RNA–Protein interactions for RNA: ENST00000521049.5

TRAM1-204, Transcript of translocation associated membrane protein 1, human

TSL 5

Gene TRAM1, Length 872 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRAM1-204	ENST00000521049	PLPP7	Q8NBV4	271 aa		13.57	□□□□□ -0.24
TRAM1-204	ENST00000521049	LRTOMT	Q8WZ04	291 aa		13.57	□□□□□ -0.24
TRAM1-204	ENST00000521049	LZIC	Q8WZA0	190 aa		13.57	□□□□□ -0.24
TRAM1-204	ENST00000521049	LHX4	Q969G2	390 aa		13.57	□□□□□ -0.24
TRAM1-204	ENST00000521049	SLC22A4	Q9H015	551 aa		13.57	□□□□□ -0.24
TRAM1-204	ENST00000521049	MMADHC	Q9H3L0	296 aa	Predicted RBP	13.57	□□□□□ -0.24
TRAM1-204	ENST00000521049	WDR76	Q9H967	626 aa		13.57	□□□□□ -0.24
TRAM1-204	ENST00000521049	NRIP3	Q9NQ35	241 aa		13.57	□□□□□ -0.24
TRAM1-204	ENST00000521049	UFSP2	Q9NUQ7	469 aa		13.57	□□□□□ -0.24
TRAM1-204	ENST00000521049	RHCG	Q9UBD6	479 aa		13.57	□□□□□ -0.24
TRAM1-204	ENST00000521049	DOCK11	Q5JSL3	2073 aa		13.56	□□□□□ -0.24
TRAM1-204	ENST00000521049	FXYD1	O00168	92 aa		13.56	□□□□□ -0.24
TRAM1-204	ENST00000521049	FFAR1	O14842	300 aa		13.56	□□□□□ -0.24
TRAM1-204	ENST00000521049	PTP4A3	O75365	173 aa		13.56	□□□□□ -0.24
TRAM1-204	ENST00000521049	TSPAN9	O75954	239 aa		13.56	□□□□□ -0.24
TRAM1-204	ENST00000521049	ALX3	O95076	343 aa		13.56	□□□□□ -0.24
TRAM1-204	ENST00000521049	ECD	O95905	644 aa	Predicted RBP	13.56	□□□□□ -0.24
TRAM1-204	ENST00000521049	SDHA	P31040	664 aa		13.56	□□□□□ -0.24
TRAM1-204	ENST00000521049	ARF6	P62330	175 aa		13.56	□□□□□ -0.24
TRAM1-204	ENST00000521049	KRR1	Q13601	381 aa	Known RBP	13.56	□□□□□ -0.24
TRAM1-204	ENST00000521049	GK2	Q14410	553 aa	Predicted RBP	13.56	□□□□□ -0.24
TRAM1-204	ENST00000521049	KRTAP27-1	Q3LI81	207 aa		13.56	□□□□□ -0.24
TRAM1-204	ENST00000521049	LRRC23	Q53EV4	343 aa	Predicted RBP	13.56	□□□□□ -0.24
TRAM1-204	ENST00000521049	PRAMEF6	Q5VXH4	476 aa		13.56	□□□□□ -0.24
TRAM1-204	ENST00000521049	SFRP4	Q6FHJ7	346 aa	Predicted RBP	13.56	□□□□□ -0.24
TRAM1-204	ENST00000521049	TBPL2	Q6SJ96	375 aa		13.56	□□□□□ -0.24
TRAM1-204	ENST00000521049	SCCPDH	Q8NBX0	429 aa		13.56	□□□□□ -0.24
TRAM1-204	ENST00000521049	NUAK2	Q9H093	628 aa		13.56	□□□□□ -0.24
TRAM1-204	ENST00000521049	FN3KRP	Q9HA64	309 aa		13.56	□□□□□ -0.24
TRAM1-204	ENST00000521049	POLR1D	Q9Y2S0	133 aa		13.56	□□□□□ -0.24
TRAM1-204	ENST00000521049	NOP16	Q9Y3C1	178 aa	Known RBP	13.56	□□□□□ -0.24
TRAM1-204	ENST00000521049	SNX13	Q9Y5W8	968 aa		13.56	□□□□□ -0.24
TRAM1-204	ENST00000521049	LHFPL6	Q9Y693	200 aa		13.56	□□□□□ -0.24
TRAM1-204	ENST00000521049	TRAV38-1	A0A0B4J264	116 aa		13.55	□□□□□ -0.24
TRAM1-204	ENST00000521049	ELOVL7	A1L3X0	281 aa		13.55	□□□□□ -0.24
TRAM1-204	ENST00000521049		J3KTA2	159 aa		13.55	□□□□□ -0.24
TRAM1-204	ENST00000521049	ADAM20	O43506	726 aa		13.55	□□□□□ -0.24
TRAM1-204	ENST00000521049	NDUFB2	O95178	105 aa		13.55	□□□□□ -0.24
TRAM1-204	ENST00000521049	PTBP3	O95758	552 aa	Known RBP	13.55	□□□□□ -0.24
TRAM1-204	ENST00000521049	IFNW1	P05000	195 aa		13.55	□□□□□ -0.24
TRAM1-204	ENST00000521049	CSF1	P09603	554 aa		13.55	□□□□□ -0.24
TRAM1-204	ENST00000521049	GPR4	P46093	362 aa		13.55	□□□□□ -0.24
TRAM1-204	ENST00000521049	COX10	Q12887	443 aa		13.55	□□□□□ -0.24
TRAM1-204	ENST00000521049	MALL	Q13021	153 aa		13.55	□□□□□ -0.24
TRAM1-204	ENST00000521049	BEAN1	Q3B7T3	259 aa		13.55	□□□□□ -0.24
TRAM1-204	ENST00000521049	COQ5	Q5HYK3	327 aa		13.55	□□□□□ -0.24
TRAM1-204	ENST00000521049	RRM2B	Q7LG56	351 aa		13.55	□□□□□ -0.24
TRAM1-204	ENST00000521049	ADCK1	Q86TW2	530 aa		13.55	□□□□□ -0.24
TRAM1-204	ENST00000521049	NPRL2	Q8WTW4	380 aa		13.55	□□□□□ -0.24
TRAM1-204	ENST00000521049	DYDC1	Q8WWB3	177 aa		13.55	□□□□□ -0.24
TRAM1-204	ENST00000521049	SLCO4A1	Q96BD0	722 aa		13.55	□□□□□ -0.24
TRAM1-204	ENST00000521049	GPX7	Q96SL4	187 aa	Predicted RBP	13.55	□□□□□ -0.24
TRAM1-204	ENST00000521049	RASSF4	Q9H2L5	321 aa		13.55	□□□□□ -0.24
TRAM1-204	ENST00000521049	CNTD2	Q9H8S5	307 aa		13.55	□□□□□ -0.24
TRAM1-204	ENST00000521049	RPS6KA6	Q9UK32	745 aa		13.55	□□□□□ -0.24
TRAM1-204	ENST00000521049	FAM96B	Q9Y3D0	163 aa		13.55	□□□□□ -0.24
TRAM1-204	ENST00000521049	FAM220BP	B1ANY3	271 aa		13.54	□□□□□ -0.24
TRAM1-204	ENST00000521049	IMPA2	O14732	288 aa		13.54	□□□□□ -0.24
TRAM1-204	ENST00000521049	GMDS	O60547	372 aa		13.54	□□□□□ -0.24
TRAM1-204	ENST00000521049	ACSM4	P0C7M7	580 aa		13.54	□□□□□ -0.24
TRAM1-204	ENST00000521049	CRABP1	P29762	137 aa		13.54	□□□□□ -0.24
TRAM1-204	ENST00000521049	ECH1	Q13011	328 aa		13.54	□□□□□ -0.24
TRAM1-204	ENST00000521049	OR8G1	Q15617	311 aa		13.54	□□□□□ -0.24
TRAM1-204	ENST00000521049	OR8B8	Q15620	311 aa		13.54	□□□□□ -0.24
TRAM1-204	ENST00000521049	KPRP	Q5T749	579 aa	Predicted RBP	13.54	□□□□□ -0.24
TRAM1-204	ENST00000521049	PGAP1	Q75T13	922 aa		13.54	□□□□□ -0.24
TRAM1-204	ENST00000521049	BTN2A1	Q7KYR7	527 aa		13.54	□□□□□ -0.24
TRAM1-204	ENST00000521049	SPRYD4	Q8WW59	207 aa	Predicted RBP	13.54	□□□□□ -0.24
TRAM1-204	ENST00000521049	SMURF1	Q9HCE7	757 aa		13.54	□□□□□ -0.24
TRAM1-204	ENST00000521049	SIGLEC7	Q9Y286	467 aa		13.54	□□□□□ -0.24
TRAM1-204	ENST00000521049	TMEM5	Q9Y2B1	443 aa		13.54	□□□□□ -0.24
TRAM1-204	ENST00000521049	CAB39	Q9Y376	341 aa	Predicted RBP	13.54	□□□□□ -0.24
TRAM1-204	ENST00000521049	KPTN	Q9Y664	436 aa		13.54	□□□□□ -0.24
TRAM1-204	ENST00000521049	ZNF816-ZNF321P	A0A0X1KG74	233 aa		13.53	□□□□□ -0.24
TRAM1-204	ENST00000521049	OOEP	A6NGQ2	149 aa		13.53	□□□□□ -0.24
TRAM1-204	ENST00000521049	C3orf80	F5H4A9	247 aa		13.53	□□□□□ -0.24
TRAM1-204	ENST00000521049		F5H5K5	113 aa		13.53	□□□□□ -0.24
TRAM1-204	ENST00000521049	TXNDC12	O95881	172 aa		13.53	□□□□□ -0.24
TRAM1-204	ENST00000521049	TGFBR2	P37173	567 aa		13.53	□□□□□ -0.24
TRAM1-204	ENST00000521049	CDKN2A	P42771	156 aa	Known RBP	13.53	□□□□□ -0.24
TRAM1-204	ENST00000521049	HOXA4	Q00056	320 aa	Predicted RBP	13.53	□□□□□ -0.24
TRAM1-204	ENST00000521049	MEP1B	Q16820	701 aa		13.53	□□□□□ -0.24
TRAM1-204	ENST00000521049	CDON	Q4KMG0	1287 aa		13.53	□□□□□ -0.24
TRAM1-204	ENST00000521049	DHRS7B	Q6IAN0	325 aa	Predicted RBP	13.53	□□□□□ -0.24
TRAM1-204	ENST00000521049	DNM1P34	Q6PK57	102 aa		13.53	□□□□□ -0.24
TRAM1-204	ENST00000521049	CORO6	Q6QEF8	472 aa		13.53	□□□□□ -0.24
TRAM1-204	ENST00000521049	PTCHD4	Q6ZW05	846 aa		13.53	□□□□□ -0.24
TRAM1-204	ENST00000521049	BOLL	Q8N9W6	283 aa	Known RBP	13.53	□□□□□ -0.24
TRAM1-204	ENST00000521049	OR2T12	Q8NG77	320 aa		13.53	□□□□□ -0.24
TRAM1-204	ENST00000521049	DMRTB1	Q96MA1	342 aa		13.53	□□□□□ -0.24
TRAM1-204	ENST00000521049	SIKE1	Q9BRV8	207 aa		13.53	□□□□□ -0.24
TRAM1-204	ENST00000521049	ANKRD19P	Q9H560	264 aa		13.53	□□□□□ -0.24
TRAM1-204	ENST00000521049	KAAG1	Q9UBP8	84 aa		13.53	□□□□□ -0.24
TRAM1-204	ENST00000521049	IER3IP1	Q9Y5U9	82 aa		13.53	□□□□□ -0.24
TRAM1-204	ENST00000521049	BTBD17	A6NE02	478 aa		13.52	□□□□□ -0.25
TRAM1-204	ENST00000521049		G3V4G9	280 aa		13.52	□□□□□ -0.25
TRAM1-204	ENST00000521049	SOCS2	O14508	198 aa		13.52	□□□□□ -0.25
TRAM1-204	ENST00000521049	PPP1R3D	O95685	299 aa		13.52	□□□□□ -0.25
TRAM1-204	ENST00000521049	LCAT	P04180	440 aa		13.52	□□□□□ -0.25
TRAM1-204	ENST00000521049	CA6	P23280	308 aa		13.52	□□□□□ -0.25

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