RNA–Protein interactions for RNA: ENST00000525348.1

CD44-217, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 568 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-217ENST00000525348 PURGQ9UJV8 347 aaKnown RBP2.84□□□□□ -1.95
CD44-217ENST00000525348 ZNF221Q9UK13 617 aa2.84□□□□□ -1.95
CD44-217ENST00000525348 IKZF3Q9UKT9 509 aa2.84□□□□□ -1.95
CD44-217ENST00000525348 CLEC4EQ9ULY5 219 aa2.84□□□□□ -1.95
CD44-217ENST00000525348 SLC22A13Q9Y226 551 aa2.84□□□□□ -1.95
CD44-217ENST00000525348 ZNF337Q9Y3M9 751 aa2.84□□□□□ -1.95
CD44-217ENST00000525348 SAR1BQ9Y6B6 198 aa2.84□□□□□ -1.95
CD44-217ENST00000525348 KIF1AQ12756 1690 aa2.84□□□□□ -1.95
CD44-217ENST00000525348 TOPAZ1Q8N9V7 1692 aa2.84□□□□□ -1.95
CD44-217ENST00000525348 A0A1B0GUL6 1792 aa2.84□□□□□ -1.96
CD44-217ENST00000525348 PHIPQ8WWQ0 1821 aa2.84□□□□□ -1.96
CD44-217ENST00000525348 DISP2A7MBM2 1401 aa2.84□□□□□ -1.96
CD44-217ENST00000525348 PIK3C2GO75747 1445 aa2.84□□□□□ -1.96
CD44-217ENST00000525348 NCAPD2Q15021 1401 aa2.84□□□□□ -1.96
CD44-217ENST00000525348 CASKIN1Q8WXD9 1431 aa2.84□□□□□ -1.96
CD44-217ENST00000525348 DUOX2Q9NRD8 1548 aa2.83□□□□□ -1.96
CD44-217ENST00000525348 COL14A1Q05707 1796 aaKnown RBP2.83□□□□□ -1.96
CD44-217ENST00000525348 KCNE1BA0A087WTH5 132 aa2.83□□□□□ -1.96
CD44-217ENST00000525348 VSTM2BA6NLU5 285 aa2.83□□□□□ -1.96
CD44-217ENST00000525348 CENPXA8MT69 81 aa2.83□□□□□ -1.96
CD44-217ENST00000525348 SULT1C2O00338 296 aa2.83□□□□□ -1.96
CD44-217ENST00000525348 EEF2KO00418 725 aaKnown RBP2.83□□□□□ -1.96
CD44-217ENST00000525348 DLGAP1O14490 977 aa2.83□□□□□ -1.96
CD44-217ENST00000525348 BCKDKO14874 412 aa2.83□□□□□ -1.96
CD44-217ENST00000525348 SIVA1O15304 175 aa2.83□□□□□ -1.96
CD44-217ENST00000525348 SYT7O43581 403 aa2.83□□□□□ -1.96
CD44-217ENST00000525348 PSTPIP1O43586 416 aa2.83□□□□□ -1.96
CD44-217ENST00000525348 PLIN3O60664 434 aa2.83□□□□□ -1.96
CD44-217ENST00000525348 KCNK2O95069 426 aa2.83□□□□□ -1.96
CD44-217ENST00000525348 PTTG1O95997 202 aa2.83□□□□□ -1.96
CD44-217ENST00000525348 ACTL6AO96019 429 aa2.83□□□□□ -1.96
CD44-217ENST00000525348 SHBGP04278 402 aa2.83□□□□□ -1.96
CD44-217ENST00000525348 GYPCP04921 128 aa2.83□□□□□ -1.96
CD44-217ENST00000525348 TRAPPC2P0DI81 140 aa2.83□□□□□ -1.96
CD44-217ENST00000525348 TRAPPC2BP0DI82 140 aa2.83□□□□□ -1.96
CD44-217ENST00000525348 SMIM10L1P0DMW3 83 aa2.83□□□□□ -1.96
CD44-217ENST00000525348 GABRA1P14867 456 aa2.83□□□□□ -1.96
CD44-217ENST00000525348 HLA-GP17693 338 aa2.83□□□□□ -1.96
CD44-217ENST00000525348 PCMT1P22061 227 aa2.83□□□□□ -1.96
CD44-217ENST00000525348 GPX3P22352 226 aa2.83□□□□□ -1.96
CD44-217ENST00000525348 UQCRC2P22695 453 aa2.83□□□□□ -1.96
CD44-217ENST00000525348 DDTP30046 118 aa2.83□□□□□ -1.96
CD44-217ENST00000525348 S100A7P31151 101 aa2.83□□□□□ -1.96
CD44-217ENST00000525348 S100A11P31949 105 aa2.83□□□□□ -1.96
CD44-217ENST00000525348 RFC3P40938 356 aa2.83□□□□□ -1.96
CD44-217ENST00000525348 GRIA1P42261 906 aa2.83□□□□□ -1.96
CD44-217ENST00000525348 TNFRSF4P43489 277 aa2.83□□□□□ -1.96
CD44-217ENST00000525348 HTR5AP47898 357 aa2.83□□□□□ -1.96
CD44-217ENST00000525348 PSMD8P48556 350 aa2.83□□□□□ -1.96
CD44-217ENST00000525348 MRPL19P49406 292 aaKnown RBP2.83□□□□□ -1.96
CD44-217ENST00000525348 EVX1P49640 407 aa2.83□□□□□ -1.96
CD44-217ENST00000525348 ACOT2P49753 483 aa2.83□□□□□ -1.96
CD44-217ENST00000525348 RAP1AP62834 184 aa2.83□□□□□ -1.96
CD44-217ENST00000525348 VLDLRP98155 873 aa2.83□□□□□ -1.96
CD44-217ENST00000525348 FGL1Q08830 312 aa2.83□□□□□ -1.96
CD44-217ENST00000525348 RIPPLY1Q0D2K3 151 aa2.83□□□□□ -1.96
CD44-217ENST00000525348 BNIP2Q12982 314 aa2.83□□□□□ -1.96
CD44-217ENST00000525348 ECH1Q13011 328 aa2.83□□□□□ -1.96
CD44-217ENST00000525348 OR8G1Q15617 311 aa2.83□□□□□ -1.96
CD44-217ENST00000525348 ZNF79Q15937 498 aa2.83□□□□□ -1.96
CD44-217ENST00000525348 HSD17B12Q53GQ0 312 aa2.83□□□□□ -1.96
CD44-217ENST00000525348 C5orf47Q569G3 176 aa2.83□□□□□ -1.96
CD44-217ENST00000525348 RNASE10Q5GAN6 216 aaKnown RBP2.83□□□□□ -1.96
CD44-217ENST00000525348 DCAF12Q5T6F0 453 aa2.83□□□□□ -1.96
CD44-217ENST00000525348 PRAMEF8Q5VWM4 474 aa2.83□□□□□ -1.96
CD44-217ENST00000525348 SYPL2Q5VXT5 272 aa2.83□□□□□ -1.96
CD44-217ENST00000525348 DCUN1D2Q6PH85 259 aa2.83□□□□□ -1.96
CD44-217ENST00000525348 XKRXQ6PP77 449 aa2.83□□□□□ -1.96
CD44-217ENST00000525348 IZUMO2Q6UXV1 221 aa2.83□□□□□ -1.96
CD44-217ENST00000525348 RNF165Q6ZSG1 346 aa2.83□□□□□ -1.96
CD44-217ENST00000525348 Q6ZVH6 145 aa2.83□□□□□ -1.96
CD44-217ENST00000525348 ARCQ7LC44 396 aa2.83□□□□□ -1.96
CD44-217ENST00000525348 ARPINQ7Z6K5 226 aa2.83□□□□□ -1.96
CD44-217ENST00000525348 SLC26A11Q86WA9 606 aa2.83□□□□□ -1.96
CD44-217ENST00000525348 SLC22A18ASQ8N1D0 253 aa2.83□□□□□ -1.96
CD44-217ENST00000525348 GATSQ8NAP1 163 aa2.83□□□□□ -1.96
CD44-217ENST00000525348 OR10W1Q8NGF6 305 aa2.83□□□□□ -1.96
CD44-217ENST00000525348 OR52B4Q8NGK2 314 aa2.83□□□□□ -1.96
CD44-217ENST00000525348 OR4F5Q8NH21 305 aa2.83□□□□□ -1.96
CD44-217ENST00000525348 ITFG1Q8TB96 612 aa2.83□□□□□ -1.96
CD44-217ENST00000525348 TMEM234Q8WY98 164 aa2.83□□□□□ -1.96
CD44-217ENST00000525348 OSTF1Q92882 214 aa2.83□□□□□ -1.96
CD44-217ENST00000525348 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.83□□□□□ -1.96
CD44-217ENST00000525348 MED8Q96G25 268 aa2.83□□□□□ -1.96
CD44-217ENST00000525348 SMIM10Q96HG1 83 aa2.83□□□□□ -1.96
CD44-217ENST00000525348 C4orf36Q96KX1 117 aa2.83□□□□□ -1.96
CD44-217ENST00000525348 OR5B2Q96R09 309 aa2.83□□□□□ -1.96
CD44-217ENST00000525348 EBF4Q9BQW3 602 aa2.83□□□□□ -1.96
CD44-217ENST00000525348 FEM1AQ9BSK4 669 aa2.83□□□□□ -1.96
CD44-217ENST00000525348 TSSK1BQ9BXA7 367 aa2.83□□□□□ -1.96
CD44-217ENST00000525348 DEFB126Q9BYW3 111 aa2.83□□□□□ -1.96
CD44-217ENST00000525348 TM6SF2Q9BZW4 377 aa2.83□□□□□ -1.96
CD44-217ENST00000525348 ROGDIQ9GZN7 287 aa2.83□□□□□ -1.96
CD44-217ENST00000525348 IL22Q9GZX6 179 aa2.83□□□□□ -1.96
CD44-217ENST00000525348 CALHM2Q9HA72 323 aa2.83□□□□□ -1.96
CD44-217ENST00000525348 POLD4Q9HCU8 107 aa2.83□□□□□ -1.96
CD44-217ENST00000525348 LYRM4Q9HD34 91 aa2.83□□□□□ -1.96
CD44-217ENST00000525348 LHX9Q9NQ69 397 aa2.83□□□□□ -1.96
CD44-217ENST00000525348 GHRLQ9UBU3 117 aa2.83□□□□□ -1.96
CD44-217ENST00000525348 FBXW2Q9UKT8 454 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms