RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 RAB1CQ92928 201 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 ZNF524Q96C55 264 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 DDIT4LQ96D03 193 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 TECTBQ96PL2 329 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 MCHR1Q99705 422 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 TMEM246Q9BRR3 403 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 UCK2Q9BZX2 261 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 OR11A1Q9GZK7 315 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 EXOSC3Q9NQT5 275 aaKnown RBP2.42□□□□□ -2.02
SKP1-204ENST00000517691 PAQR5Q9NXK6 330 aaPredicted RBP2.42□□□□□ -2.02
SKP1-204ENST00000517691 MTCH1Q9NZJ7 389 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 TMEM181Q9P2C4 612 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 PSORS1C1Q9UIG5 152 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 ATPIF1Q9UII2 106 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 MCTS1Q9ULC4 181 aaKnown RBP2.42□□□□□ -2.02
SKP1-204ENST00000517691 RNF6Q9Y252 685 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 TMED7Q9Y3B3 224 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 PCDHGB1Q9Y5G3 927 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 FAM215AQ9Y5M1 114 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 SPIN1Q9Y657 262 aaPredicted RBP2.42□□□□□ -2.02
SKP1-204ENST00000517691 DOCK10Q96BY6 2186 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 COL6A6A6NMZ7 2263 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 HELZ2Q9BYK8 2649 aaKnown RBP2.42□□□□□ -2.02
SKP1-204ENST00000517691 RP1L1Q8IWN7 2480 aaPredicted RBP2.41□□□□□ -2.02
SKP1-204ENST00000517691 UTP20O75691 2785 aaKnown RBP2.41□□□□□ -2.02
SKP1-204ENST00000517691 TRAV26-1A0A087WT03 109 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 IGHV3-15A0A0B4J1V0 119 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 A0A1B0GWA3 101 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 TMEM72A0PK05 275 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 NKX2-6A6NCS4 301 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 A8MVM7 634 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 FAM157AC9JC47 383 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 PRSS44E7EML9 344 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 PRYO14603 147 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 GYG2O15488 501 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 ATP5HO75947 161 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 PDE5AO76074 875 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 RCBTB2O95199 551 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 CLDN14O95500 239 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 SERPINA1P01009 418 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 APOA1P02647 267 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 ADH4P08319 380 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 RNF224P0DH78 156 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 T-ENOLP0DO92 83 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 SRD5A1P18405 259 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 CBLP22681 906 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 FKBP2P26885 142 aaKnown RBP2.41□□□□□ -2.02
SKP1-204ENST00000517691 HTR2AP28223 471 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 ELK4P28324 431 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 HTR1EP28566 365 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 GTF2E2P29084 291 aaKnown RBP2.41□□□□□ -2.02
SKP1-204ENST00000517691 SHC1P29353 583 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 IFNA8P32881 189 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 TIMP3P35625 211 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 YAP1P46937 504 aaKnown RBP2.41□□□□□ -2.02
SKP1-204ENST00000517691 OR1E2P47887 323 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 CDH12P55289 794 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 TAS2R41P59536 307 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 SELENOWP63302 87 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 CSNK2A1P68400 391 aaPredicted RBP2.41□□□□□ -2.02
SKP1-204ENST00000517691 DLK1P80370 383 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 MYBPHQ13203 477 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 MELKQ14680 651 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 HLXQ14774 488 aaPredicted RBP2.41□□□□□ -2.02
SKP1-204ENST00000517691 OR7A5Q15622 319 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 EXOC3L2Q2M3D2 409 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 SYT14P1Q58G82 188 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 SLC25A53Q5H9E4 307 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 ALG10BQ5I7T1 473 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 CEP78Q5JTW2 689 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 ENTPD8Q5MY95 495 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 SFRP4Q6FHJ7 346 aaPredicted RBP2.41□□□□□ -2.02
SKP1-204ENST00000517691 OR2A2Q6IF42 318 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 FAM166AQ6J272 317 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 C8orf82Q6P1X6 216 aaPredicted RBP2.41□□□□□ -2.02
SKP1-204ENST00000517691 ULK3Q6PHR2 472 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 XKRXQ6PP77 449 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 DEF8Q6ZN54 512 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 FCRLAQ7L513 359 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 LHFPL4Q7Z7J7 247 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 CCDC190Q86UF4 302 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 CARM1Q86X55 608 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 RBM45Q8IUH3 476 aaKnown RBP2.41□□□□□ -2.02
SKP1-204ENST00000517691 PGAM4Q8N0Y7 254 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 TMEM123Q8N131 208 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 ZNF808Q8N4W9 903 aaPredicted RBP2.41□□□□□ -2.02
SKP1-204ENST00000517691 LRRC17Q8N6Y2 441 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 ZNF611Q8N823 705 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 GPR32P1Q8NGA4 272 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 OR6T1Q8NGN1 323 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 KCNG3Q8TAE7 436 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 LRRC20Q8TCA0 184 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 PHF10Q8WUB8 498 aaKnown RBP2.41□□□□□ -2.02
SKP1-204ENST00000517691 CHPT1Q8WUD6 406 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 SLC25A43Q8WUT9 341 aaPredicted RBP2.41□□□□□ -2.02
SKP1-204ENST00000517691 ITLN2Q8WWU7 325 aaPredicted RBP2.41□□□□□ -2.02
SKP1-204ENST00000517691 CACNG8Q8WXS5 425 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 AKAP1Q92667 903 aaKnown RBP eCLIP2.41□□□□□ -2.02
SKP1-204ENST00000517691 GGHQ92820 318 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 TNFRSF14Q92956 283 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms