RNA–Protein interactions for RNA: ENST00000521037.1

VPS13B-208, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-208ENST00000521037 GPR141Q7Z602 305 aa3.09□□□□□ -1.91
VPS13B-208ENST00000521037 LRRC34Q8IZ02 419 aa3.09□□□□□ -1.91
VPS13B-208ENST00000521037 C1orf87Q8N0U7 546 aa3.09□□□□□ -1.91
VPS13B-208ENST00000521037 ARHGAP24Q8N264 748 aa3.09□□□□□ -1.91
VPS13B-208ENST00000521037 MUC20Q8N307 709 aaPredicted RBP3.09□□□□□ -1.91
VPS13B-208ENST00000521037 SLC43A2Q8N370 569 aa3.09□□□□□ -1.91
VPS13B-208ENST00000521037 TBC1D19Q8N5T2 526 aa3.09□□□□□ -1.91
VPS13B-208ENST00000521037 C7orf57Q8NEG2 295 aa3.09□□□□□ -1.91
VPS13B-208ENST00000521037 OR7G2Q8NG99 324 aa3.09□□□□□ -1.91
VPS13B-208ENST00000521037 OR56B1Q8NGI3 324 aa3.09□□□□□ -1.91
VPS13B-208ENST00000521037 CCDC107Q8WV48 283 aa3.09□□□□□ -1.91
VPS13B-208ENST00000521037 ANKRD49Q8WVL7 239 aa3.09□□□□□ -1.91
VPS13B-208ENST00000521037 C10orf82Q8WW14 230 aa3.09□□□□□ -1.91
VPS13B-208ENST00000521037 THRSPQ92748 146 aa3.09□□□□□ -1.91
VPS13B-208ENST00000521037 ITCHQ96J02 903 aa3.09□□□□□ -1.91
VPS13B-208ENST00000521037 MAGEB18Q96M61 343 aa3.09□□□□□ -1.91
VPS13B-208ENST00000521037 TSPAN32Q96QS1 320 aa3.09□□□□□ -1.91
VPS13B-208ENST00000521037 ASCL2Q99929 193 aa3.09□□□□□ -1.91
VPS13B-208ENST00000521037 SPAG8Q99932 426 aaPredicted RBP3.09□□□□□ -1.91
VPS13B-208ENST00000521037 SH3GL3Q99963 347 aa3.09□□□□□ -1.91
VPS13B-208ENST00000521037 ACPTQ9BZG2 426 aa3.09□□□□□ -1.91
VPS13B-208ENST00000521037 SEMA6AQ9H2E6 1030 aa3.09□□□□□ -1.91
VPS13B-208ENST00000521037 Q9H8V8 135 aa3.09□□□□□ -1.91
VPS13B-208ENST00000521037 NOX4Q9NPH5 578 aa3.09□□□□□ -1.91
VPS13B-208ENST00000521037 SAR1AQ9NR31 198 aa3.09□□□□□ -1.91
VPS13B-208ENST00000521037 GSN-AS1Q9NRJ2 163 aa3.09□□□□□ -1.91
VPS13B-208ENST00000521037 ATAD3AQ9NVI7 634 aa3.09□□□□□ -1.91
VPS13B-208ENST00000521037 MS4A12Q9NXJ0 267 aa3.09□□□□□ -1.91
VPS13B-208ENST00000521037 NKIRAS1Q9NYS0 192 aa3.09□□□□□ -1.91
VPS13B-208ENST00000521037 MSRB1Q9NZV6 116 aa3.09□□□□□ -1.91
VPS13B-208ENST00000521037 BAIAP2L1Q9UHR4 511 aa3.09□□□□□ -1.91
VPS13B-208ENST00000521037 PHF11Q9UIL8 331 aa3.09□□□□□ -1.91
VPS13B-208ENST00000521037 AMDHD2Q9Y303 409 aa3.09□□□□□ -1.91
VPS13B-208ENST00000521037 SBDSQ9Y3A5 250 aaKnown RBP eCLIP3.09□□□□□ -1.91
VPS13B-208ENST00000521037 LRRC42Q9Y546 428 aa3.09□□□□□ -1.91
VPS13B-208ENST00000521037 A0A087WZY1 265 aa3.08□□□□□ -1.92
VPS13B-208ENST00000521037 ARPC4-TTLL3A0A0A6YYG9 625 aa3.08□□□□□ -1.92
VPS13B-208ENST00000521037 TRAV40A0A0B4J280 105 aa3.08□□□□□ -1.92
VPS13B-208ENST00000521037 A0A1B0GVY2 172 aa3.08□□□□□ -1.92
VPS13B-208ENST00000521037 FAM230AA0A1W2PPH8 454 aa3.08□□□□□ -1.92
VPS13B-208ENST00000521037 CIB4A0PJX0 185 aa3.08□□□□□ -1.92
VPS13B-208ENST00000521037 ANKDD1BA6NHY2 528 aa3.08□□□□□ -1.92
VPS13B-208ENST00000521037 C15orf62A8K5M9 175 aa3.08□□□□□ -1.92
VPS13B-208ENST00000521037 E5RI56 91 aa3.08□□□□□ -1.92
VPS13B-208ENST00000521037 F8VVB4 439 aa3.08□□□□□ -1.92
VPS13B-208ENST00000521037 F8VWA3 439 aa3.08□□□□□ -1.92
VPS13B-208ENST00000521037 MS4A18H0YCH9 400 aa3.08□□□□□ -1.92
VPS13B-208ENST00000521037 UBXN8O00124 270 aa3.08□□□□□ -1.92
VPS13B-208ENST00000521037 SLC28A1O00337 649 aa3.08□□□□□ -1.92
VPS13B-208ENST00000521037 ZNF195O14628 629 aa3.08□□□□□ -1.92
VPS13B-208ENST00000521037 PSMD3O43242 534 aa3.08□□□□□ -1.92
VPS13B-208ENST00000521037 ANGPTL7O43827 346 aa3.08□□□□□ -1.92
VPS13B-208ENST00000521037 FCN3O75636 299 aa3.08□□□□□ -1.92
VPS13B-208ENST00000521037 TTC4O95801 387 aa3.08□□□□□ -1.92
VPS13B-208ENST00000521037 ALPLP05186 524 aa3.08□□□□□ -1.92
VPS13B-208ENST00000521037 FGF2P09038 288 aa3.08□□□□□ -1.92
VPS13B-208ENST00000521037 PABPC4LP0CB38 370 aaKnown RBP3.08□□□□□ -1.92
VPS13B-208ENST00000521037 CD28P10747 220 aa3.08□□□□□ -1.92
VPS13B-208ENST00000521037 IRF2P14316 349 aa3.08□□□□□ -1.92
VPS13B-208ENST00000521037 CALB2P22676 271 aa3.08□□□□□ -1.92
VPS13B-208ENST00000521037 RPL3P39023 403 aaKnown RBP3.08□□□□□ -1.92
VPS13B-208ENST00000521037 CETN2P41208 172 aa3.08□□□□□ -1.92
VPS13B-208ENST00000521037 SSR2P43308 183 aa3.08□□□□□ -1.92
VPS13B-208ENST00000521037 CNN1P51911 297 aaKnown RBP3.08□□□□□ -1.92
VPS13B-208ENST00000521037 PLTPP55058 493 aa3.08□□□□□ -1.92
VPS13B-208ENST00000521037 RWDD2BP57060 319 aa3.08□□□□□ -1.92
VPS13B-208ENST00000521037 NCALDP61601 193 aa3.08□□□□□ -1.92
VPS13B-208ENST00000521037 MRPS25P82663 173 aaKnown RBP3.08□□□□□ -1.92
VPS13B-208ENST00000521037 SARNPP82979 210 aaKnown RBP3.08□□□□□ -1.92
VPS13B-208ENST00000521037 CHIT1Q13231 466 aa3.08□□□□□ -1.92
VPS13B-208ENST00000521037 MAJINQ3KP22 176 aa3.08□□□□□ -1.92
VPS13B-208ENST00000521037 TMEM176BQ3YBM2 270 aaPredicted RBP3.08□□□□□ -1.92
VPS13B-208ENST00000521037 SLC25A53Q5H9E4 307 aa3.08□□□□□ -1.92
VPS13B-208ENST00000521037 ZNF311Q5JNZ3 666 aa3.08□□□□□ -1.92
VPS13B-208ENST00000521037 AP1ARQ63HQ0 302 aa3.08□□□□□ -1.92
VPS13B-208ENST00000521037 OR52E8Q6IFG1 317 aa3.08□□□□□ -1.92
VPS13B-208ENST00000521037 ZNF770Q6IQ21 691 aaPredicted RBP3.08□□□□□ -1.92
VPS13B-208ENST00000521037 SLC48A1Q6P1K1 146 aa3.08□□□□□ -1.92
VPS13B-208ENST00000521037 CCDC137Q6PK04 289 aaKnown RBP3.08□□□□□ -1.92
VPS13B-208ENST00000521037 CBLN3Q6UW01 205 aa3.08□□□□□ -1.92
VPS13B-208ENST00000521037 CD164L2Q6UWJ8 174 aa3.08□□□□□ -1.92
VPS13B-208ENST00000521037 SLC16A12Q6ZSM3 486 aa3.08□□□□□ -1.92
VPS13B-208ENST00000521037 ASRGL1Q7L266 308 aa3.08□□□□□ -1.92
VPS13B-208ENST00000521037 NUDT13Q86X67 352 aa3.08□□□□□ -1.92
VPS13B-208ENST00000521037 LAX1Q8IWV1 398 aa3.08□□□□□ -1.92
VPS13B-208ENST00000521037 RNF148Q8N7C7 305 aa3.08□□□□□ -1.92
VPS13B-208ENST00000521037 FAM71CQ8NEG0 241 aa3.08□□□□□ -1.92
VPS13B-208ENST00000521037 OR52E2Q8NGJ4 325 aa3.08□□□□□ -1.92
VPS13B-208ENST00000521037 OR52M1Q8NGK5 317 aa3.08□□□□□ -1.92
VPS13B-208ENST00000521037 OR5M8Q8NGP6 311 aa3.08□□□□□ -1.92
VPS13B-208ENST00000521037 OR5R1Q8NH85 324 aa3.08□□□□□ -1.92
VPS13B-208ENST00000521037 FBXO25Q8TCJ0 367 aa3.08□□□□□ -1.92
VPS13B-208ENST00000521037 ZNF675Q8TD23 568 aa3.08□□□□□ -1.92
VPS13B-208ENST00000521037 ZFP90Q8TF47 636 aa3.08□□□□□ -1.92
VPS13B-208ENST00000521037 RCHY1Q96PM5 261 aa3.08□□□□□ -1.92
VPS13B-208ENST00000521037 SIGLEC11Q96RL6 698 aa3.08□□□□□ -1.92
VPS13B-208ENST00000521037 RBBP8Q99708 897 aa3.08□□□□□ -1.92
VPS13B-208ENST00000521037 TPPP3Q9BW30 176 aa3.08□□□□□ -1.92
VPS13B-208ENST00000521037 ZNF416Q9BWM5 594 aa3.08□□□□□ -1.92
VPS13B-208ENST00000521037 FRMD8P1Q9BZ68 369 aaPredicted RBP3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms