RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 ACSM4P0C7M7 580 aa11.36□□□□□ -0.59
CPNE3-205ENST00000522240 UBCP0CG48 685 aaKnown RBP11.36□□□□□ -0.59
CPNE3-205ENST00000522240 CBR1P16152 277 aa11.36□□□□□ -0.59
CPNE3-205ENST00000522240 KIR3DL2P43630 455 aa11.36□□□□□ -0.59
CPNE3-205ENST00000522240 UQCRFS1P47985 274 aa11.36□□□□□ -0.59
CPNE3-205ENST00000522240 PRKXP51817 358 aa11.36□□□□□ -0.59
CPNE3-205ENST00000522240 TMBIM6P55061 237 aa11.36□□□□□ -0.59
CPNE3-205ENST00000522240 ZNF121P58317 390 aaPredicted RBP11.36□□□□□ -0.59
CPNE3-205ENST00000522240 RPS25P62851 125 aaKnown RBP11.36□□□□□ -0.59
CPNE3-205ENST00000522240 TUBA1BP68363 451 aa11.36□□□□□ -0.59
CPNE3-205ENST00000522240 TSC22D1Q15714 1073 aa11.36□□□□□ -0.59
CPNE3-205ENST00000522240 C3orf36Q3SXR2 165 aa11.36□□□□□ -0.59
CPNE3-205ENST00000522240 BCL2L15Q5TBC7 163 aa11.36□□□□□ -0.59
CPNE3-205ENST00000522240 GPR107Q5VW38 600 aa11.36□□□□□ -0.59
CPNE3-205ENST00000522240 CD200R1LQ6Q8B3 271 aa11.36□□□□□ -0.59
CPNE3-205ENST00000522240 GDPGP1Q6ZNW5 385 aa11.36□□□□□ -0.59
CPNE3-205ENST00000522240 SLC16A12Q6ZSM3 486 aa11.36□□□□□ -0.59
CPNE3-205ENST00000522240 TUBA1AQ71U36 451 aa11.36□□□□□ -0.59
CPNE3-205ENST00000522240 ZNF584Q8IVC4 421 aa11.36□□□□□ -0.59
CPNE3-205ENST00000522240 PRSS35Q8N3Z0 413 aa11.36□□□□□ -0.59
CPNE3-205ENST00000522240 MS4A15Q8N5U1 240 aa11.36□□□□□ -0.59
CPNE3-205ENST00000522240 LILRB4Q8NHJ6 448 aa11.36□□□□□ -0.59
CPNE3-205ENST00000522240 RAB2BQ8WUD1 216 aa11.36□□□□□ -0.59
CPNE3-205ENST00000522240 THRSPQ92748 146 aa11.36□□□□□ -0.59
CPNE3-205ENST00000522240 G6PC2Q9NQR9 355 aa11.36□□□□□ -0.59
CPNE3-205ENST00000522240 FRRS1LQ9P0K9 344 aa11.36□□□□□ -0.59
CPNE3-205ENST00000522240 CRNNQ9UBG3 495 aaPredicted RBP11.36□□□□□ -0.59
CPNE3-205ENST00000522240 ERRFI1Q9UJM3 462 aaPredicted RBP11.36□□□□□ -0.59
CPNE3-205ENST00000522240 OR52A1Q9UKL2 312 aa11.36□□□□□ -0.59
CPNE3-205ENST00000522240 STUB1Q9UNE7 303 aa11.36□□□□□ -0.59
CPNE3-205ENST00000522240 SLC25A15Q9Y619 301 aa11.36□□□□□ -0.59
CPNE3-205ENST00000522240 MYO9AB2RTY4 2548 aa11.36□□□□□ -0.59
CPNE3-205ENST00000522240 RELNP78509 3460 aa11.36□□□□□ -0.59
CPNE3-205ENST00000522240 A6NJY4 79 aa11.35□□□□□ -0.59
CPNE3-205ENST00000522240 C16orf97H3BN30 126 aa11.35□□□□□ -0.59
CPNE3-205ENST00000522240 LRRTM2O43300 516 aa11.35□□□□□ -0.59
CPNE3-205ENST00000522240 ZFPL1O95159 310 aa11.35□□□□□ -0.59
CPNE3-205ENST00000522240 SERPINA3P01011 423 aa11.35□□□□□ -0.59
CPNE3-205ENST00000522240 HLA-DPB1P04440 258 aa11.35□□□□□ -0.59
CPNE3-205ENST00000522240 SERPINA5P05154 406 aa11.35□□□□□ -0.59
CPNE3-205ENST00000522240 PPP3CBP16298 524 aa11.35□□□□□ -0.59
CPNE3-205ENST00000522240 ZNF14P17017 642 aaPredicted RBP11.35□□□□□ -0.59
CPNE3-205ENST00000522240 AGAP20933 346 aa11.35□□□□□ -0.59
CPNE3-205ENST00000522240 GADD45AP24522 165 aa11.35□□□□□ -0.59
CPNE3-205ENST00000522240 STOMP27105 288 aa11.35□□□□□ -0.59
CPNE3-205ENST00000522240 APLNRP35414 380 aa11.35□□□□□ -0.59
CPNE3-205ENST00000522240 UGT2B10P36537 528 aa11.35□□□□□ -0.59
CPNE3-205ENST00000522240 SLC3A1Q07837 685 aa11.35□□□□□ -0.59
CPNE3-205ENST00000522240 IGFBP7Q16270 282 aa11.35□□□□□ -0.59
CPNE3-205ENST00000522240 RSPO1Q2MKA7 263 aaPredicted RBP11.35□□□□□ -0.59
CPNE3-205ENST00000522240 YIF1BQ5BJH7 314 aa11.35□□□□□ -0.59
CPNE3-205ENST00000522240 ZNF704Q6ZNC4 412 aaPredicted RBP11.35□□□□□ -0.59
CPNE3-205ENST00000522240 PRSS45Q7RTY3 260 aa11.35□□□□□ -0.59
CPNE3-205ENST00000522240 ELMOD2Q8IZ81 293 aa11.35□□□□□ -0.59
CPNE3-205ENST00000522240 CPEB3Q8NE35 698 aaKnown RBP11.35□□□□□ -0.59
CPNE3-205ENST00000522240 OR5AK2Q8NH90 309 aa11.35□□□□□ -0.59
CPNE3-205ENST00000522240 GHSRQ92847 366 aa11.35□□□□□ -0.59
CPNE3-205ENST00000522240 S100PBPQ96BU1 408 aa11.35□□□□□ -0.59
CPNE3-205ENST00000522240 ISOC1Q96CN7 298 aa11.35□□□□□ -0.59
CPNE3-205ENST00000522240 LRRC46Q96FV0 321 aa11.35□□□□□ -0.59
CPNE3-205ENST00000522240 POM121L2Q96KW2 1035 aa11.35□□□□□ -0.59
CPNE3-205ENST00000522240 ACTR6Q9GZN1 396 aa11.35□□□□□ -0.59
CPNE3-205ENST00000522240 PBOV1Q9GZY1 135 aa11.35□□□□□ -0.59
CPNE3-205ENST00000522240 GTF2A1LQ9UNN4 478 aa11.35□□□□□ -0.59
CPNE3-205ENST00000522240 ZNF281Q9Y2X9 895 aa11.35□□□□□ -0.59
CPNE3-205ENST00000522240 UNC79Q9P2D8 2635 aa11.35□□□□□ -0.59
CPNE3-205ENST00000522240 CACNA1CQ13936 2221 aa11.35□□□□□ -0.59
CPNE3-205ENST00000522240 A0A0U1RQV5 110 aa11.34□□□□□ -0.59
CPNE3-205ENST00000522240 TRDV1A0A1B0GX56 115 aa11.34□□□□□ -0.59
CPNE3-205ENST00000522240 F5H5K5 113 aa11.34□□□□□ -0.59
CPNE3-205ENST00000522240 J3QW42 95 aa11.34□□□□□ -0.59
CPNE3-205ENST00000522240 AIREO43918 545 aa11.34□□□□□ -0.59
CPNE3-205ENST00000522240 SC5DO75845 299 aa11.34□□□□□ -0.59
CPNE3-205ENST00000522240 RGS9O75916 674 aaPredicted RBP11.34□□□□□ -0.59
CPNE3-205ENST00000522240 IGLV1-44P01699 117 aa11.34□□□□□ -0.59
CPNE3-205ENST00000522240 ISG15P05161 165 aa11.34□□□□□ -0.59
CPNE3-205ENST00000522240 DBHP09172 617 aa11.34□□□□□ -0.59
CPNE3-205ENST00000522240 ACHEP22303 614 aa11.34□□□□□ -0.59
CPNE3-205ENST00000522240 APEX1P27695 318 aaKnown RBP11.34□□□□□ -0.59
CPNE3-205ENST00000522240 CRYBB2P43320 205 aa11.34□□□□□ -0.59
CPNE3-205ENST00000522240 SORDQ00796 357 aa11.34□□□□□ -0.59
CPNE3-205ENST00000522240 GALK2Q01415 458 aa11.34□□□□□ -0.59
CPNE3-205ENST00000522240 FAM27E3Q08E93 113 aa11.34□□□□□ -0.59
CPNE3-205ENST00000522240 TBC1D28Q2M2D7 210 aa11.34□□□□□ -0.59
CPNE3-205ENST00000522240 TMEM244Q5VVB8 128 aa11.34□□□□□ -0.59
CPNE3-205ENST00000522240 ZNF676Q8N7Q3 588 aa11.34□□□□□ -0.59
CPNE3-205ENST00000522240 OR8B12Q8NGG6 310 aa11.34□□□□□ -0.59
CPNE3-205ENST00000522240 OR52H1Q8NGJ2 320 aa11.34□□□□□ -0.59
CPNE3-205ENST00000522240 OR1J2Q8NGS2 313 aa11.34□□□□□ -0.59
CPNE3-205ENST00000522240 SLC7A6Q92536 515 aa11.34□□□□□ -0.59
CPNE3-205ENST00000522240 RNASE6Q93091 150 aaKnown RBP11.34□□□□□ -0.59
CPNE3-205ENST00000522240 PDCD1LG2Q9BQ51 273 aa11.34□□□□□ -0.59
CPNE3-205ENST00000522240 TMED9Q9BVK6 235 aa11.34□□□□□ -0.59
CPNE3-205ENST00000522240 C1QTNF5Q9BXJ0 243 aa11.34□□□□□ -0.59
CPNE3-205ENST00000522240 NAA50Q9GZZ1 169 aaKnown RBP11.34□□□□□ -0.59
CPNE3-205ENST00000522240 OR51E2Q9H255 320 aa11.34□□□□□ -0.59
CPNE3-205ENST00000522240 RSL24D1Q9UHA3 163 aaKnown RBP11.34□□□□□ -0.59
CPNE3-205ENST00000522240 ZNF391Q9UJN7 358 aa11.34□□□□□ -0.59
CPNE3-205ENST00000522240 SSR3Q9UNL2 185 aa11.34□□□□□ -0.59
CPNE3-205ENST00000522240 SLC22A13Q9Y226 551 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms