RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 TAS2R16Q9NYV7 291 aa2.52□□□□□ -2.01
HMGB1P41-201ENST00000520234 CCDC167Q9P0B6 97 aa2.52□□□□□ -2.01
HMGB1P41-201ENST00000520234 EMC3Q9P0I2 261 aa2.52□□□□□ -2.01
HMGB1P41-201ENST00000520234 SLC2A6Q9UGQ3 507 aa2.52□□□□□ -2.01
HMGB1P41-201ENST00000520234 ZNF107Q9UII5 783 aaPredicted RBP2.52□□□□□ -2.01
HMGB1P41-201ENST00000520234 BTNL2Q9UIR0 455 aa2.52□□□□□ -2.01
HMGB1P41-201ENST00000520234 C3orf18Q9UK00 162 aa2.52□□□□□ -2.01
HMGB1P41-201ENST00000520234 RNF24Q9Y225 148 aa2.52□□□□□ -2.01
HMGB1P41-201ENST00000520234 ENTPD4Q9Y227 616 aa2.52□□□□□ -2.01
HMGB1P41-201ENST00000520234 SLC9A8Q9Y2E8 581 aa2.52□□□□□ -2.01
HMGB1P41-201ENST00000520234 DNAJC15Q9Y5T4 150 aa2.52□□□□□ -2.01
HMGB1P41-201ENST00000520234 SCN1AP35498 2009 aa2.52□□□□□ -2.01
HMGB1P41-201ENST00000520234 DOCK4Q8N1I0 1966 aa2.52□□□□□ -2.01
HMGB1P41-201ENST00000520234 BPTFQ12830 3046 aa2.52□□□□□ -2.01
HMGB1P41-201ENST00000520234 SYNJ2BP-COX16A0A087WUM0 186 aa2.51□□□□□ -2.01
HMGB1P41-201ENST00000520234 MEIKINA0A087WXM9 373 aa2.51□□□□□ -2.01
HMGB1P41-201ENST00000520234 CCDC182A6NF36 153 aa2.51□□□□□ -2.01
HMGB1P41-201ENST00000520234 ARGFXA6NJG6 315 aa2.51□□□□□ -2.01
HMGB1P41-201ENST00000520234 SLC9B1P1A6NJY1 282 aa2.51□□□□□ -2.01
HMGB1P41-201ENST00000520234 E5RI56 91 aa2.51□□□□□ -2.01
HMGB1P41-201ENST00000520234 ZNF670-ZNF695F2Z2N8 137 aa2.51□□□□□ -2.01
HMGB1P41-201ENST00000520234 M0QZ92 97 aa2.51□□□□□ -2.01
HMGB1P41-201ENST00000520234 AIPO00170 330 aa2.51□□□□□ -2.01
HMGB1P41-201ENST00000520234 TLR4O00206 839 aa2.51□□□□□ -2.01
HMGB1P41-201ENST00000520234 DFFAO00273 331 aa2.51□□□□□ -2.01
HMGB1P41-201ENST00000520234 AZIN1O14977 448 aa2.51□□□□□ -2.01
HMGB1P41-201ENST00000520234 CASC3O15234 703 aaKnown RBP2.51□□□□□ -2.01
HMGB1P41-201ENST00000520234 NUPL2O15504 423 aaKnown RBP2.51□□□□□ -2.01
HMGB1P41-201ENST00000520234 RGS5O15539 181 aa2.51□□□□□ -2.01
HMGB1P41-201ENST00000520234 KDELR3O43731 214 aa2.51□□□□□ -2.01
HMGB1P41-201ENST00000520234 SRPX2O60687 465 aaPredicted RBP2.51□□□□□ -2.01
HMGB1P41-201ENST00000520234 EIF3GO75821 320 aaKnown RBP eCLIP2.51□□□□□ -2.01
HMGB1P41-201ENST00000520234 VENTXO95231 258 aa2.51□□□□□ -2.01
HMGB1P41-201ENST00000520234 SYNGR4O95473 234 aa2.51□□□□□ -2.01
HMGB1P41-201ENST00000520234 APBB3O95704 486 aa2.51□□□□□ -2.01
HMGB1P41-201ENST00000520234 CXCL14O95715 111 aa2.51□□□□□ -2.01
HMGB1P41-201ENST00000520234 FADS2O95864 444 aaKnown RBP2.51□□□□□ -2.01
HMGB1P41-201ENST00000520234 PTHP01270 115 aa2.51□□□□□ -2.01
HMGB1P41-201ENST00000520234 IFNA7P01567 189 aa2.51□□□□□ -2.01
HMGB1P41-201ENST00000520234 FGF1P05230 155 aa2.51□□□□□ -2.01
HMGB1P41-201ENST00000520234 SULT1A3P0DMM9 295 aa2.51□□□□□ -2.01
HMGB1P41-201ENST00000520234 SULT1A4P0DMN0 295 aa2.51□□□□□ -2.01
HMGB1P41-201ENST00000520234 HPGDP15428 266 aa2.51□□□□□ -2.01
HMGB1P41-201ENST00000520234 CXCL3P19876 107 aa2.51□□□□□ -2.01
HMGB1P41-201ENST00000520234 AZU1P20160 251 aa2.51□□□□□ -2.01
HMGB1P41-201ENST00000520234 S100PP25815 95 aa2.51□□□□□ -2.01
HMGB1P41-201ENST00000520234 PAX6P26367 422 aa2.51□□□□□ -2.01
HMGB1P41-201ENST00000520234 PSMB9P28065 219 aa2.51□□□□□ -2.01
HMGB1P41-201ENST00000520234 PTPN6P29350 595 aa2.51□□□□□ -2.01
HMGB1P41-201ENST00000520234 GPX4P36969 197 aaPredicted RBP2.51□□□□□ -2.01
HMGB1P41-201ENST00000520234 CEACAM6P40199 344 aa2.51□□□□□ -2.01
HMGB1P41-201ENST00000520234 RFC3P40938 356 aa2.51□□□□□ -2.01
HMGB1P41-201ENST00000520234 CSKP41240 450 aa2.51□□□□□ -2.01
HMGB1P41-201ENST00000520234 POU3F4P49335 361 aa2.51□□□□□ -2.01
HMGB1P41-201ENST00000520234 STC1P52823 247 aa2.51□□□□□ -2.01
HMGB1P41-201ENST00000520234 MFAP2P55001 183 aa2.51□□□□□ -2.01
HMGB1P41-201ENST00000520234 CDKN2DP55273 166 aa2.51□□□□□ -2.01
HMGB1P41-201ENST00000520234 RAG2P55895 527 aa2.51□□□□□ -2.01
HMGB1P41-201ENST00000520234 STARD6P59095 220 aa2.51□□□□□ -2.01
HMGB1P41-201ENST00000520234 RPS4XP62701 263 aaKnown RBP2.51□□□□□ -2.01
HMGB1P41-201ENST00000520234 SLC10A7Q0GE19 358 aa2.51□□□□□ -2.01
HMGB1P41-201ENST00000520234 ELP6Q0PNE2 266 aa2.51□□□□□ -2.01
HMGB1P41-201ENST00000520234 RUNX3Q13761 415 aa2.51□□□□□ -2.01
HMGB1P41-201ENST00000520234 DGCR6Q14129 220 aa2.51□□□□□ -2.01
HMGB1P41-201ENST00000520234 SERTAD2Q14140 314 aa2.51□□□□□ -2.01
HMGB1P41-201ENST00000520234 CRMP1Q14194 572 aa2.51□□□□□ -2.01
HMGB1P41-201ENST00000520234 ABRAXAS2Q15018 415 aa2.51□□□□□ -2.01
HMGB1P41-201ENST00000520234 QPRTQ15274 297 aa2.51□□□□□ -2.01
HMGB1P41-201ENST00000520234 TAF1AQ15573 450 aaPredicted RBP2.51□□□□□ -2.01
HMGB1P41-201ENST00000520234 TSC22D1Q15714 1073 aa2.51□□□□□ -2.01
HMGB1P41-201ENST00000520234 GUCA2BQ16661 112 aa2.51□□□□□ -2.01
HMGB1P41-201ENST00000520234 VPS26BQ4G0F5 336 aa2.51□□□□□ -2.01
HMGB1P41-201ENST00000520234 HSD17B12Q53GQ0 312 aa2.51□□□□□ -2.01
HMGB1P41-201ENST00000520234 CARD16Q5EG05 197 aa2.51□□□□□ -2.01
HMGB1P41-201ENST00000520234 MS4A13Q5J8X5 152 aa2.51□□□□□ -2.01
HMGB1P41-201ENST00000520234 LCE3CQ5T5A8 94 aa2.51□□□□□ -2.01
HMGB1P41-201ENST00000520234 PRAMEF7Q5VXH5 474 aa2.51□□□□□ -2.01
HMGB1P41-201ENST00000520234 FRMPD2BQ6IN97 320 aa2.51□□□□□ -2.01
HMGB1P41-201ENST00000520234 PLBD1Q6P4A8 553 aa2.51□□□□□ -2.01
HMGB1P41-201ENST00000520234 METAP1DQ6UB28 335 aaPredicted RBP2.51□□□□□ -2.01
HMGB1P41-201ENST00000520234 ENPP6Q6UWR7 440 aa2.51□□□□□ -2.01
HMGB1P41-201ENST00000520234 VITQ6UXI7 678 aa2.51□□□□□ -2.01
HMGB1P41-201ENST00000520234 NPSR1Q6W5P4 371 aa2.51□□□□□ -2.01
HMGB1P41-201ENST00000520234 TMPRSS11AQ6ZMR5 421 aa2.51□□□□□ -2.01
HMGB1P41-201ENST00000520234 RTL4Q6ZR62 310 aa2.51□□□□□ -2.01
HMGB1P41-201ENST00000520234 C16orf62Q7Z3J2 963 aa2.51□□□□□ -2.01
HMGB1P41-201ENST00000520234 RANBP3LQ86VV4 465 aaPredicted RBP2.51□□□□□ -2.01
HMGB1P41-201ENST00000520234 PAQR7Q86WK9 346 aa2.51□□□□□ -2.01
HMGB1P41-201ENST00000520234 ENTHD1Q8IYW4 607 aa2.51□□□□□ -2.01
HMGB1P41-201ENST00000520234 UBE2J2Q8N2K1 259 aa2.51□□□□□ -2.01
HMGB1P41-201ENST00000520234 CLDN22Q8N7P3 220 aa2.51□□□□□ -2.01
HMGB1P41-201ENST00000520234 ZNF555Q8NEP9 628 aa2.51□□□□□ -2.01
HMGB1P41-201ENST00000520234 IPMKQ8NFU5 416 aa2.51□□□□□ -2.01
HMGB1P41-201ENST00000520234 OR1M1Q8NGA1 313 aa2.51□□□□□ -2.01
HMGB1P41-201ENST00000520234 OR4F6Q8NGB9 312 aa2.51□□□□□ -2.01
HMGB1P41-201ENST00000520234 OR8J3Q8NGG0 315 aa2.51□□□□□ -2.01
HMGB1P41-201ENST00000520234 OR6T1Q8NGN1 323 aa2.51□□□□□ -2.01
HMGB1P41-201ENST00000520234 ITFG1Q8TB96 612 aa2.51□□□□□ -2.01
HMGB1P41-201ENST00000520234 ZPLD1Q8TCW7 415 aa2.51□□□□□ -2.01
HMGB1P41-201ENST00000520234 AGR3Q8TD06 166 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms