RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 POLR2HP52434 150 aaKnown RBP2.72□□□□□ -1.97
VPS13B-209ENST00000521559 SUCLG1P53597 346 aaKnown RBP2.72□□□□□ -1.97
VPS13B-209ENST00000521559 CLDN15P56746 228 aa2.72□□□□□ -1.97
VPS13B-209ENST00000521559 CLDN18P56856 261 aa2.72□□□□□ -1.97
VPS13B-209ENST00000521559 CARD18P57730 90 aa2.72□□□□□ -1.97
VPS13B-209ENST00000521559 SMIM11AP58511 58 aa2.72□□□□□ -1.97
VPS13B-209ENST00000521559 HERV-K104P61576 105 aa2.72□□□□□ -1.97
VPS13B-209ENST00000521559 SRYQ05066 204 aa2.72□□□□□ -1.97
VPS13B-209ENST00000521559 CHRNB3Q05901 458 aa2.72□□□□□ -1.97
VPS13B-209ENST00000521559 ST3GAL3Q11203 375 aa2.72□□□□□ -1.97
VPS13B-209ENST00000521559 MERTKQ12866 999 aa2.72□□□□□ -1.97
VPS13B-209ENST00000521559 FOXF1Q12946 379 aa2.72□□□□□ -1.97
VPS13B-209ENST00000521559 SELENBP1Q13228 472 aa2.72□□□□□ -1.97
VPS13B-209ENST00000521559 FLOT2Q14254 428 aa2.72□□□□□ -1.97
VPS13B-209ENST00000521559 OR1Q1Q15612 314 aa2.72□□□□□ -1.97
VPS13B-209ENST00000521559 ZSCAN26Q16670 478 aa2.72□□□□□ -1.97
VPS13B-209ENST00000521559 VWC2Q2TAL6 325 aa2.72□□□□□ -1.97
VPS13B-209ENST00000521559 CTU2Q2VPK5 515 aaKnown RBP2.72□□□□□ -1.97
VPS13B-209ENST00000521559 TMEM176BQ3YBM2 270 aaPredicted RBP2.72□□□□□ -1.97
VPS13B-209ENST00000521559 IQCCQ4KMZ1 466 aa2.72□□□□□ -1.97
VPS13B-209ENST00000521559 WLSQ5T9L3 541 aa2.72□□□□□ -1.97
VPS13B-209ENST00000521559 ULK3Q6PHR2 472 aa2.72□□□□□ -1.97
VPS13B-209ENST00000521559 SHQ1Q6PI26 577 aaKnown RBP2.72□□□□□ -1.97
VPS13B-209ENST00000521559 Q6ZPB1 254 aaPredicted RBP2.72□□□□□ -1.97
VPS13B-209ENST00000521559 TMPPEQ6ZT21 453 aa2.72□□□□□ -1.97
VPS13B-209ENST00000521559 CHMP1BQ7LBR1 199 aa2.72□□□□□ -1.97
VPS13B-209ENST00000521559 PIWIL3Q7Z3Z3 882 aaKnown RBP2.72□□□□□ -1.97
VPS13B-209ENST00000521559 TSEN54Q7Z6J9 526 aaKnown RBP2.72□□□□□ -1.97
VPS13B-209ENST00000521559 VTCN1Q7Z7D3 282 aa2.72□□□□□ -1.97
VPS13B-209ENST00000521559 RANBP3LQ86VV4 465 aaPredicted RBP2.72□□□□□ -1.97
VPS13B-209ENST00000521559 CYP4Z1Q86W10 505 aa2.72□□□□□ -1.97
VPS13B-209ENST00000521559 DOLPP1Q86YN1 238 aa2.72□□□□□ -1.97
VPS13B-209ENST00000521559 RBM45Q8IUH3 476 aaKnown RBP2.72□□□□□ -1.97
VPS13B-209ENST00000521559 LACC1Q8IV20 430 aa2.72□□□□□ -1.97
VPS13B-209ENST00000521559 MARVELD2Q8N4S9 558 aa2.72□□□□□ -1.97
VPS13B-209ENST00000521559 FAM86B1Q8N7N1 296 aa2.72□□□□□ -1.97
VPS13B-209ENST00000521559 ZNF383Q8NA42 475 aa2.72□□□□□ -1.97
VPS13B-209ENST00000521559 ATP6V1C2Q8NEY4 427 aa2.72□□□□□ -1.97
VPS13B-209ENST00000521559 OR6T1Q8NGN1 323 aa2.72□□□□□ -1.97
VPS13B-209ENST00000521559 OR5M9Q8NGP3 310 aa2.72□□□□□ -1.97
VPS13B-209ENST00000521559 OR5M8Q8NGP6 311 aa2.72□□□□□ -1.97
VPS13B-209ENST00000521559 OR10Q1Q8NGQ4 319 aa2.72□□□□□ -1.97
VPS13B-209ENST00000521559 OR6S1Q8NH40 331 aa2.72□□□□□ -1.97
VPS13B-209ENST00000521559 OR2V1Q8NHB1 315 aa2.72□□□□□ -1.97
VPS13B-209ENST00000521559 VANGL1Q8TAA9 524 aaPredicted RBP2.72□□□□□ -1.97
VPS13B-209ENST00000521559 SETD6Q8TBK2 473 aa2.72□□□□□ -1.97
VPS13B-209ENST00000521559 FAM57AQ8TBR7 257 aa2.72□□□□□ -1.97
VPS13B-209ENST00000521559 ZPLD1Q8TCW7 415 aa2.72□□□□□ -1.97
VPS13B-209ENST00000521559 ADAMTS16Q8TE57 1224 aa2.72□□□□□ -1.97
VPS13B-209ENST00000521559 PHF10Q8WUB8 498 aaKnown RBP2.72□□□□□ -1.97
VPS13B-209ENST00000521559 GEMIN6Q8WXD5 167 aaKnown RBP2.72□□□□□ -1.97
VPS13B-209ENST00000521559 OSTF1Q92882 214 aa2.72□□□□□ -1.97
VPS13B-209ENST00000521559 SLC38A4Q969I6 547 aa2.72□□□□□ -1.97
VPS13B-209ENST00000521559 CCDC124Q96CT7 223 aaKnown RBP2.72□□□□□ -1.97
VPS13B-209ENST00000521559 ASB9Q96DX5 294 aa2.72□□□□□ -1.97
VPS13B-209ENST00000521559 C7orf34Q96L11 122 aa2.72□□□□□ -1.97
VPS13B-209ENST00000521559 ZNF300Q96RE9 604 aaPredicted RBP2.72□□□□□ -1.97
VPS13B-209ENST00000521559 URM1Q9BTM9 101 aaKnown RBP2.72□□□□□ -1.97
VPS13B-209ENST00000521559 POLR2J2Q9GZM3 115 aaKnown RBP2.72□□□□□ -1.97
VPS13B-209ENST00000521559 POLR2J3Q9H1A7 115 aaKnown RBP2.72□□□□□ -1.97
VPS13B-209ENST00000521559 NMNAT1Q9HAN9 279 aaPredicted RBP2.72□□□□□ -1.97
VPS13B-209ENST00000521559 IL1RAPQ9NPH3 570 aa2.72□□□□□ -1.97
VPS13B-209ENST00000521559 CTPS2Q9NRF8 586 aa2.72□□□□□ -1.97
VPS13B-209ENST00000521559 SLC7A10Q9NS82 523 aa2.72□□□□□ -1.97
VPS13B-209ENST00000521559 PLCXD1Q9NUJ7 323 aa2.72□□□□□ -1.97
VPS13B-209ENST00000521559 RPS6KB2Q9UBS0 482 aa2.72□□□□□ -1.97
VPS13B-209ENST00000521559 CHRNA9Q9UGM1 479 aa2.72□□□□□ -1.97
VPS13B-209ENST00000521559 SLC7A8Q9UHI5 535 aa2.72□□□□□ -1.97
VPS13B-209ENST00000521559 RIMS3Q9UJD0 308 aa2.72□□□□□ -1.97
VPS13B-209ENST00000521559 POMPQ9Y244 141 aa2.72□□□□□ -1.97
VPS13B-209ENST00000521559 TRAPPC4Q9Y296 219 aa2.72□□□□□ -1.97
VPS13B-209ENST00000521559 TMED7Q9Y3B3 224 aa2.72□□□□□ -1.97
VPS13B-209ENST00000521559 HDGFL3Q9Y3E1 203 aa2.72□□□□□ -1.97
VPS13B-209ENST00000521559 ZNF337Q9Y3M9 751 aa2.72□□□□□ -1.97
VPS13B-209ENST00000521559 FAM32AQ9Y421 112 aaKnown RBP2.72□□□□□ -1.97
VPS13B-209ENST00000521559 ENPP4Q9Y6X5 453 aa2.72□□□□□ -1.97
VPS13B-209ENST00000521559 LAMA1P25391 3075 aa2.72□□□□□ -1.97
VPS13B-209ENST00000521559 CFAP54Q96N23 3096 aa2.72□□□□□ -1.97
VPS13B-209ENST00000521559 ACACAQ13085 2346 aa2.71□□□□□ -1.97
VPS13B-209ENST00000521559 DCHS1Q96JQ0 3298 aa2.71□□□□□ -1.98
VPS13B-209ENST00000521559 NUP210LQ5VU65 1888 aa2.71□□□□□ -1.98
VPS13B-209ENST00000521559 DNAH14Q0VDD8 3507 aa2.71□□□□□ -1.98
VPS13B-209ENST00000521559 DMXL1Q9Y485 3027 aa2.71□□□□□ -1.98
VPS13B-209ENST00000521559 IGKV1D-42A0A075B6H8 117 aa2.71□□□□□ -1.98
VPS13B-209ENST00000521559 TRAV36DV7A0A075B6V5 113 aa2.71□□□□□ -1.98
VPS13B-209ENST00000521559 TRGV8A0A0C4DH27 118 aa2.71□□□□□ -1.98
VPS13B-209ENST00000521559 DHRS12A0PJE2 317 aa2.71□□□□□ -1.98
VPS13B-209ENST00000521559 HTR3EA5X5Y0 456 aa2.71□□□□□ -1.98
VPS13B-209ENST00000521559 ANKRD61A6NGH8 418 aa2.71□□□□□ -1.98
VPS13B-209ENST00000521559 CPSF4LA6NMK7 179 aaKnown RBP2.71□□□□□ -1.98
VPS13B-209ENST00000521559 A8MVM7 634 aa2.71□□□□□ -1.98
VPS13B-209ENST00000521559 E9PQ18 207 aa2.71□□□□□ -1.98
VPS13B-209ENST00000521559 H0YC42 278 aa2.71□□□□□ -1.98
VPS13B-209ENST00000521559 TRIM77I1YAP6 450 aa2.71□□□□□ -1.98
VPS13B-209ENST00000521559 hCG_2039718K7EN88 272 aa2.71□□□□□ -1.98
VPS13B-209ENST00000521559 TNFSF11O14788 317 aa2.71□□□□□ -1.98
VPS13B-209ENST00000521559 FFAR1O14842 300 aa2.71□□□□□ -1.98
VPS13B-209ENST00000521559 CHP2O43745 196 aa2.71□□□□□ -1.98
VPS13B-209ENST00000521559 OR2T1O43869 369 aa2.71□□□□□ -1.98
VPS13B-209ENST00000521559 CXCL13O43927 109 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms