RNA–Protein interactions for RNA: ENST00000518885.1

CNOT7-204, Transcript of CCR4-NOT transcription complex subunit 7, human

TSL 3

Gene CNOT7, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT7-204	ENST00000518885	TMEM106B	Q9NUM4	274 aa		20.48	■□□□□ 0.87
CNOT7-204	ENST00000518885	TMEM100	Q9NV29	134 aa		20.48	■□□□□ 0.87
CNOT7-204	ENST00000518885	CACNG2	Q9Y698	323 aa		20.48	■□□□□ 0.87
CNOT7-204	ENST00000518885	ANK3	Q12955	4377 aa	Known RBP	20.48	■□□□□ 0.87
CNOT7-204	ENST00000518885	ZNF878	C9JN71	531 aa		20.47	■□□□□ 0.87
CNOT7-204	ENST00000518885	PRR23D1	E9PI22	279 aa	Predicted RBP	20.47	■□□□□ 0.87
CNOT7-204	ENST00000518885	ZNF593	O00488	134 aa	Predicted RBP	20.47	■□□□□ 0.87
CNOT7-204	ENST00000518885	GYPB	P06028	91 aa		20.47	■□□□□ 0.87
CNOT7-204	ENST00000518885	PRR23D2	P0DMB1	279 aa	Predicted RBP	20.47	■□□□□ 0.87
CNOT7-204	ENST00000518885	RAD23A	P54725	363 aa		20.47	■□□□□ 0.87
CNOT7-204	ENST00000518885	GRB2	P62993	217 aa	Known RBP	20.47	■□□□□ 0.87
CNOT7-204	ENST00000518885	PCK2	Q16822	640 aa		20.47	■□□□□ 0.87
CNOT7-204	ENST00000518885		Q6ZR03	302 aa		20.47	■□□□□ 0.87
CNOT7-204	ENST00000518885	SPIC	Q8N5J4	248 aa		20.47	■□□□□ 0.87
CNOT7-204	ENST00000518885	ST7L	Q8TDW4	575 aa		20.47	■□□□□ 0.87
CNOT7-204	ENST00000518885	SPRYD4	Q8WW59	207 aa	Predicted RBP	20.47	■□□□□ 0.87
CNOT7-204	ENST00000518885	SLAMF6	Q96DU3	332 aa		20.47	■□□□□ 0.87
CNOT7-204	ENST00000518885	OR2V2	Q96R30	315 aa		20.47	■□□□□ 0.87
CNOT7-204	ENST00000518885	INTS14	Q96SY0	518 aa		20.47	■□□□□ 0.87
CNOT7-204	ENST00000518885	SLC22A4	Q9H015	551 aa		20.47	■□□□□ 0.87
CNOT7-204	ENST00000518885	TOR3A	Q9H497	397 aa		20.47	■□□□□ 0.87
CNOT7-204	ENST00000518885	OPA3	Q9H6K4	179 aa		20.47	■□□□□ 0.87
CNOT7-204	ENST00000518885	WDR76	Q9H967	626 aa		20.47	■□□□□ 0.87
CNOT7-204	ENST00000518885	HIF1AN	Q9NWT6	349 aa		20.47	■□□□□ 0.87
CNOT7-204	ENST00000518885	NPTN	Q9Y639	398 aa		20.47	■□□□□ 0.87
CNOT7-204	ENST00000518885	LRRC30	A6NM36	301 aa		20.46	■□□□□ 0.87
CNOT7-204	ENST00000518885	WNT9B	O14905	357 aa		20.46	■□□□□ 0.87
CNOT7-204	ENST00000518885	DBP	Q10586	325 aa	Predicted RBP	20.46	■□□□□ 0.87
CNOT7-204	ENST00000518885	GINS1	Q14691	196 aa		20.46	■□□□□ 0.87
CNOT7-204	ENST00000518885	RSPO1	Q2MKA7	263 aa	Predicted RBP	20.46	■□□□□ 0.87
CNOT7-204	ENST00000518885	SHQ1	Q6PI26	577 aa	Known RBP	20.46	■□□□□ 0.87
CNOT7-204	ENST00000518885	SHF	Q7M4L6	423 aa		20.46	■□□□□ 0.87
CNOT7-204	ENST00000518885	IQCF1	Q8N6M8	205 aa		20.46	■□□□□ 0.87
CNOT7-204	ENST00000518885	ZNF283	Q8N7M2	679 aa		20.46	■□□□□ 0.87
CNOT7-204	ENST00000518885	ZNF511	Q8NB15	262 aa		20.46	■□□□□ 0.87
CNOT7-204	ENST00000518885	KCNJ15	Q99712	375 aa		20.46	■□□□□ 0.87
CNOT7-204	ENST00000518885	SLC30A2	Q9BRI3	323 aa		20.46	■□□□□ 0.87
CNOT7-204	ENST00000518885	CENPM	Q9NSP4	180 aa		20.46	■□□□□ 0.87
CNOT7-204	ENST00000518885	PCDHB10	Q9UN67	800 aa		20.46	■□□□□ 0.87
CNOT7-204	ENST00000518885	FAM157A	C9JC47	383 aa		20.45	■□□□□ 0.86
CNOT7-204	ENST00000518885	GLCE	O94923	617 aa		20.45	■□□□□ 0.86
CNOT7-204	ENST00000518885	IGHV2-5	P01817	119 aa		20.45	■□□□□ 0.86
CNOT7-204	ENST00000518885	HSD11B1	P28845	292 aa		20.45	■□□□□ 0.86
CNOT7-204	ENST00000518885	GSTT1	P30711	240 aa		20.45	■□□□□ 0.86
CNOT7-204	ENST00000518885	GK2	Q14410	553 aa	Predicted RBP	20.45	■□□□□ 0.86
CNOT7-204	ENST00000518885	TMEM179B	Q7Z7N9	219 aa		20.45	■□□□□ 0.86
CNOT7-204	ENST00000518885	KLHL36	Q8N4N3	616 aa		20.45	■□□□□ 0.86
CNOT7-204	ENST00000518885	BHLHE23	Q8NDY6	225 aa		20.45	■□□□□ 0.86
CNOT7-204	ENST00000518885	ITLN1	Q8WWA0	313 aa		20.45	■□□□□ 0.86
CNOT7-204	ENST00000518885	SLCO4A1	Q96BD0	722 aa		20.45	■□□□□ 0.86
CNOT7-204	ENST00000518885	PRRG3	Q9BZD7	231 aa		20.45	■□□□□ 0.86
CNOT7-204	ENST00000518885	LPAR2	Q9HBW0	351 aa		20.45	■□□□□ 0.86
CNOT7-204	ENST00000518885	PRODH	O43272	600 aa		20.44	■□□□□ 0.86
CNOT7-204	ENST00000518885	OTX1	P32242	354 aa	Predicted RBP	20.44	■□□□□ 0.86
CNOT7-204	ENST00000518885	RPS27	P42677	84 aa	Known RBP	20.44	■□□□□ 0.86
CNOT7-204	ENST00000518885	ERF	P50548	548 aa		20.44	■□□□□ 0.86
CNOT7-204	ENST00000518885	EIF2B1	Q14232	305 aa	Known RBP	20.44	■□□□□ 0.86
CNOT7-204	ENST00000518885	IL17REL	Q6ZVW7	336 aa		20.44	■□□□□ 0.86
CNOT7-204	ENST00000518885	RHOU	Q7L0Q8	258 aa		20.44	■□□□□ 0.86
CNOT7-204	ENST00000518885	ERI1	Q8IV48	349 aa	Known RBP	20.44	■□□□□ 0.86
CNOT7-204	ENST00000518885	C1orf87	Q8N0U7	546 aa		20.44	■□□□□ 0.86
CNOT7-204	ENST00000518885	OR6N2	Q8NGY6	317 aa		20.44	■□□□□ 0.86
CNOT7-204	ENST00000518885	ZNRF4	Q8WWF5	429 aa		20.44	■□□□□ 0.86
CNOT7-204	ENST00000518885	TMEM158	Q8WZ71	300 aa		20.44	■□□□□ 0.86
CNOT7-204	ENST00000518885	PAPOLB	Q9NRJ5	636 aa	Known RBP	20.44	■□□□□ 0.86
CNOT7-204	ENST00000518885		A0A0G2JMP0	313 aa		20.43	■□□□□ 0.86
CNOT7-204	ENST00000518885		A0A0X1KG70	313 aa		20.43	■□□□□ 0.86
CNOT7-204	ENST00000518885	FAM183A	A6NL82	134 aa		20.43	■□□□□ 0.86
CNOT7-204	ENST00000518885	CLU	P10909	449 aa		20.43	■□□□□ 0.86
CNOT7-204	ENST00000518885	FCGR1A	P12314	374 aa		20.43	■□□□□ 0.86
CNOT7-204	ENST00000518885	GATA3	P23771	443 aa		20.43	■□□□□ 0.86
CNOT7-204	ENST00000518885	TMEM155	Q4W5P6	130 aa		20.43	■□□□□ 0.86
CNOT7-204	ENST00000518885	C1orf146	Q5VVC0	180 aa		20.43	■□□□□ 0.86
CNOT7-204	ENST00000518885	LYPD4	Q6UWN0	246 aa		20.43	■□□□□ 0.86
CNOT7-204	ENST00000518885	MUC20	Q8N307	709 aa	Predicted RBP	20.43	■□□□□ 0.86
CNOT7-204	ENST00000518885	CELF2-AS1	Q8N7Q2	184 aa		20.43	■□□□□ 0.86
CNOT7-204	ENST00000518885	OR4M2	Q8NGB6	313 aa		20.43	■□□□□ 0.86
CNOT7-204	ENST00000518885	OR10AD1	Q8NGE0	317 aa		20.43	■□□□□ 0.86
CNOT7-204	ENST00000518885	OR10S1	Q8NGN2	331 aa		20.43	■□□□□ 0.86
CNOT7-204	ENST00000518885	MEGF10	Q96KG7	1140 aa		20.43	■□□□□ 0.86
CNOT7-204	ENST00000518885	OR51V1	Q9H2C8	321 aa		20.43	■□□□□ 0.86
CNOT7-204	ENST00000518885	UBAP1	Q9NZ09	502 aa		20.43	■□□□□ 0.86
CNOT7-204	ENST00000518885	MALRD1	Q5VYJ5	2156 aa		20.43	■□□□□ 0.86
CNOT7-204	ENST00000518885	GGT3P	A6NGU5	568 aa		20.42	■□□□□ 0.86
CNOT7-204	ENST00000518885	XRCC2	O43543	280 aa		20.42	■□□□□ 0.86
CNOT7-204	ENST00000518885	CIB2	O75838	187 aa		20.42	■□□□□ 0.86
CNOT7-204	ENST00000518885	PNP	P00491	289 aa		20.42	■□□□□ 0.86
CNOT7-204	ENST00000518885	SBK2	P0C263	348 aa		20.42	■□□□□ 0.86
CNOT7-204	ENST00000518885	IRF2	P14316	349 aa		20.42	■□□□□ 0.86
CNOT7-204	ENST00000518885	CPT2	P23786	658 aa		20.42	■□□□□ 0.86
CNOT7-204	ENST00000518885	BTG1	P62324	171 aa		20.42	■□□□□ 0.86
CNOT7-204	ENST00000518885	CDK5	Q00535	292 aa		20.42	■□□□□ 0.86
CNOT7-204	ENST00000518885	MZT1	Q08AG7	82 aa		20.42	■□□□□ 0.86
CNOT7-204	ENST00000518885	SLC35D3	Q5M8T2	416 aa		20.42	■□□□□ 0.86
CNOT7-204	ENST00000518885	LINC01590	Q5TEZ4	76 aa		20.42	■□□□□ 0.86
CNOT7-204	ENST00000518885	ZNF454	Q8N9F8	522 aa		20.42	■□□□□ 0.86
CNOT7-204	ENST00000518885	ERGIC1	Q969X5	290 aa		20.42	■□□□□ 0.86
CNOT7-204	ENST00000518885	MARCH7	Q9H992	704 aa		20.42	■□□□□ 0.86
CNOT7-204	ENST00000518885	SLC25A19	Q9HC21	320 aa		20.42	■□□□□ 0.86
CNOT7-204	ENST00000518885	GCM1	Q9NP62	436 aa		20.42	■□□□□ 0.86

Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms