RNA–Protein interactions for RNA: ENST00000519481.5

PVT1-208, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 542 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-208ENST00000519481 SLC22A4Q9H015 551 aa9.11□□□□□ -0.95
PVT1-208ENST00000519481 NSRP1Q9H0G5 558 aaKnown RBP9.11□□□□□ -0.95
PVT1-208ENST00000519481 GORASP2Q9H8Y8 452 aa9.11□□□□□ -0.95
PVT1-208ENST00000519481 WDR76Q9H967 626 aa9.11□□□□□ -0.95
PVT1-208ENST00000519481 MED4Q9NPJ6 270 aa9.11□□□□□ -0.95
PVT1-208ENST00000519481 RPRD1BQ9NQG5 326 aaKnown RBP9.11□□□□□ -0.95
PVT1-208ENST00000519481 KIF17Q9P2E2 1029 aa9.11□□□□□ -0.95
PVT1-208ENST00000519481 CLN8Q9UBY8 286 aa9.11□□□□□ -0.95
PVT1-208ENST00000519481 MAGEL2Q9UJ55 1249 aa9.11□□□□□ -0.95
PVT1-208ENST00000519481 KCNG2Q9UJ96 466 aa9.11□□□□□ -0.95
PVT1-208ENST00000519481 V9GYQ6 96 aa9.11□□□□□ -0.95
PVT1-208ENST00000519481 IGHV3-64DA0A0J9YX35 117 aa9.1□□□□□ -0.95
PVT1-208ENST00000519481 POM121CA8CG34 1229 aa9.1□□□□□ -0.95
PVT1-208ENST00000519481 DCTN6O00399 190 aa9.1□□□□□ -0.95
PVT1-208ENST00000519481 MLNRO43193 412 aa9.1□□□□□ -0.95
PVT1-208ENST00000519481 RNASE1P07998 156 aaKnown RBP9.1□□□□□ -0.95
PVT1-208ENST00000519481 ACSM4P0C7M7 580 aa9.1□□□□□ -0.95
PVT1-208ENST00000519481 HIST1H1CP16403 213 aaKnown RBP9.1□□□□□ -0.95
PVT1-208ENST00000519481 RBMXP38159 391 aaKnown RBP9.1□□□□□ -0.95
PVT1-208ENST00000519481 TRAP1Q12931 704 aaKnown RBP9.1□□□□□ -0.95
PVT1-208ENST00000519481 OR8G1Q15617 311 aa9.1□□□□□ -0.95
PVT1-208ENST00000519481 ZNF404Q494X3 552 aa9.1□□□□□ -0.95
PVT1-208ENST00000519481 SLC18B1Q6NT16 456 aa9.1□□□□□ -0.95
PVT1-208ENST00000519481 DCDC5Q6ZRR9 648 aa9.1□□□□□ -0.95
PVT1-208ENST00000519481 COLCA1Q6ZS62 124 aa9.1□□□□□ -0.95
PVT1-208ENST00000519481 LINC00346Q8IVM7 164 aa9.1□□□□□ -0.95
PVT1-208ENST00000519481 RNF148Q8N7C7 305 aa9.1□□□□□ -0.95
PVT1-208ENST00000519481 OR52L1Q8NGH7 329 aa9.1□□□□□ -0.95
PVT1-208ENST00000519481 GNPDA2Q8TDQ7 276 aa9.1□□□□□ -0.95
PVT1-208ENST00000519481 SPTSSAQ969W0 71 aa9.1□□□□□ -0.95
PVT1-208ENST00000519481 SLCO4A1Q96BD0 722 aa9.1□□□□□ -0.95
PVT1-208ENST00000519481 UPRTQ96BW1 309 aa9.1□□□□□ -0.95
PVT1-208ENST00000519481 NSMCE2Q96MF7 247 aa9.1□□□□□ -0.95
PVT1-208ENST00000519481 ELAC2Q9BQ52 826 aaKnown RBP9.1□□□□□ -0.95
PVT1-208ENST00000519481 NUDT16L1Q9BRJ7 211 aaKnown RBP9.1□□□□□ -0.95
PVT1-208ENST00000519481 FN3KRPQ9HA64 309 aa9.1□□□□□ -0.95
PVT1-208ENST00000519481 IGHV3OR16-10A0A075B7F0 116 aa9.09□□□□□ -0.95
PVT1-208ENST00000519481 TRAV40A0A0B4J280 105 aa9.09□□□□□ -0.95
PVT1-208ENST00000519481 KIR2DS1A0A191URI9 304 aa9.09□□□□□ -0.95
PVT1-208ENST00000519481 CLDN34H7C241 214 aa9.09□□□□□ -0.95
PVT1-208ENST00000519481 M0R135 149 aa9.09□□□□□ -0.95
PVT1-208ENST00000519481 PHYHO14832 338 aa9.09□□□□□ -0.95
PVT1-208ENST00000519481 TMPRSS2O15393 492 aa9.09□□□□□ -0.95
PVT1-208ENST00000519481 ENSAO43768 121 aaKnown RBP9.09□□□□□ -0.95
PVT1-208ENST00000519481 HLA-DPB1P04440 258 aa9.09□□□□□ -0.95
PVT1-208ENST00000519481 FABP3P05413 133 aa9.09□□□□□ -0.95
PVT1-208ENST00000519481 IGHV4-38-2P0DP08 117 aa9.09□□□□□ -0.95
PVT1-208ENST00000519481 GGT2P36268 569 aa9.09□□□□□ -0.95
PVT1-208ENST00000519481 CD200P41217 278 aa9.09□□□□□ -0.95
PVT1-208ENST00000519481 GATA4P43694 442 aa9.09□□□□□ -0.95
PVT1-208ENST00000519481 NPY4RP50391 375 aa9.09□□□□□ -0.95
PVT1-208ENST00000519481 BPIFB3P59826 476 aa9.09□□□□□ -0.95
PVT1-208ENST00000519481 TSPAN31Q12999 210 aa9.09□□□□□ -0.95
PVT1-208ENST00000519481 GK2Q14410 553 aaPredicted RBP9.09□□□□□ -0.95
PVT1-208ENST00000519481 TUSC1Q2TAM9 212 aa9.09□□□□□ -0.95
PVT1-208ENST00000519481 GPR157Q5UAW9 335 aa9.09□□□□□ -0.95
PVT1-208ENST00000519481 CD276Q5ZPR3 534 aa9.09□□□□□ -0.95
PVT1-208ENST00000519481 RPL13AP3Q6NVV1 102 aa9.09□□□□□ -0.95
PVT1-208ENST00000519481 CFAP77Q6ZQR2 320 aa9.09□□□□□ -0.95
PVT1-208ENST00000519481 C9orf139Q6ZV77 190 aa9.09□□□□□ -0.95
PVT1-208ENST00000519481 ZBTB46Q86UZ6 589 aa9.09□□□□□ -0.95
PVT1-208ENST00000519481 FAM86B1Q8N7N1 296 aa9.09□□□□□ -0.95
PVT1-208ENST00000519481 SDR9C7Q8NEX9 313 aa9.09□□□□□ -0.95
PVT1-208ENST00000519481 OR4C15Q8NGM1 316 aa9.09□□□□□ -0.95
PVT1-208ENST00000519481 Q8TCH9 128 aa9.09□□□□□ -0.95
PVT1-208ENST00000519481 ZNF799Q96GE5 643 aa9.09□□□□□ -0.95
PVT1-208ENST00000519481 ZNF48Q96MX3 618 aaPredicted RBP9.09□□□□□ -0.95
PVT1-208ENST00000519481 FUZQ9BT04 418 aa9.09□□□□□ -0.95
PVT1-208ENST00000519481 ZNF696Q9H7X3 374 aa9.09□□□□□ -0.95
PVT1-208ENST00000519481 UNKLQ9H9P5 680 aaKnown RBP9.09□□□□□ -0.95
PVT1-208ENST00000519481 TRIM36Q9NQ86 728 aa9.09□□□□□ -0.95
PVT1-208ENST00000519481 UFSP2Q9NUQ7 469 aa9.09□□□□□ -0.95
PVT1-208ENST00000519481 ERVK-18Q9QC07 812 aa9.09□□□□□ -0.95
PVT1-208ENST00000519481 CYB5R1Q9UHQ9 305 aa9.09□□□□□ -0.95
PVT1-208ENST00000519481 DOCK11Q5JSL3 2073 aa9.09□□□□□ -0.95
PVT1-208ENST00000519481 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.08□□□□□ -0.96
PVT1-208ENST00000519481 A0A1B0GWJ7 208 aa9.08□□□□□ -0.96
PVT1-208ENST00000519481 GGT3PA6NGU5 568 aa9.08□□□□□ -0.96
PVT1-208ENST00000519481 GMDSO60547 372 aa9.08□□□□□ -0.96
PVT1-208ENST00000519481 FAM20BO75063 409 aa9.08□□□□□ -0.96
PVT1-208ENST00000519481 CRYBA1P05813 215 aa9.08□□□□□ -0.96
PVT1-208ENST00000519481 HSD17B1P14061 328 aa9.08□□□□□ -0.96
PVT1-208ENST00000519481 RRM2P31350 389 aa9.08□□□□□ -0.96
PVT1-208ENST00000519481 GSSP48637 474 aa9.08□□□□□ -0.96
PVT1-208ENST00000519481 PAX2Q02962 417 aa9.08□□□□□ -0.96
PVT1-208ENST00000519481 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.08□□□□□ -0.96
PVT1-208ENST00000519481 MZT1Q08AG7 82 aa9.08□□□□□ -0.96
PVT1-208ENST00000519481 TAF13Q15543 124 aa9.08□□□□□ -0.96
PVT1-208ENST00000519481 SLC9A3R2Q15599 337 aa9.08□□□□□ -0.96
PVT1-208ENST00000519481 RSPO1Q2MKA7 263 aaPredicted RBP9.08□□□□□ -0.96
PVT1-208ENST00000519481 KRTAP27-1Q3LI81 207 aa9.08□□□□□ -0.96
PVT1-208ENST00000519481 SAMD4BQ5PRF9 694 aaKnown RBP9.08□□□□□ -0.96
PVT1-208ENST00000519481 PRR31Q5SQ13 230 aa9.08□□□□□ -0.96
PVT1-208ENST00000519481 FAM201AQ5SY85 155 aa9.08□□□□□ -0.96
PVT1-208ENST00000519481 SLC35F1Q5T1Q4 408 aa9.08□□□□□ -0.96
PVT1-208ENST00000519481 WDR25Q64LD2 544 aaPredicted RBP9.08□□□□□ -0.96
PVT1-208ENST00000519481 C16orf87Q6PH81 154 aa9.08□□□□□ -0.96
PVT1-208ENST00000519481 LINC00471Q8N535 108 aa9.08□□□□□ -0.96
PVT1-208ENST00000519481 PROKR2Q8NFJ6 384 aa9.08□□□□□ -0.96
PVT1-208ENST00000519481 OR2T4Q8NH00 348 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms