RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 RASSF2P50749 326 aa10.86□□□□□ -0.67
TRAPPC4-205ENST00000525079 DVL1P1P54792 670 aaPredicted RBP10.86□□□□□ -0.67
TRAPPC4-205ENST00000525079 EIF2B1Q14232 305 aaKnown RBP10.86□□□□□ -0.67
TRAPPC4-205ENST00000525079 GK2Q14410 553 aaPredicted RBP10.86□□□□□ -0.67
TRAPPC4-205ENST00000525079 TAF13Q15543 124 aa10.86□□□□□ -0.67
TRAPPC4-205ENST00000525079 SNAI3Q3KNW1 292 aa10.86□□□□□ -0.67
TRAPPC4-205ENST00000525079 SLC27A4Q6P1M0 643 aa10.86□□□□□ -0.67
TRAPPC4-205ENST00000525079 PLBD1Q6P4A8 553 aa10.86□□□□□ -0.67
TRAPPC4-205ENST00000525079 GLCCI1Q86VQ1 547 aa10.86□□□□□ -0.67
TRAPPC4-205ENST00000525079 ERI1Q8IV48 349 aaKnown RBP10.86□□□□□ -0.67
TRAPPC4-205ENST00000525079 ZNF283Q8N7M2 679 aa10.86□□□□□ -0.67
TRAPPC4-205ENST00000525079 OR6N2Q8NGY6 317 aa10.86□□□□□ -0.67
TRAPPC4-205ENST00000525079 SPTSSAQ969W0 71 aa10.86□□□□□ -0.67
TRAPPC4-205ENST00000525079 ZNF799Q96GE5 643 aa10.86□□□□□ -0.67
TRAPPC4-205ENST00000525079 OR2V2Q96R30 315 aa10.86□□□□□ -0.67
TRAPPC4-205ENST00000525079 COPS4Q9BT78 406 aa10.86□□□□□ -0.67
TRAPPC4-205ENST00000525079 UBAP1Q9NZ09 502 aa10.86□□□□□ -0.67
TRAPPC4-205ENST00000525079 TANC2Q9HCD6 1990 aa10.86□□□□□ -0.67
TRAPPC4-205ENST00000525079 DYSFO75923 2080 aa10.86□□□□□ -0.67
TRAPPC4-205ENST00000525079 IQCF6A8MYZ5 107 aa10.85□□□□□ -0.67
TRAPPC4-205ENST00000525079 PRR23D1E9PI22 279 aaPredicted RBP10.85□□□□□ -0.67
TRAPPC4-205ENST00000525079 F5H5P2 479 aa10.85□□□□□ -0.67
TRAPPC4-205ENST00000525079 SURF4O15260 269 aa10.85□□□□□ -0.67
TRAPPC4-205ENST00000525079 MLNRO43193 412 aa10.85□□□□□ -0.67
TRAPPC4-205ENST00000525079 ATP5HO75947 161 aa10.85□□□□□ -0.67
TRAPPC4-205ENST00000525079 HLA-DPB1P04440 258 aa10.85□□□□□ -0.67
TRAPPC4-205ENST00000525079 MSMBP08118 114 aa10.85□□□□□ -0.67
TRAPPC4-205ENST00000525079 SBK2P0C263 348 aa10.85□□□□□ -0.67
TRAPPC4-205ENST00000525079 PRR23D2P0DMB1 279 aaPredicted RBP10.85□□□□□ -0.67
TRAPPC4-205ENST00000525079 SLC2A1P11166 492 aa10.85□□□□□ -0.67
TRAPPC4-205ENST00000525079 TNFRSF1AP19438 455 aa10.85□□□□□ -0.67
TRAPPC4-205ENST00000525079 HNF1AP20823 631 aa10.85□□□□□ -0.67
TRAPPC4-205ENST00000525079 GSTT1P30711 240 aa10.85□□□□□ -0.67
TRAPPC4-205ENST00000525079 CDK5Q00535 292 aa10.85□□□□□ -0.67
TRAPPC4-205ENST00000525079 SLC3A1Q07837 685 aa10.85□□□□□ -0.67
TRAPPC4-205ENST00000525079 MALLQ13021 153 aa10.85□□□□□ -0.67
TRAPPC4-205ENST00000525079 PCK2Q16822 640 aa10.85□□□□□ -0.67
TRAPPC4-205ENST00000525079 KLHL12Q53G59 568 aa10.85□□□□□ -0.67
TRAPPC4-205ENST00000525079 SHQ1Q6PI26 577 aaKnown RBP10.85□□□□□ -0.67
TRAPPC4-205ENST00000525079 OR13G1Q8NGZ3 307 aa10.85□□□□□ -0.67
TRAPPC4-205ENST00000525079 OR2AE1Q8NHA4 323 aa10.85□□□□□ -0.67
TRAPPC4-205ENST00000525079 ZNF420Q8TAQ5 688 aaPredicted RBP10.85□□□□□ -0.67
TRAPPC4-205ENST00000525079 ST7LQ8TDW4 575 aa10.85□□□□□ -0.67
TRAPPC4-205ENST00000525079 UTP4Q969X6 686 aaKnown RBP10.85□□□□□ -0.67
TRAPPC4-205ENST00000525079 TMEM186Q96B77 213 aa10.85□□□□□ -0.67
TRAPPC4-205ENST00000525079 ZMYND19Q96E35 227 aaPredicted RBP10.85□□□□□ -0.67
TRAPPC4-205ENST00000525079 MEGF10Q96KG7 1140 aa10.85□□□□□ -0.67
TRAPPC4-205ENST00000525079 INTS14Q96SY0 518 aa10.85□□□□□ -0.67
TRAPPC4-205ENST00000525079 GAL3ST1Q99999 423 aa10.85□□□□□ -0.67
TRAPPC4-205ENST00000525079 SLC30A2Q9BRI3 323 aa10.85□□□□□ -0.67
TRAPPC4-205ENST00000525079 DDX28Q9NUL7 540 aaKnown RBP10.85□□□□□ -0.67
TRAPPC4-205ENST00000525079 TMEM106BQ9NUM4 274 aa10.85□□□□□ -0.67
TRAPPC4-205ENST00000525079 TMEM100Q9NV29 134 aa10.85□□□□□ -0.67
TRAPPC4-205ENST00000525079 HIF1ANQ9NWT6 349 aa10.85□□□□□ -0.67
TRAPPC4-205ENST00000525079 KIF17Q9P2E2 1029 aa10.85□□□□□ -0.67
TRAPPC4-205ENST00000525079 IL19Q9UHD0 177 aa10.85□□□□□ -0.67
TRAPPC4-205ENST00000525079 PPP1R3CQ9UQK1 317 aa10.85□□□□□ -0.67
TRAPPC4-205ENST00000525079 NPTNQ9Y639 398 aa10.85□□□□□ -0.67
TRAPPC4-205ENST00000525079 PLPP2O43688 288 aa10.84□□□□□ -0.67
TRAPPC4-205ENST00000525079 DEAF1O75398 565 aaPredicted RBP10.84□□□□□ -0.67
TRAPPC4-205ENST00000525079 GLCEO94923 617 aa10.84□□□□□ -0.67
TRAPPC4-205ENST00000525079 IGHV2-5P01817 119 aa10.84□□□□□ -0.67
TRAPPC4-205ENST00000525079 HMGN1P05114 100 aa10.84□□□□□ -0.67
TRAPPC4-205ENST00000525079 SELEP16581 610 aa10.84□□□□□ -0.67
TRAPPC4-205ENST00000525079 PAICSP22234 425 aaKnown RBP10.84□□□□□ -0.67
TRAPPC4-205ENST00000525079 DAPP51397 102 aa10.84□□□□□ -0.67
TRAPPC4-205ENST00000525079 BLVRAP53004 296 aa10.84□□□□□ -0.67
TRAPPC4-205ENST00000525079 ZNF92Q03936 586 aa10.84□□□□□ -0.67
TRAPPC4-205ENST00000525079 TEX30Q5JUR7 227 aa10.84□□□□□ -0.67
TRAPPC4-205ENST00000525079 GLYATL3Q5SZD4 288 aa10.84□□□□□ -0.67
TRAPPC4-205ENST00000525079 C1orf146Q5VVC0 180 aa10.84□□□□□ -0.67
TRAPPC4-205ENST00000525079 FAHD2BQ6P2I3 314 aaPredicted RBP10.84□□□□□ -0.67
TRAPPC4-205ENST00000525079 PGAP1Q75T13 922 aa10.84□□□□□ -0.67
TRAPPC4-205ENST00000525079 MRPL21Q7Z2W9 205 aaKnown RBP10.84□□□□□ -0.67
TRAPPC4-205ENST00000525079 DPY19L4Q7Z388 723 aa10.84□□□□□ -0.67
TRAPPC4-205ENST00000525079 AMIGO2Q86SJ2 522 aa10.84□□□□□ -0.67
TRAPPC4-205ENST00000525079 PEG10Q86TG7 708 aaKnown RBP10.84□□□□□ -0.67
TRAPPC4-205ENST00000525079 CPOQ8IVL8 374 aa10.84□□□□□ -0.67
TRAPPC4-205ENST00000525079 BBS1Q8NFJ9 593 aa10.84□□□□□ -0.67
TRAPPC4-205ENST00000525079 OR51F2Q8NH61 342 aa10.84□□□□□ -0.67
TRAPPC4-205ENST00000525079 SPRYD4Q8WW59 207 aaPredicted RBP10.84□□□□□ -0.67
TRAPPC4-205ENST00000525079 FAHD2AQ96GK7 314 aa10.84□□□□□ -0.67
TRAPPC4-205ENST00000525079 PLEKHA8Q96JA3 519 aa10.84□□□□□ -0.67
TRAPPC4-205ENST00000525079 AMELYQ99218 206 aa10.84□□□□□ -0.67
TRAPPC4-205ENST00000525079 KCNJ15Q99712 375 aa10.84□□□□□ -0.67
TRAPPC4-205ENST00000525079 PAPOLBQ9NRJ5 636 aaKnown RBP10.84□□□□□ -0.67
TRAPPC4-205ENST00000525079 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.84□□□□□ -0.674e-7■■■■□ 19.9
TRAPPC4-205ENST00000525079 ZNF878C9JN71 531 aa10.83□□□□□ -0.68
TRAPPC4-205ENST00000525079 SELENOFO60613 162 aa10.83□□□□□ -0.68
TRAPPC4-205ENST00000525079 MITFO75030 526 aaPredicted RBP10.83□□□□□ -0.68
TRAPPC4-205ENST00000525079 ZNF205O95201 554 aa10.83□□□□□ -0.68
TRAPPC4-205ENST00000525079 IGHV2-70P01814 119 aa10.83□□□□□ -0.68
TRAPPC4-205ENST00000525079 OTX1P32242 354 aaPredicted RBP10.83□□□□□ -0.68
TRAPPC4-205ENST00000525079 SRP14P37108 136 aaKnown RBP10.83□□□□□ -0.68
TRAPPC4-205ENST00000525079 CRISP1P54107 249 aa10.83□□□□□ -0.68
TRAPPC4-205ENST00000525079 SRSF2Q01130 221 aaKnown RBP10.83□□□□□ -0.68
TRAPPC4-205ENST00000525079 DRAM2Q6UX65 266 aa10.83□□□□□ -0.68
TRAPPC4-205ENST00000525079 MOGAT3Q86VF5 341 aa10.83□□□□□ -0.68
TRAPPC4-205ENST00000525079 TIGD4Q8IY51 512 aa10.83□□□□□ -0.68
TRAPPC4-205ENST00000525079 OR5K1Q8NHB7 308 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms