RNA–Protein interactions for RNA: ENST00000524277.1

SPARC-206, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 505 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-206ENST00000524277 F5H5K5 113 aa9.9□□□□□ -0.82
SPARC-206ENST00000524277 F5H5P2 479 aa9.9□□□□□ -0.82
SPARC-206ENST00000524277 MLNRO43193 412 aa9.9□□□□□ -0.82
SPARC-206ENST00000524277 GMDSO60547 372 aa9.9□□□□□ -0.82
SPARC-206ENST00000524277 GADD45GO95257 159 aa9.9□□□□□ -0.82
SPARC-206ENST00000524277 ACSM4P0C7M7 580 aa9.9□□□□□ -0.82
SPARC-206ENST00000524277 NOS3P29474 1203 aa9.9□□□□□ -0.82
SPARC-206ENST00000524277 MZT1Q08AG7 82 aa9.9□□□□□ -0.82
SPARC-206ENST00000524277 TRAP1Q12931 704 aaKnown RBP9.9□□□□□ -0.82
SPARC-206ENST00000524277 GK2Q14410 553 aaPredicted RBP9.9□□□□□ -0.82
SPARC-206ENST00000524277 SEC23BQ15437 767 aa9.9□□□□□ -0.82
SPARC-206ENST00000524277 SLC9A3R2Q15599 337 aa9.9□□□□□ -0.82
SPARC-206ENST00000524277 RSPO1Q2MKA7 263 aaPredicted RBP9.9□□□□□ -0.82
SPARC-206ENST00000524277 ZNF362Q5T0B9 420 aaPredicted RBP9.9□□□□□ -0.82
SPARC-206ENST00000524277 SLC18B1Q6NT16 456 aa9.9□□□□□ -0.82
SPARC-206ENST00000524277 RPL13AP3Q6NVV1 102 aa9.9□□□□□ -0.82
SPARC-206ENST00000524277 C16orf87Q6PH81 154 aa9.9□□□□□ -0.82
SPARC-206ENST00000524277 PGAP1Q75T13 922 aa9.9□□□□□ -0.82
SPARC-206ENST00000524277 BCL6BQ8N143 479 aaPredicted RBP9.9□□□□□ -0.82
SPARC-206ENST00000524277 LINC00471Q8N535 108 aa9.9□□□□□ -0.82
SPARC-206ENST00000524277 SPERTQ8NA61 448 aa9.9□□□□□ -0.82
SPARC-206ENST00000524277 OR52J3Q8NH60 311 aa9.9□□□□□ -0.82
SPARC-206ENST00000524277 SPRYD4Q8WW59 207 aaPredicted RBP9.9□□□□□ -0.82
SPARC-206ENST00000524277 SPTSSAQ969W0 71 aa9.9□□□□□ -0.82
SPARC-206ENST00000524277 DACT3Q96B18 629 aaPredicted RBP9.9□□□□□ -0.82
SPARC-206ENST00000524277 ZNF48Q96MX3 618 aaPredicted RBP9.9□□□□□ -0.82
SPARC-206ENST00000524277 NMNAT3Q96T66 252 aa9.9□□□□□ -0.82
SPARC-206ENST00000524277 NUDT16L1Q9BRJ7 211 aaKnown RBP9.9□□□□□ -0.82
SPARC-206ENST00000524277 IFT27Q9BW83 186 aa9.9□□□□□ -0.82
SPARC-206ENST00000524277 NOX4Q9NPH5 578 aa9.9□□□□□ -0.82
SPARC-206ENST00000524277 MED4Q9NPJ6 270 aa9.9□□□□□ -0.82
SPARC-206ENST00000524277 TMCC3Q9ULS5 477 aa9.9□□□□□ -0.82
SPARC-206ENST00000524277 MMP24Q9Y5R2 645 aa9.9□□□□□ -0.82
SPARC-206ENST00000524277 DOCK11Q5JSL3 2073 aa9.9□□□□□ -0.82
SPARC-206ENST00000524277 PKD1L1Q8TDX9 2849 aa9.9□□□□□ -0.82
SPARC-206ENST00000524277 TRRAPQ9Y4A5 3859 aa9.89□□□□□ -0.83
SPARC-206ENST00000524277 H0YL77 283 aa9.89□□□□□ -0.83
SPARC-206ENST00000524277 DCTN6O00399 190 aa9.89□□□□□ -0.83
SPARC-206ENST00000524277 WIPF1O43516 503 aa9.89□□□□□ -0.83
SPARC-206ENST00000524277 ENSAO43768 121 aaKnown RBP9.89□□□□□ -0.83
SPARC-206ENST00000524277 OR10H3O60404 316 aa9.89□□□□□ -0.83
SPARC-206ENST00000524277 HLA-DQA2P01906 255 aa9.89□□□□□ -0.83
SPARC-206ENST00000524277 LCATP04180 440 aa9.89□□□□□ -0.83
SPARC-206ENST00000524277 IGHV4-38-2P0DP08 117 aa9.89□□□□□ -0.83
SPARC-206ENST00000524277 HIST1H1CP16403 213 aaKnown RBP9.89□□□□□ -0.83
SPARC-206ENST00000524277 ZNF823P16415 610 aa9.89□□□□□ -0.83
SPARC-206ENST00000524277 SPIBQ01892 262 aa9.89□□□□□ -0.83
SPARC-206ENST00000524277 MAB21L1Q13394 359 aa9.89□□□□□ -0.83
SPARC-206ENST00000524277 MEP1BQ16820 701 aa9.89□□□□□ -0.83
SPARC-206ENST00000524277 GPR157Q5UAW9 335 aa9.89□□□□□ -0.83
SPARC-206ENST00000524277 WDR25Q64LD2 544 aaPredicted RBP9.89□□□□□ -0.83
SPARC-206ENST00000524277 CORO6Q6QEF8 472 aa9.89□□□□□ -0.83
SPARC-206ENST00000524277 TMEM86BQ8N661 226 aa9.89□□□□□ -0.83
SPARC-206ENST00000524277 BHLHE23Q8NDY6 225 aa9.89□□□□□ -0.83
SPARC-206ENST00000524277 OR4C15Q8NGM1 316 aa9.89□□□□□ -0.83
SPARC-206ENST00000524277 OR4K13Q8NH42 304 aa9.89□□□□□ -0.83
SPARC-206ENST00000524277 GNPDA2Q8TDQ7 276 aa9.89□□□□□ -0.83
SPARC-206ENST00000524277 C1orf147Q96MC9 270 aaPredicted RBP9.89□□□□□ -0.83
SPARC-206ENST00000524277 TSSK2Q96PF2 358 aa9.89□□□□□ -0.83
SPARC-206ENST00000524277 NSRP1Q9H0G5 558 aaKnown RBP9.89□□□□□ -0.83
SPARC-206ENST00000524277 OPA3Q9H6K4 179 aa9.89□□□□□ -0.83
SPARC-206ENST00000524277 UNKLQ9H9P5 680 aaKnown RBP9.89□□□□□ -0.83
SPARC-206ENST00000524277 FN3KRPQ9HA64 309 aa9.89□□□□□ -0.83
SPARC-206ENST00000524277 RPRD1BQ9NQG5 326 aaKnown RBP9.89□□□□□ -0.83
SPARC-206ENST00000524277 ADA2Q9NZK5 511 aa9.89□□□□□ -0.83
SPARC-206ENST00000524277 ERVK-18Q9QC07 812 aa9.89□□□□□ -0.83
SPARC-206ENST00000524277 RNF7Q9UBF6 113 aa9.89□□□□□ -0.83
SPARC-206ENST00000524277 MAGEL2Q9UJ55 1249 aa9.89□□□□□ -0.83
SPARC-206ENST00000524277 M0R135 149 aa9.88□□□□□ -0.83
SPARC-206ENST00000524277 KRT36O76013 467 aa9.88□□□□□ -0.83
SPARC-206ENST00000524277 ZNF205O95201 554 aa9.88□□□□□ -0.83
SPARC-206ENST00000524277 PTBP3O95758 552 aaKnown RBP9.88□□□□□ -0.83
SPARC-206ENST00000524277 GPANK1O95872 356 aa9.88□□□□□ -0.83
SPARC-206ENST00000524277 HSD17B1P14061 328 aa9.88□□□□□ -0.83
SPARC-206ENST00000524277 GGT2P36268 569 aa9.88□□□□□ -0.83
SPARC-206ENST00000524277 PSMB10P40306 273 aa9.88□□□□□ -0.83
SPARC-206ENST00000524277 PMELP40967 661 aa9.88□□□□□ -0.83
SPARC-206ENST00000524277 GSSP48637 474 aa9.88□□□□□ -0.83
SPARC-206ENST00000524277 RPL15P61313 204 aaKnown RBP9.88□□□□□ -0.83
SPARC-206ENST00000524277 TSPAN31Q12999 210 aa9.88□□□□□ -0.83
SPARC-206ENST00000524277 SPATS1Q496A3 300 aa9.88□□□□□ -0.83
SPARC-206ENST00000524277 OTPQ5XKR4 325 aa9.88□□□□□ -0.83
SPARC-206ENST00000524277 CFAP77Q6ZQR2 320 aa9.88□□□□□ -0.83
SPARC-206ENST00000524277 MRPL21Q7Z2W9 205 aaKnown RBP9.88□□□□□ -0.83
SPARC-206ENST00000524277 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.88□□□□□ -0.83
SPARC-206ENST00000524277 FITM2Q8N6M3 262 aa9.88□□□□□ -0.83
SPARC-206ENST00000524277 ZDHHC16Q969W1 377 aa9.88□□□□□ -0.83
SPARC-206ENST00000524277 SLCO4A1Q96BD0 722 aa9.88□□□□□ -0.83
SPARC-206ENST00000524277 ZNF799Q96GE5 643 aa9.88□□□□□ -0.83
SPARC-206ENST00000524277 FAM71F1Q96KD3 344 aaPredicted RBP9.88□□□□□ -0.83
SPARC-206ENST00000524277 DUX5Q96PT3 197 aa9.88□□□□□ -0.83
SPARC-206ENST00000524277 MYLK2Q9H1R3 596 aa9.88□□□□□ -0.83
SPARC-206ENST00000524277 MRPL15Q9P015 296 aaKnown RBP9.88□□□□□ -0.83
SPARC-206ENST00000524277 MEGF8Q7Z7M0 2845 aa9.88□□□□□ -0.83
SPARC-206ENST00000524277 TRAV38-1A0A0B4J264 116 aa9.87□□□□□ -0.83
SPARC-206ENST00000524277 TRAV40A0A0B4J280 105 aa9.87□□□□□ -0.83
SPARC-206ENST00000524277 OR6C68A6NDL8 312 aa9.87□□□□□ -0.83
SPARC-206ENST00000524277 CD300LBA8K4G0 201 aa9.87□□□□□ -0.83
SPARC-206ENST00000524277 LGALS8O00214 317 aa9.87□□□□□ -0.83
SPARC-206ENST00000524277 P2RY10O00398 339 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms