RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 GCSAMQ8N6F7 178 aa11.19□□□□□ -0.62
NKX3-1-202ENST00000523261 ZNF781Q8N8C0 355 aa11.19□□□□□ -0.62
NKX3-1-202ENST00000523261 APOPT1Q96IL0 206 aa11.19□□□□□ -0.62
NKX3-1-202ENST00000523261 RCHY1Q96PM5 261 aa11.19□□□□□ -0.62
NKX3-1-202ENST00000523261 PRSS22Q9GZN4 317 aa11.19□□□□□ -0.62
NKX3-1-202ENST00000523261 WDR76Q9H967 626 aa11.19□□□□□ -0.62
NKX3-1-202ENST00000523261 SLC13A4Q9UKG4 626 aa11.19□□□□□ -0.62
NKX3-1-202ENST00000523261 TSSC4Q9Y5U2 329 aaPredicted RBP11.19□□□□□ -0.62
NKX3-1-202ENST00000523261 IGHV3OR15-7A0A075B7D8 119 aa11.18□□□□□ -0.62
NKX3-1-202ENST00000523261 PRORSD1PA6NEY8 169 aa11.18□□□□□ -0.62
NKX3-1-202ENST00000523261 M0R3H8 397 aa11.18□□□□□ -0.62
NKX3-1-202ENST00000523261 ITM2AO43736 263 aa11.18□□□□□ -0.62
NKX3-1-202ENST00000523261 SYNGR1O43759 233 aa11.18□□□□□ -0.62
NKX3-1-202ENST00000523261 SHBGP04278 402 aa11.18□□□□□ -0.62
NKX3-1-202ENST00000523261 SERPINE1P05121 402 aa11.18□□□□□ -0.62
NKX3-1-202ENST00000523261 TSPAN19P0C672 248 aa11.18□□□□□ -0.62
NKX3-1-202ENST00000523261 FAM153BP0C7A2 387 aa11.18□□□□□ -0.62
NKX3-1-202ENST00000523261 CASQ1P31415 396 aa11.18□□□□□ -0.62
NKX3-1-202ENST00000523261 CNN3Q15417 329 aaKnown RBP11.18□□□□□ -0.62
NKX3-1-202ENST00000523261 NPTX1Q15818 432 aa11.18□□□□□ -0.62
NKX3-1-202ENST00000523261 ENTPD8Q5MY95 495 aa11.18□□□□□ -0.62
NKX3-1-202ENST00000523261 TEX36Q5VZQ5 186 aa11.18□□□□□ -0.62
NKX3-1-202ENST00000523261 TSPYL5Q86VY4 417 aaPredicted RBP11.18□□□□□ -0.62
NKX3-1-202ENST00000523261 TFAP2CQ92754 450 aa11.18□□□□□ -0.62
NKX3-1-202ENST00000523261 APOBEC3DQ96AK3 386 aaPredicted RBP11.18□□□□□ -0.62
NKX3-1-202ENST00000523261 ZBTB18Q99592 522 aa11.18□□□□□ -0.62
NKX3-1-202ENST00000523261 CCL13Q99616 98 aa11.18□□□□□ -0.62
NKX3-1-202ENST00000523261 TXLNGYQ9BZA5 131 aa11.18□□□□□ -0.62
NKX3-1-202ENST00000523261 TXNIPQ9H3M7 391 aa11.18□□□□□ -0.62
NKX3-1-202ENST00000523261 RAD21L1Q9H4I0 556 aa11.18□□□□□ -0.62
NKX3-1-202ENST00000523261 METTL8Q9H825 291 aaKnown RBP11.18□□□□□ -0.62
NKX3-1-202ENST00000523261 EVA1AQ9H8M9 152 aa11.18□□□□□ -0.62
NKX3-1-202ENST00000523261 PRPF19Q9UMS4 504 aaKnown RBP11.18□□□□□ -0.62
NKX3-1-202ENST00000523261 TCRBV4S1A1TA0A5B7 111 aa11.17□□□□□ -0.62
NKX3-1-202ENST00000523261 SMIM23A6NLE4 172 aa11.17□□□□□ -0.62
NKX3-1-202ENST00000523261 CPSF4LA6NMK7 179 aaKnown RBP11.17□□□□□ -0.62
NKX3-1-202ENST00000523261 SLC22A3O75751 556 aa11.17□□□□□ -0.62
NKX3-1-202ENST00000523261 FUT1P19526 365 aa11.17□□□□□ -0.62
NKX3-1-202ENST00000523261 VDAC2P45880 294 aaPredicted RBP11.17□□□□□ -0.62
NKX3-1-202ENST00000523261 CKAP4Q07065 602 aaKnown RBP11.17□□□□□ -0.62
NKX3-1-202ENST00000523261 REEP3Q6NUK4 255 aa11.17□□□□□ -0.62
NKX3-1-202ENST00000523261 ZNF826PQ6ZT77 177 aa11.17□□□□□ -0.62
NKX3-1-202ENST00000523261 MRPL41Q8IXM3 137 aaKnown RBP11.17□□□□□ -0.62
NKX3-1-202ENST00000523261 FAM216BQ8N7L0 139 aa11.17□□□□□ -0.62
NKX3-1-202ENST00000523261 OR1F12Q8NHA8 337 aa11.17□□□□□ -0.62
NKX3-1-202ENST00000523261 FNDC8Q8TC99 324 aa11.17□□□□□ -0.62
NKX3-1-202ENST00000523261 LRRC8CQ8TDW0 803 aa11.17□□□□□ -0.62
NKX3-1-202ENST00000523261 ADAMTS16Q8TE57 1224 aa11.17□□□□□ -0.62
NKX3-1-202ENST00000523261 MPP4Q96JB8 637 aa11.17□□□□□ -0.62
NKX3-1-202ENST00000523261 HCAR1Q9BXC0 346 aa11.17□□□□□ -0.62
NKX3-1-202ENST00000523261 ZMAT5Q9UDW3 170 aaKnown RBP11.17□□□□□ -0.62
NKX3-1-202ENST00000523261 SLC7A7Q9UM01 511 aa11.17□□□□□ -0.62
NKX3-1-202ENST00000523261 SF3B6Q9Y3B4 125 aaKnown RBP11.17□□□□□ -0.62
NKX3-1-202ENST00000523261 CAPN7Q9Y6W3 813 aa11.17□□□□□ -0.62
NKX3-1-202ENST00000523261 TRBV23-1A0A0A0MS06 115 aa11.16□□□□□ -0.62
NKX3-1-202ENST00000523261 M0R1W7 72 aa11.16□□□□□ -0.62
NKX3-1-202ENST00000523261 CLIC1O00299 241 aa11.16□□□□□ -0.62
NKX3-1-202ENST00000523261 OR7A10O76100 309 aa11.16□□□□□ -0.62
NKX3-1-202ENST00000523261 IL6P05231 212 aa11.16□□□□□ -0.62
NKX3-1-202ENST00000523261 CDK6Q00534 326 aa11.16□□□□□ -0.62
NKX3-1-202ENST00000523261 TOP3AQ13472 1001 aaPredicted RBP11.16□□□□□ -0.62
NKX3-1-202ENST00000523261 LAPTM4AQ15012 233 aa11.16□□□□□ -0.62
NKX3-1-202ENST00000523261 CCDC92Q53HC0 331 aaPredicted RBP11.16□□□□□ -0.62
NKX3-1-202ENST00000523261 ARSJQ5FYB0 599 aaPredicted RBP11.16□□□□□ -0.62
NKX3-1-202ENST00000523261 WDR38Q5JTN6 314 aa11.16□□□□□ -0.62
NKX3-1-202ENST00000523261 UNQ9370/PRO34162Q6UXP9 181 aa11.16□□□□□ -0.62
NKX3-1-202ENST00000523261 ETV3LQ6ZN32 361 aa11.16□□□□□ -0.62
NKX3-1-202ENST00000523261 PLPP7Q8NBV4 271 aa11.16□□□□□ -0.62
NKX3-1-202ENST00000523261 OR6T1Q8NGN1 323 aa11.16□□□□□ -0.62
NKX3-1-202ENST00000523261 MYDGFQ969H8 173 aa11.16□□□□□ -0.62
NKX3-1-202ENST00000523261 ITCHQ96J02 903 aa11.16□□□□□ -0.62
NKX3-1-202ENST00000523261 PRSS27Q9BQR3 290 aa11.16□□□□□ -0.62
NKX3-1-202ENST00000523261 MCRIP2Q9BUT9 160 aaKnown RBP11.16□□□□□ -0.62
NKX3-1-202ENST00000523261 C1orf123Q9NWV4 160 aa11.16□□□□□ -0.62
NKX3-1-202ENST00000523261 ATPIF1Q9UII2 106 aa11.16□□□□□ -0.62
NKX3-1-202ENST00000523261 RBMY1BA6NDE4 496 aaKnown RBP11.15□□□□□ -0.62
NKX3-1-202ENST00000523261 RBMY1EA6NEQ0 496 aaKnown RBP11.15□□□□□ -0.62
NKX3-1-202ENST00000523261 RAMP3O60896 148 aa11.15□□□□□ -0.62
NKX3-1-202ENST00000523261 BPGMP07738 259 aa11.15□□□□□ -0.62
NKX3-1-202ENST00000523261 RBMY1DP0C7P1 496 aaKnown RBP11.15□□□□□ -0.62
NKX3-1-202ENST00000523261 CA6P23280 308 aa11.15□□□□□ -0.62
NKX3-1-202ENST00000523261 CHATP28329 748 aa11.15□□□□□ -0.62
NKX3-1-202ENST00000523261 RPL27P61353 136 aaKnown RBP11.15□□□□□ -0.62
NKX3-1-202ENST00000523261 BLCAPP62952 87 aa11.15□□□□□ -0.62
NKX3-1-202ENST00000523261 AQP6Q13520 282 aa11.15□□□□□ -0.62
NKX3-1-202ENST00000523261 OR8G1Q15617 311 aa11.15□□□□□ -0.62
NKX3-1-202ENST00000523261 C6orf10Q5SRN2 563 aa11.15□□□□□ -0.62
NKX3-1-202ENST00000523261 GCNT6Q5T4J0 391 aa11.15□□□□□ -0.62
NKX3-1-202ENST00000523261 TMEM219Q86XT9 240 aa11.15□□□□□ -0.62
NKX3-1-202ENST00000523261 RBM45Q8IUH3 476 aaKnown RBP11.15□□□□□ -0.62
NKX3-1-202ENST00000523261 ARMC8Q8IUR7 673 aa11.15□□□□□ -0.62
NKX3-1-202ENST00000523261 TCP10LQ8TDR4 215 aa11.15□□□□□ -0.62
NKX3-1-202ENST00000523261 EPS8L3Q8TE67 593 aaKnown RBP11.15□□□□□ -0.62
NKX3-1-202ENST00000523261 ACOT11Q8WXI4 607 aaPredicted RBP11.15□□□□□ -0.62
NKX3-1-202ENST00000523261 RBMXL1Q96E39 390 aaKnown RBP11.15□□□□□ -0.62
NKX3-1-202ENST00000523261 PAIP1Q9H074 479 aaKnown RBP11.15□□□□□ -0.62
NKX3-1-202ENST00000523261 TCF19Q9Y242 345 aa11.15□□□□□ -0.62
NKX3-1-202ENST00000523261 TRAPPC13A5PLN9 417 aa11.14□□□□□ -0.63
NKX3-1-202ENST00000523261 A6NDX4 124 aa11.14□□□□□ -0.63
NKX3-1-202ENST00000523261 NKX6-3A6NJ46 265 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms