RNA–Protein interactions for RNA: ENST00000521368.5

CTNNA1-226, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-226ENST00000521368 COPS3Q9UNS2 423 aa11.8□□□□□ -0.52
CTNNA1-226ENST00000521368 HSPE1-MOB4S4R3N1 261 aa11.8□□□□□ -0.52
CTNNA1-226ENST00000521368 ZNF670-ZNF695F2Z2N8 137 aa11.79□□□□□ -0.52
CTNNA1-226ENST00000521368 RRP9O43818 475 aaKnown RBP11.79□□□□□ -0.52
CTNNA1-226ENST00000521368 ATP6V1G2O95670 118 aa11.79□□□□□ -0.52
CTNNA1-226ENST00000521368 ADRA2AP08913 450 aa11.79□□□□□ -0.52
CTNNA1-226ENST00000521368 ATP6V1E1P36543 226 aa11.79□□□□□ -0.52
CTNNA1-226ENST00000521368 MMP15P51511 669 aa11.79□□□□□ -0.52
CTNNA1-226ENST00000521368 PRKXP51817 358 aa11.79□□□□□ -0.52
CTNNA1-226ENST00000521368 EFNA4P52798 201 aa11.79□□□□□ -0.52
CTNNA1-226ENST00000521368 HCCSP53701 268 aa11.79□□□□□ -0.52
CTNNA1-226ENST00000521368 CXCR4P61073 352 aa11.79□□□□□ -0.52
CTNNA1-226ENST00000521368 EGR3Q06889 387 aa11.79□□□□□ -0.52
CTNNA1-226ENST00000521368 MALLQ13021 153 aa11.79□□□□□ -0.52
CTNNA1-226ENST00000521368 MAD2L1BPQ15013 274 aaPredicted RBP11.79□□□□□ -0.52
CTNNA1-226ENST00000521368 NKPD1Q17RQ9 610 aa11.79□□□□□ -0.52
CTNNA1-226ENST00000521368 ZMAT1Q5H9K5 638 aa11.79□□□□□ -0.52
CTNNA1-226ENST00000521368 TMEM255AQ5JRV8 349 aa11.79□□□□□ -0.52
CTNNA1-226ENST00000521368 Q5PR19 223 aa11.79□□□□□ -0.52
CTNNA1-226ENST00000521368 LRRN1Q6UXK5 716 aa11.79□□□□□ -0.52
CTNNA1-226ENST00000521368 PRSS45Q7RTY3 260 aa11.79□□□□□ -0.52
CTNNA1-226ENST00000521368 KRT77Q7Z794 578 aa11.79□□□□□ -0.52
CTNNA1-226ENST00000521368 KRTAP1-3Q8IUG1 177 aa11.79□□□□□ -0.52
CTNNA1-226ENST00000521368 SNX33Q8WV41 574 aa11.79□□□□□ -0.52
CTNNA1-226ENST00000521368 NEU4Q8WWR8 484 aaPredicted RBP11.79□□□□□ -0.52
CTNNA1-226ENST00000521368 SORCS2Q96PQ0 1159 aa11.79□□□□□ -0.52
CTNNA1-226ENST00000521368 OR8B4Q96RC9 309 aa11.79□□□□□ -0.52
CTNNA1-226ENST00000521368 VRK1Q99986 396 aaPredicted RBP11.79□□□□□ -0.52
CTNNA1-226ENST00000521368 MROQ9BYG7 248 aa11.79□□□□□ -0.52
CTNNA1-226ENST00000521368 OPA3Q9H6K4 179 aa11.79□□□□□ -0.52
CTNNA1-226ENST00000521368 PURGQ9UJV8 347 aaKnown RBP11.79□□□□□ -0.52
CTNNA1-226ENST00000521368 LRP12Q9Y561 859 aa11.79□□□□□ -0.52
CTNNA1-226ENST00000521368 ARFGEF3Q5TH69 2177 aa11.79□□□□□ -0.52
CTNNA1-226ENST00000521368 AKAP9Q99996 3911 aa11.78□□□□□ -0.52
CTNNA1-226ENST00000521368 PLSCR5A0PG75 271 aa11.78□□□□□ -0.52
CTNNA1-226ENST00000521368 XRCC2O43543 280 aa11.78□□□□□ -0.52
CTNNA1-226ENST00000521368 NDUFS7O75251 213 aa11.78□□□□□ -0.52
CTNNA1-226ENST00000521368 F12P00748 615 aaPredicted RBP11.78□□□□□ -0.52
CTNNA1-226ENST00000521368 ADH4P08319 380 aa11.78□□□□□ -0.52
CTNNA1-226ENST00000521368 DBTP11182 482 aaKnown RBP11.78□□□□□ -0.52
CTNNA1-226ENST00000521368 SELEP16581 610 aa11.78□□□□□ -0.52
CTNNA1-226ENST00000521368 ALDH3B1P43353 468 aa11.78□□□□□ -0.52
CTNNA1-226ENST00000521368 PSMA6P60900 246 aaKnown RBP11.78□□□□□ -0.52
CTNNA1-226ENST00000521368 ACTC1P68032 377 aa11.78□□□□□ -0.52
CTNNA1-226ENST00000521368 ACTA1P68133 377 aa11.78□□□□□ -0.52
CTNNA1-226ENST00000521368 IL5RAQ01344 420 aa11.78□□□□□ -0.52
CTNNA1-226ENST00000521368 ZNF91Q05481 1191 aa11.78□□□□□ -0.52
CTNNA1-226ENST00000521368 SNAI3Q3KNW1 292 aa11.78□□□□□ -0.52
CTNNA1-226ENST00000521368 ZNF322Q6U7Q0 402 aaPredicted RBP11.78□□□□□ -0.52
CTNNA1-226ENST00000521368 OR52H1Q8NGJ2 320 aa11.78□□□□□ -0.52
CTNNA1-226ENST00000521368 APH1BQ8WW43 257 aa11.78□□□□□ -0.52
CTNNA1-226ENST00000521368 SPSB4Q96A44 273 aa11.78□□□□□ -0.52
CTNNA1-226ENST00000521368 CMBLQ96DG6 245 aa11.78□□□□□ -0.52
CTNNA1-226ENST00000521368 RNFT2Q96EX2 444 aa11.78□□□□□ -0.52
CTNNA1-226ENST00000521368 MYOZ1Q9NP98 299 aaPredicted RBP11.78□□□□□ -0.52
CTNNA1-226ENST00000521368 MRPS18AQ9NVS2 196 aaKnown RBP11.78□□□□□ -0.52
CTNNA1-226ENST00000521368 NKIRAS2Q9NYR9 191 aa11.78□□□□□ -0.52
CTNNA1-226ENST00000521368 PTTG3PQ9NZH4 202 aa11.78□□□□□ -0.52
CTNNA1-226ENST00000521368 AASSQ9UDR5 926 aa11.78□□□□□ -0.52
CTNNA1-226ENST00000521368 EXOGQ9Y2C4 368 aaKnown RBP11.78□□□□□ -0.52
CTNNA1-226ENST00000521368 RRP15Q9Y3B9 282 aaKnown RBP11.78□□□□□ -0.52
CTNNA1-226ENST00000521368 PCDHGB1Q9Y5G3 927 aa11.78□□□□□ -0.52
CTNNA1-226ENST00000521368 RTTNQ86VV8 2226 aa11.78□□□□□ -0.52
CTNNA1-226ENST00000521368 PRRC2AP48634 2157 aaKnown RBP11.77□□□□□ -0.53
CTNNA1-226ENST00000521368 A0A1W2PQL4 384 aaPredicted RBP11.77□□□□□ -0.53
CTNNA1-226ENST00000521368 ACOD1A6NK06 481 aa11.77□□□□□ -0.53
CTNNA1-226ENST00000521368 C17orf100A8MU93 164 aa11.77□□□□□ -0.53
CTNNA1-226ENST00000521368 PRR32B1ATL7 298 aa11.77□□□□□ -0.53
CTNNA1-226ENST00000521368 J3QRE1 110 aa11.77□□□□□ -0.53
CTNNA1-226ENST00000521368 TIMM8AO60220 97 aaPredicted RBP11.77□□□□□ -0.53
CTNNA1-226ENST00000521368 WBP4O75554 376 aaKnown RBP11.77□□□□□ -0.53
CTNNA1-226ENST00000521368 CLIC3O95833 236 aa11.77□□□□□ -0.53
CTNNA1-226ENST00000521368 ANXA2P07355 339 aaKnown RBP11.77□□□□□ -0.53
CTNNA1-226ENST00000521368 CSF3P09919 207 aa11.77□□□□□ -0.53
CTNNA1-226ENST00000521368 RIDAP52758 137 aaKnown RBP11.77□□□□□ -0.53
CTNNA1-226ENST00000521368 ZNF121P58317 390 aaPredicted RBP11.77□□□□□ -0.53
CTNNA1-226ENST00000521368 ISL1P61371 349 aa11.77□□□□□ -0.53
CTNNA1-226ENST00000521368 RAB40BQ12829 278 aa11.77□□□□□ -0.53
CTNNA1-226ENST00000521368 GK2Q14410 553 aaPredicted RBP11.77□□□□□ -0.53
CTNNA1-226ENST00000521368 HLXQ14774 488 aaPredicted RBP11.77□□□□□ -0.53
CTNNA1-226ENST00000521368 PCGF3Q3KNV8 242 aa11.77□□□□□ -0.53
CTNNA1-226ENST00000521368 DNM1P46Q6ZS02 220 aa11.77□□□□□ -0.53
CTNNA1-226ENST00000521368 USP51Q70EK9 711 aa11.77□□□□□ -0.53
CTNNA1-226ENST00000521368 PGAP1Q75T13 922 aa11.77□□□□□ -0.53
CTNNA1-226ENST00000521368 C8orf59Q8N0T1 100 aaPredicted RBP11.77□□□□□ -0.53
CTNNA1-226ENST00000521368 RFLNBQ8N5W9 214 aa11.77□□□□□ -0.53
CTNNA1-226ENST00000521368 TFAP2CQ92754 450 aa11.77□□□□□ -0.53
CTNNA1-226ENST00000521368 DIRC2Q96SL1 478 aa11.77□□□□□ -0.53
CTNNA1-226ENST00000521368 ZNF391Q9UJN7 358 aa11.77□□□□□ -0.53
CTNNA1-226ENST00000521368 RPL36Q9Y3U8 105 aaKnown RBP11.77□□□□□ -0.53
CTNNA1-226ENST00000521368 IQCF6A8MYZ5 107 aa11.76□□□□□ -0.53
CTNNA1-226ENST00000521368 SULT1C4O75897 302 aa11.76□□□□□ -0.53
CTNNA1-226ENST00000521368 APOL3O95236 402 aa11.76□□□□□ -0.53
CTNNA1-226ENST00000521368 SLC2A1P11166 492 aa11.76□□□□□ -0.53
CTNNA1-226ENST00000521368 NAT2P11245 290 aa11.76□□□□□ -0.53
CTNNA1-226ENST00000521368 CFL1P23528 166 aaKnown RBP11.76□□□□□ -0.53
CTNNA1-226ENST00000521368 ZNF81P51508 661 aa11.76□□□□□ -0.53
CTNNA1-226ENST00000521368 MMP16P51512 607 aa11.76□□□□□ -0.53
CTNNA1-226ENST00000521368 AQP4P55087 323 aa11.76□□□□□ -0.53
CTNNA1-226ENST00000521368 DSCR9P59020 149 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms