RNA–Protein interactions for RNA: ENST00000522792.1

CTNNA1-236, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 2,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-236ENST00000522792 LRRTM1Q86UE6 522 aa13.49□□□□□ -0.25
CTNNA1-236ENST00000522792 OR1K1Q8NGR3 316 aa13.49□□□□□ -0.25
CTNNA1-236ENST00000522792 NOX3Q9HBY0 568 aa13.49□□□□□ -0.25
CTNNA1-236ENST00000522792 GPR84Q9NQS5 396 aa13.49□□□□□ -0.25
CTNNA1-236ENST00000522792 TAS2R4Q9NYW5 299 aa13.49□□□□□ -0.25
CTNNA1-236ENST00000522792 FAM215AQ9Y5M1 114 aa13.49□□□□□ -0.25
CTNNA1-236ENST00000522792 NCOR2Q9Y618 2525 aa13.49□□□□□ -0.25
CTNNA1-236ENST00000522792 A0A0B4J203 849 aa13.49□□□□□ -0.25
CTNNA1-236ENST00000522792 A0A1B0GTI1 187 aa13.49□□□□□ -0.25
CTNNA1-236ENST00000522792 A0A1B0GVI7 797 aa13.49□□□□□ -0.25
CTNNA1-236ENST00000522792 OR6C6A6NF89 314 aa13.49□□□□□ -0.25
CTNNA1-236ENST00000522792 NOTOA8MTQ0 251 aa13.49□□□□□ -0.25
CTNNA1-236ENST00000522792 PDCD5O14737 125 aa13.49□□□□□ -0.25
CTNNA1-236ENST00000522792 CD2P06729 351 aa13.49□□□□□ -0.25
CTNNA1-236ENST00000522792 EPXP11678 715 aa13.49□□□□□ -0.25
CTNNA1-236ENST00000522792 GABRA1P14867 456 aa13.49□□□□□ -0.25
CTNNA1-236ENST00000522792 ATF1P18846 271 aa13.49□□□□□ -0.25
CTNNA1-236ENST00000522792 OTX1P32242 354 aaPredicted RBP13.49□□□□□ -0.25
CTNNA1-236ENST00000522792 HGFACQ04756 655 aa13.49□□□□□ -0.25
CTNNA1-236ENST00000522792 MADCAM1Q13477 382 aa13.49□□□□□ -0.25
CTNNA1-236ENST00000522792 C1orf185Q5T7R7 199 aa13.49□□□□□ -0.25
CTNNA1-236ENST00000522792 HES5Q5TA89 166 aa13.49□□□□□ -0.25
CTNNA1-236ENST00000522792 FAM57AQ8TBR7 257 aa13.49□□□□□ -0.25
CTNNA1-236ENST00000522792 BORCS5Q969J3 196 aa13.49□□□□□ -0.25
CTNNA1-236ENST00000522792 SNRNP40Q96DI7 357 aaKnown RBP13.49□□□□□ -0.25
CTNNA1-236ENST00000522792 FAM71F1Q96KD3 344 aaPredicted RBP13.49□□□□□ -0.25
CTNNA1-236ENST00000522792 SLC17A5Q9NRA2 495 aa13.49□□□□□ -0.25
CTNNA1-236ENST00000522792 MBD3L4A6NDZ8 208 aaPredicted RBP13.48□□□□□ -0.25
CTNNA1-236ENST00000522792 MBD3L3A6NE82 208 aaPredicted RBP13.48□□□□□ -0.25
CTNNA1-236ENST00000522792 MBD3L5A6NJ08 208 aaPredicted RBP13.48□□□□□ -0.25
CTNNA1-236ENST00000522792 FIGNL2A6NMB9 653 aa13.48□□□□□ -0.25
CTNNA1-236ENST00000522792 WDR1O75083 606 aa13.48□□□□□ -0.25
CTNNA1-236ENST00000522792 TOXO94900 526 aa13.48□□□□□ -0.25
CTNNA1-236ENST00000522792 PAHP00439 452 aa13.48□□□□□ -0.25
CTNNA1-236ENST00000522792 CFL1P23528 166 aaKnown RBP13.48□□□□□ -0.25
CTNNA1-236ENST00000522792 ECH1Q13011 328 aa13.48□□□□□ -0.25
CTNNA1-236ENST00000522792 SF3B4Q15427 424 aaKnown RBP eCLIP13.48□□□□□ -0.253e-7■□□□□ 10.2
CTNNA1-236ENST00000522792 SNAI3Q3KNW1 292 aa13.48□□□□□ -0.25
CTNNA1-236ENST00000522792 CCDC190Q86UF4 302 aa13.48□□□□□ -0.25
CTNNA1-236ENST00000522792 PARP16Q8N5Y8 322 aa13.48□□□□□ -0.25
CTNNA1-236ENST00000522792 CPEB3Q8NE35 698 aaKnown RBP13.48□□□□□ -0.25
CTNNA1-236ENST00000522792 OR6K3Q8NGY3 331 aa13.48□□□□□ -0.25
CTNNA1-236ENST00000522792 MBD3L2Q8NHZ7 208 aaPredicted RBP13.48□□□□□ -0.25
CTNNA1-236ENST00000522792 THRSPQ92748 146 aa13.48□□□□□ -0.25
CTNNA1-236ENST00000522792 FGGYQ96C11 551 aa13.48□□□□□ -0.25
CTNNA1-236ENST00000522792 ASF1BQ9NVP2 202 aa13.48□□□□□ -0.25
CTNNA1-236ENST00000522792 IGHV1-2P23083 117 aa13.47□□□□□ -0.25
CTNNA1-236ENST00000522792 TPTEP56180 551 aa13.47□□□□□ -0.25
CTNNA1-236ENST00000522792 SPANXN2Q5MJ10 180 aa13.47□□□□□ -0.25
CTNNA1-236ENST00000522792 MZT2AQ6P582 158 aa13.47□□□□□ -0.25
CTNNA1-236ENST00000522792 ANKRD16Q6P6B7 361 aa13.47□□□□□ -0.25
CTNNA1-236ENST00000522792 SNX29P2Q8IUI4 249 aa13.47□□□□□ -0.25
CTNNA1-236ENST00000522792 CROCCP3Q8IVE0 287 aa13.47□□□□□ -0.25
CTNNA1-236ENST00000522792 ZNF275Q9NSD4 429 aaPredicted RBP13.47□□□□□ -0.25
CTNNA1-236ENST00000522792 TUBD1Q9UJT1 453 aa13.47□□□□□ -0.25
CTNNA1-236ENST00000522792 V9GY05 133 aa13.47□□□□□ -0.25
CTNNA1-236ENST00000522792 SVILO95425 2214 aa13.47□□□□□ -0.25
CTNNA1-236ENST00000522792 DOCK7Q96N67 2140 aa13.47□□□□□ -0.25
CTNNA1-236ENST00000522792 ANXA2P2A6NMY6 339 aa13.47□□□□□ -0.25
CTNNA1-236ENST00000522792 RAD51DO75771 328 aa13.47□□□□□ -0.25
CTNNA1-236ENST00000522792 LYZL6O75951 148 aa13.47□□□□□ -0.25
CTNNA1-236ENST00000522792 APOC1P02654 83 aa13.47□□□□□ -0.25
CTNNA1-236ENST00000522792 SNRPBP14678 240 aaKnown RBP13.47□□□□□ -0.25
CTNNA1-236ENST00000522792 APEX1P27695 318 aaKnown RBP13.47□□□□□ -0.25
CTNNA1-236ENST00000522792 TSC22D1Q15714 1073 aa13.47□□□□□ -0.25
CTNNA1-236ENST00000522792 C16orf87Q6PH81 154 aa13.47□□□□□ -0.25
CTNNA1-236ENST00000522792 DRAM2Q6UX65 266 aa13.47□□□□□ -0.25
CTNNA1-236ENST00000522792 GFRALQ6UXV0 394 aa13.47□□□□□ -0.25
CTNNA1-236ENST00000522792 NAXEQ8NCW5 288 aa13.47□□□□□ -0.25
CTNNA1-236ENST00000522792 OR1J2Q8NGS2 313 aa13.47□□□□□ -0.25
CTNNA1-236ENST00000522792 TRMT10AQ8TBZ6 339 aaKnown RBP13.47□□□□□ -0.25
CTNNA1-236ENST00000522792 ACOT12Q8WYK0 555 aa13.47□□□□□ -0.25
CTNNA1-236ENST00000522792 BCL2L2Q92843 193 aaPredicted RBP13.47□□□□□ -0.25
CTNNA1-236ENST00000522792 LYZL4Q96KX0 146 aa13.47□□□□□ -0.25
CTNNA1-236ENST00000522792 WDFY2Q96P53 400 aa13.47□□□□□ -0.25
CTNNA1-236ENST00000522792 NKX3-1Q99801 234 aaPredicted RBP13.47□□□□□ -0.25
CTNNA1-236ENST00000522792 WACQ9BTA9 647 aa13.47□□□□□ -0.25
CTNNA1-236ENST00000522792 CKLFQ9UBR5 152 aa13.47□□□□□ -0.25
CTNNA1-236ENST00000522792 PIEZO2Q9H5I5 2752 aa13.47□□□□□ -0.25
CTNNA1-236ENST00000522792 TNFSF13O75888 250 aa13.46□□□□□ -0.25
CTNNA1-236ENST00000522792 TMIGD3P0DMS9 266 aaPredicted RBP13.46□□□□□ -0.25
CTNNA1-236ENST00000522792 CLDN12P56749 244 aa13.46□□□□□ -0.25
CTNNA1-236ENST00000522792 RAB1AP62820 205 aa13.46□□□□□ -0.25
CTNNA1-236ENST00000522792 PPP3R1P63098 170 aa13.46□□□□□ -0.25
CTNNA1-236ENST00000522792 KRTAP27-1Q3LI81 207 aa13.46□□□□□ -0.25
CTNNA1-236ENST00000522792 OR51A2Q8NGJ7 313 aa13.46□□□□□ -0.25
CTNNA1-236ENST00000522792 ADAT3Q96EY9 351 aaPredicted RBP13.46□□□□□ -0.25
CTNNA1-236ENST00000522792 DIRAS2Q96HU8 199 aa13.46□□□□□ -0.25
CTNNA1-236ENST00000522792 SLX1AQ9BQ83 275 aa13.46□□□□□ -0.25
CTNNA1-236ENST00000522792 OPN3Q9H1Y3 402 aaPredicted RBP13.46□□□□□ -0.25
CTNNA1-236ENST00000522792 ZCCHC4Q9H5U6 513 aa13.46□□□□□ -0.25
CTNNA1-236ENST00000522792 IFITM5A6NNB3 132 aa13.46□□□□□ -0.26
CTNNA1-236ENST00000522792 LCATP04180 440 aa13.46□□□□□ -0.26
CTNNA1-236ENST00000522792 CCL2P13500 99 aa13.46□□□□□ -0.26
CTNNA1-236ENST00000522792 IGFBP3P17936 291 aaPredicted RBP13.46□□□□□ -0.26
CTNNA1-236ENST00000522792 CCNOP22674 350 aa13.46□□□□□ -0.26
CTNNA1-236ENST00000522792 PTGER4P35408 488 aa13.46□□□□□ -0.26
CTNNA1-236ENST00000522792 GNALP38405 381 aa13.46□□□□□ -0.26
CTNNA1-236ENST00000522792 ZNF45Q02386 682 aa13.46□□□□□ -0.26
CTNNA1-236ENST00000522792 TBRG1Q3YBR2 411 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms