RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 PTGES2Q9H7Z7 377 aa2.54□□□□□ -2
CSDE1-208ENST00000524652 NMNAT1Q9HAN9 279 aaPredicted RBP2.54□□□□□ -2
CSDE1-208ENST00000524652 C12orf10Q9HB07 376 aa2.54□□□□□ -2
CSDE1-208ENST00000524652 SEBOXQ9HB31 216 aaPredicted RBP2.54□□□□□ -2
CSDE1-208ENST00000524652 SDHAF3Q9NRP4 125 aa2.54□□□□□ -2
CSDE1-208ENST00000524652 ADPRHL2Q9NX46 363 aa2.54□□□□□ -2
CSDE1-208ENST00000524652 B3GAT1Q9P2W7 334 aa2.54□□□□□ -2
CSDE1-208ENST00000524652 B4GALT7Q9UBV7 327 aa2.54□□□□□ -2
CSDE1-208ENST00000524652 CHRNA9Q9UGM1 479 aa2.54□□□□□ -2
CSDE1-208ENST00000524652 SH3BGRL2Q9UJC5 107 aa2.54□□□□□ -2
CSDE1-208ENST00000524652 RPS6KA6Q9UK32 745 aa2.54□□□□□ -2
CSDE1-208ENST00000524652 AURKCQ9UQB9 309 aa2.54□□□□□ -2
CSDE1-208ENST00000524652 CAMK2AQ9UQM7 478 aa2.54□□□□□ -2
CSDE1-208ENST00000524652 AP4B1Q9Y6B7 739 aa2.54□□□□□ -2
CSDE1-208ENST00000524652 CEPT1Q9Y6K0 416 aa2.54□□□□□ -2
CSDE1-208ENST00000524652 U3KQV3 271 aa2.54□□□□□ -2
CSDE1-208ENST00000524652 PKDREJQ9NTG1 2253 aa2.54□□□□□ -2
CSDE1-208ENST00000524652 CACNA1DQ01668 2161 aa2.54□□□□□ -2
CSDE1-208ENST00000524652 HYDINQ4G0P3 5121 aa2.54□□□□□ -2
CSDE1-208ENST00000524652 PLCE1Q9P212 2302 aa2.53□□□□□ -2
CSDE1-208ENST00000524652 TRAV27A0A087WT01 109 aa2.53□□□□□ -2
CSDE1-208ENST00000524652 TRGV8A0A0C4DH27 118 aa2.53□□□□□ -2
CSDE1-208ENST00000524652 A0A1W2PRQ8 180 aa2.53□□□□□ -2
CSDE1-208ENST00000524652 SH3PXD2BA1X283 911 aa2.53□□□□□ -2
CSDE1-208ENST00000524652 LIPT2A6NK58 231 aa2.53□□□□□ -2
CSDE1-208ENST00000524652 KRTAP16-1A8MUX0 517 aa2.53□□□□□ -2
CSDE1-208ENST00000524652 A8MVM7 634 aa2.53□□□□□ -2
CSDE1-208ENST00000524652 C19orf84I3L1E1 186 aa2.53□□□□□ -2
CSDE1-208ENST00000524652 PDLIM1O00151 329 aa2.53□□□□□ -2
CSDE1-208ENST00000524652 TNFRSF11BO00300 401 aa2.53□□□□□ -2
CSDE1-208ENST00000524652 BCKDKO14874 412 aa2.53□□□□□ -2
CSDE1-208ENST00000524652 LRRTM2O43300 516 aa2.53□□□□□ -2
CSDE1-208ENST00000524652 CIDEAO60543 219 aa2.53□□□□□ -2
CSDE1-208ENST00000524652 CYTIPO60759 359 aa2.53□□□□□ -2
CSDE1-208ENST00000524652 TNFSF13O75888 250 aa2.53□□□□□ -2
CSDE1-208ENST00000524652 AKR7A3O95154 331 aa2.53□□□□□ -2
CSDE1-208ENST00000524652 GADD45GO95257 159 aa2.53□□□□□ -2
CSDE1-208ENST00000524652 ACTL6AO96019 429 aa2.53□□□□□ -2
CSDE1-208ENST00000524652 CST1P01037 141 aa2.53□□□□□ -2
CSDE1-208ENST00000524652 IFNA14P01570 189 aa2.53□□□□□ -2
CSDE1-208ENST00000524652 H1F0P07305 194 aaKnown RBP2.53□□□□□ -2
CSDE1-208ENST00000524652 STSP08842 583 aa2.53□□□□□ -2
CSDE1-208ENST00000524652 ASAH2BP0C7U1 165 aa2.53□□□□□ -2
CSDE1-208ENST00000524652 THRBP10828 461 aa2.53□□□□□ -2
CSDE1-208ENST00000524652 PNMTP11086 282 aa2.53□□□□□ -2
CSDE1-208ENST00000524652 UMPSP11172 480 aa2.53□□□□□ -2
CSDE1-208ENST00000524652 POU2F1P14859 743 aa2.53□□□□□ -2
CSDE1-208ENST00000524652 ABOP16442 354 aa2.53□□□□□ -2
CSDE1-208ENST00000524652 PRKACGP22612 351 aa2.53□□□□□ -2
CSDE1-208ENST00000524652 CXCR1P25024 350 aa2.53□□□□□ -2
CSDE1-208ENST00000524652 EPHA2P29317 976 aa2.53□□□□□ -2
CSDE1-208ENST00000524652 GRPRP30550 384 aa2.53□□□□□ -2
CSDE1-208ENST00000524652 CEACAM8P31997 349 aaPredicted RBP2.53□□□□□ -2
CSDE1-208ENST00000524652 EIF1P41567 113 aaKnown RBP2.53□□□□□ -2
CSDE1-208ENST00000524652 CA7P43166 264 aa2.53□□□□□ -2
CSDE1-208ENST00000524652 GPR4P46093 362 aa2.53□□□□□ -2
CSDE1-208ENST00000524652 DAPP51397 102 aa2.53□□□□□ -2
CSDE1-208ENST00000524652 CTBP2P56545 445 aa2.53□□□□□ -2
CSDE1-208ENST00000524652 COPZ1P61923 177 aa2.53□□□□□ -2
CSDE1-208ENST00000524652 RPS4XP62701 263 aaKnown RBP2.53□□□□□ -2
CSDE1-208ENST00000524652 PRKCDQ05655 676 aa2.53□□□□□ -2
CSDE1-208ENST00000524652 CHRNB3Q05901 458 aa2.53□□□□□ -2
CSDE1-208ENST00000524652 LGALS3BPQ08380 585 aa2.53□□□□□ -2
CSDE1-208ENST00000524652 ST3GAL3Q11203 375 aa2.53□□□□□ -2
CSDE1-208ENST00000524652 DGCR6Q14129 220 aa2.53□□□□□ -2
CSDE1-208ENST00000524652 MELKQ14680 651 aa2.53□□□□□ -2
CSDE1-208ENST00000524652 OR7A5Q15622 319 aa2.53□□□□□ -2
CSDE1-208ENST00000524652 ATP6AP1Q15904 470 aa2.53□□□□□ -2
CSDE1-208ENST00000524652 BCL2A1Q16548 175 aa2.53□□□□□ -2
CSDE1-208ENST00000524652 ZNF74Q16587 644 aa2.53□□□□□ -2
CSDE1-208ENST00000524652 ZSWIM7Q19AV6 140 aa2.53□□□□□ -2
CSDE1-208ENST00000524652 FAM98BQ52LJ0 330 aaKnown RBP2.53□□□□□ -2
CSDE1-208ENST00000524652 FGD3Q5JSP0 725 aa2.53□□□□□ -2
CSDE1-208ENST00000524652 PHYHD1Q5SRE7 291 aa2.53□□□□□ -2
CSDE1-208ENST00000524652 C1orf185Q5T7R7 199 aa2.53□□□□□ -2
CSDE1-208ENST00000524652 WLSQ5T9L3 541 aa2.53□□□□□ -2
CSDE1-208ENST00000524652 NSUN5P2Q63ZY6 315 aa2.53□□□□□ -2
CSDE1-208ENST00000524652 HBMQ6B0K9 141 aa2.53□□□□□ -2
CSDE1-208ENST00000524652 OR2T5Q6IEZ7 315 aa2.53□□□□□ -2
CSDE1-208ENST00000524652 FAM53AQ6NSI3 398 aaPredicted RBP2.53□□□□□ -2
CSDE1-208ENST00000524652 FAAP20Q6NZ36 180 aa2.53□□□□□ -2
CSDE1-208ENST00000524652 C1orf94Q6P1W5 598 aa2.53□□□□□ -2
CSDE1-208ENST00000524652 ULK3Q6PHR2 472 aa2.53□□□□□ -2
CSDE1-208ENST00000524652 CLEC18BQ6UXF7 455 aa2.53□□□□□ -2
CSDE1-208ENST00000524652 RBMS3Q6XE24 437 aaKnown RBP2.53□□□□□ -2
CSDE1-208ENST00000524652 TMPPEQ6ZT21 453 aa2.53□□□□□ -2
CSDE1-208ENST00000524652 NUFIP2Q7Z417 695 aaKnown RBP2.53□□□□□ -2
CSDE1-208ENST00000524652 ZER1Q7Z7L7 766 aa2.53□□□□□ -2
CSDE1-208ENST00000524652 RANBP3LQ86VV4 465 aaPredicted RBP2.53□□□□□ -2
CSDE1-208ENST00000524652 CYP4Z1Q86W10 505 aa2.53□□□□□ -2
CSDE1-208ENST00000524652 CCDC71Q8IV32 467 aaPredicted RBP2.53□□□□□ -2
CSDE1-208ENST00000524652 CPOQ8IVL8 374 aa2.53□□□□□ -2
CSDE1-208ENST00000524652 TUSC5Q8IXB3 177 aa2.53□□□□□ -2
CSDE1-208ENST00000524652 NRMQ8IXM6 262 aa2.53□□□□□ -2
CSDE1-208ENST00000524652 GCNT2Q8N0V5 402 aa2.53□□□□□ -2
CSDE1-208ENST00000524652 KDM8Q8N371 416 aa2.53□□□□□ -2
CSDE1-208ENST00000524652 CLDN22Q8N7P3 220 aa2.53□□□□□ -2
CSDE1-208ENST00000524652 TMEM99Q8N816 258 aa2.53□□□□□ -2
CSDE1-208ENST00000524652 ZIC4Q8N9L1 334 aa2.53□□□□□ -2
CSDE1-208ENST00000524652 LRRC75AQ8NAA5 344 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms