 419 aa14.9□□□□□ -0.02
CCS-204ENST00000526066 KRT77Q7Z794 578 aa14.9□□□□□ -0.02
CCS-204ENST00000526066 ZNF679Q8IYX0 411 aa14.9□□□□□ -0.02
CCS-204ENST00000526066 RFLNBQ8N5W9 214 aa14.9□□□□□ -0.02
CCS-204ENST00000526066 NIPAL2Q9H841 368 aa14.9□□□□□ -0.02
CCS-204ENST00000526066 CENPMQ9NSP4 180 aa14.9□□□□□ -0.02
CCS-204ENST00000526066 CHCHD3Q9NX63 227 aaKnown RBP14.9□□□□□ -0.02
CCS-204ENST00000526066 IGHV1-18A0A0C4DH31 117 aa14.89□□□□□ -0.03
CCS-204ENST00000526066 PRR32B1ATL7 298 aa14.89□□□□□ -0.03
CCS-204ENST00000526066 KRT8P05787 483 aa14.89□□□□□ -0.03
CCS-204ENST00000526066 SOD3P08294 240 aa14.89□□□□□ -0.03
CCS-204ENST00000526066 H2BFMP0C1H6 154 aa14.89□□□□□ -0.03
CCS-204ENST00000526066 CECR9P0C854 216 aa14.89□□□□□ -0.03
CCS-204ENST00000526066 STOMP27105 288 aa14.89□□□□□ -0.03
CCS-204ENST00000526066 APEX1P27695 318 aaKnown RBP14.89□□□□□ -0.03
CCS-204ENST00000526066 C21orf33P30042 268 aaPredicted RBP14.89□□□□□ -0.03
CCS-204ENST00000526066 DCTDP32321 178 aa14.89□□□□□ -0.03
CCS-204ENST00000526066 APLNRP35414 380 aa14.89□□□□□ -0.03
CCS-204ENST00000526066 ETV1P50549 477 aa14.89□□□□□ -0.03
CCS-204ENST00000526066 MVKQ03426 396 aa14.89□□□□□ -0.03
CCS-204ENST00000526066 ZNF672Q499Z4 452 aaPredicted RBP14.89□□□□□ -0.03
CCS-204ENST00000526066 NCMAPQ5T1S8 102 aa14.89□□□□□ -0.03
CCS-204ENST00000526066 TMEM108Q6UXF1 575 aa14.89□□□□□ -0.03
CCS-204ENST00000526066 LRRN1Q6UXK5 716 aa14.89□□□□□ -0.03
CCS-204ENST00000526066 LHFPL3Q86UP9 236 aa14.89□□□□□ -0.03
CCS-204ENST00000526066 SYS1Q8N2H4 156 aa14.89□□□□□ -0.03
CCS-204ENST00000526066 SLC30A7Q8NEW0 376 aa14.89□□□□□ -0.03
CCS-204ENST00000526066 OR1J2Q8NGS2 313 aa14.89□□□□□ -0.03
CCS-204ENST00000526066 SNX33Q8WV41 574 aa14.89□□□□□ -0.03
CCS-204ENST00000526066 SGCDQ92629 289 aa14.89□□□□□ -0.03
CCS-204ENST00000526066 MS4A3Q96HJ5 214 aa14.89□□□□□ -0.03
CCS-204ENST00000526066 POM121L2Q96KW2 1035 aa14.89□□□□□ -0.03
CCS-204ENST00000526066 DCLRE1CQ96SD1 692 aaKnown RBP14.89□□□□□ -0.03
CCS-204ENST00000526066 KCNJ15Q99712 375 aa14.89□□□□□ -0.03
CCS-204ENST00000526066 ALG8Q9BVK2 526 aa14.89□□□□□ -0.03
CCS-204ENST00000526066 C1QTNF6Q9BXI9 259 aa14.89□□□□□ -0.03
CCS-204ENST00000526066 MROQ9BYG7 248 aa14.89□□□□□ -0.03
CCS-204ENST00000526066 SLCO1C1Q9NYB5 712 aa14.89□□□□□ -0.03
CCS-204ENST00000526066 ERVK-18Q9QC07 812 aa14.89□□□□□ -0.03
CCS-204ENST00000526066 CDC42EP3Q9UKI2 254 aa14.89□□□□□ -0.03
CCS-204ENST00000526066 IKZF2Q9UKS7 526 aa14.89□□□□□ -0.03
CCS-204ENST00000526066 CAB39Q9Y376 341 aaPredicted RBP14.89□□□□□ -0.03
CCS-204ENST00000526066 TMEM129A0AVI4 362 aa14.88□□□□□ -0.03
CCS-204ENST00000526066 ABHD16AO95870 558 aa14.88□□□□□ -0.03
CCS-204ENST00000526066 CELA3BP08861 270 aa14.88□□□□□ -0.03
CCS-204ENST00000526066 HTR1AP08908 422 aa14.88□□□□□ -0.03
CCS-204ENST00000526066 DANCRP0C864 163 aa14.88□□□□□ -0.03
CCS-204ENST00000526066 EEF1B2P24534 225 aaKnown RBP14.88□□□□□ -0.03
CCS-204ENST00000526066 PTAFRP25105 342 aa14.88□□□□□ -0.03
CCS-204ENST00000526066 GDI2P50395 445 aaKnown RBP14.88□□□□□ -0.03
CCS-204ENST00000526066 IRF3Q14653 427 aa14.88□□□□□ -0.03
CCS-204ENST00000526066 TAF13Q15543 124 aa14.88□□□□□ -0.03
CCS-204ENST00000526066 TBC1D28Q2M2D7 210 aa14.88□□□□□ -0.03
CCS-204ENST00000526066 RSPO1Q2MKA7 263 aaPredicted RBP14.88□□□□□ -0.03
CCS-204ENST00000526066 MYPOPQ86VE0 399 aaPredicted RBP14.88□□□□□ -0.03
CCS-204ENST00000526066 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.88□□□□□ -0.03
CCS-204ENST00000526066 OR52N1Q8NH53 320 aa14.88□□□□□ -0.03
CCS-204ENST00000526066 SPTSSAQ969W0 71 aa14.88□□□□□ -0.03
CCS-204ENST00000526066 ZNF696Q9H7X3 374 aa14.88□□□□□ -0.03
CCS-204ENST00000526066 ELOVL3Q9HB03 270 aa14.88□□□□□ -0.03
CCS-204ENST00000526066 MRM2Q9UI43 246 aaKnown RBP14.88□□□□□ -0.03
CCS-204ENST00000526066 LRP12Q9Y561 859 aa14.88□□□□□ -0.03
CCS-204ENST00000526066 NBEAL1Q6ZS30 2694 aa14.87□□□□□ -0.03
CCS-204ENST00000526066 LOC100509620A0A075B734 347 aa14.87□□□□□ -0.03
CCS-204ENST00000526066 METTL15A6NJ78 407 aa14.87□□□□□ -0.03
CCS-204ENST00000526066 M0R1B8 84 aa14.87□□□□□ -0.03
CCS-204ENST00000526066 PHF1O43189 567 aaPredicted RBP14.87□□□□□ -0.03
CCS-204ENST00000526066 ICMTO60725 284 aa14.87□□□□□ -0.03
CCS-204ENST00000526066 IGHV4-39P01824 125 aa14.87□□□□□ -0.03
CCS-204ENST00000526066 APOC1P02654 83 aa14.87□□□□□ -0.03
CCS-204ENST00000526066 MT-ND2P03891 347 aa14.87□□□□□ -0.03
CCS-204ENST00000526066 TACSTD2P09758 323 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms