RNA–Protein interactions for RNA: ENST00000516826.1

RNU2-56P-201, Transcript of RNA, U2 small nuclear 56, pseudogene, humanhuman

BASIC

Gene RNU2-56P, Length 190 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-56P-201ENST00000516826 TRMT112Q9UI30 125 aaKnown RBP0.73□□□□□ -2.29
RNU2-56P-201ENST00000516826 TRAV19A0A0A6YYK7 116 aa0.72□□□□□ -2.29
RNU2-56P-201ENST00000516826 GOLGA8OA6NCC3 632 aa0.72□□□□□ -2.29
RNU2-56P-201ENST00000516826 ZNF98A6NK75 572 aa0.72□□□□□ -2.29
RNU2-56P-201ENST00000516826 OR2AG2A6NM03 316 aa0.72□□□□□ -2.29
RNU2-56P-201ENST00000516826 GABRR3A8MPY1 467 aa0.72□□□□□ -2.29
RNU2-56P-201ENST00000516826 GOLGA8NF8WBI6 632 aa0.72□□□□□ -2.29
RNU2-56P-201ENST00000516826 CYB5R3P00387 301 aaPredicted RBP0.72□□□□□ -2.29
RNU2-56P-201ENST00000516826 HPRT1P00492 218 aa0.72□□□□□ -2.29
RNU2-56P-201ENST00000516826 OR1E1P30953 314 aa0.72□□□□□ -2.29
RNU2-56P-201ENST00000516826 CD70P32970 193 aa0.72□□□□□ -2.29
RNU2-56P-201ENST00000516826 PFN2P35080 140 aa0.72□□□□□ -2.29
RNU2-56P-201ENST00000516826 RBM34P42696 430 aaKnown RBP0.72□□□□□ -2.29
RNU2-56P-201ENST00000516826 GDI2P50395 445 aaKnown RBP0.72□□□□□ -2.29
RNU2-56P-201ENST00000516826 KRTAP12-3P60328 96 aa0.72□□□□□ -2.29
RNU2-56P-201ENST00000516826 RPS23P62266 143 aaKnown RBP0.72□□□□□ -2.29
RNU2-56P-201ENST00000516826 FLI1Q01543 452 aaPredicted RBP0.72□□□□□ -2.29
RNU2-56P-201ENST00000516826 FUT5Q11128 374 aa0.72□□□□□ -2.29
RNU2-56P-201ENST00000516826 IL15RAQ13261 267 aa0.72□□□□□ -2.29
RNU2-56P-201ENST00000516826 MAD2L1BPQ15013 274 aaPredicted RBP0.72□□□□□ -2.29
RNU2-56P-201ENST00000516826 TAF9Q16594 264 aa0.72□□□□□ -2.29
RNU2-56P-201ENST00000516826 TPTE2P1Q5T6R2 138 aa0.72□□□□□ -2.29
RNU2-56P-201ENST00000516826 ARMC12Q5T9G4 340 aa0.72□□□□□ -2.29
RNU2-56P-201ENST00000516826 CASP12Q6UXS9 341 aa0.72□□□□□ -2.29
RNU2-56P-201ENST00000516826 BRD3OSQ6XYD6 125 aa0.72□□□□□ -2.29
RNU2-56P-201ENST00000516826 CMC1Q7Z7K0 106 aa0.72□□□□□ -2.29
RNU2-56P-201ENST00000516826 NT5DC3Q86UY8 548 aa0.72□□□□□ -2.29
RNU2-56P-201ENST00000516826 CDH26Q8IXH8 852 aa0.72□□□□□ -2.29
RNU2-56P-201ENST00000516826 FAM71AQ8IYT1 594 aa0.72□□□□□ -2.29
RNU2-56P-201ENST00000516826 CMTM1Q8IZ96 169 aa0.72□□□□□ -2.29
RNU2-56P-201ENST00000516826 C19orf18Q8NEA5 215 aa0.72□□□□□ -2.29
RNU2-56P-201ENST00000516826 OR10W1Q8NGF6 305 aa0.72□□□□□ -2.29
RNU2-56P-201ENST00000516826 OR5M1Q8NGP8 315 aa0.72□□□□□ -2.29
RNU2-56P-201ENST00000516826 OR6Q1Q8NGQ2 317 aa0.72□□□□□ -2.29
RNU2-56P-201ENST00000516826 OR1L1Q8NH94 360 aa0.72□□□□□ -2.29
RNU2-56P-201ENST00000516826 NRGNQ92686 78 aa0.72□□□□□ -2.29
RNU2-56P-201ENST00000516826 C8orf44Q96CB5 159 aa0.72□□□□□ -2.29
RNU2-56P-201ENST00000516826 ZBED3Q96IU2 234 aaPredicted RBP0.72□□□□□ -2.29
RNU2-56P-201ENST00000516826 KCNS1Q96KK3 526 aa0.72□□□□□ -2.29
RNU2-56P-201ENST00000516826 ZFP3Q96NJ6 502 aa0.72□□□□□ -2.29
RNU2-56P-201ENST00000516826 CENPKQ9BS16 269 aa0.72□□□□□ -2.29
RNU2-56P-201ENST00000516826 TMEM38AQ9H6F2 299 aa0.72□□□□□ -2.29
RNU2-56P-201ENST00000516826 EDA2RQ9HAV5 297 aa0.72□□□□□ -2.29
RNU2-56P-201ENST00000516826 TMEM27Q9HBJ8 222 aa0.72□□□□□ -2.29
RNU2-56P-201ENST00000516826 CLN6Q9NWW5 311 aa0.72□□□□□ -2.29
RNU2-56P-201ENST00000516826 C21orf62Q9NYP8 219 aa0.72□□□□□ -2.29
RNU2-56P-201ENST00000516826 DHCR7Q9UBM7 475 aaKnown RBP0.72□□□□□ -2.29
RNU2-56P-201ENST00000516826 CARHSP1Q9Y2V2 147 aaKnown RBP0.72□□□□□ -2.29
RNU2-56P-201ENST00000516826 COL5A1P20908 1838 aaPredicted RBP0.72□□□□□ -2.29
RNU2-56P-201ENST00000516826 GPR179Q6PRD1 2367 aa0.71□□□□□ -2.3
RNU2-56P-201ENST00000516826 LTBP4Q8N2S1 1624 aa0.71□□□□□ -2.3
RNU2-56P-201ENST00000516826 OTOGLQ3ZCN5 2332 aa0.71□□□□□ -2.3
RNU2-56P-201ENST00000516826 PCDH11XQ9BZA7 1347 aa0.71□□□□□ -2.3
RNU2-56P-201ENST00000516826 IGKV1-27A0A075B6S5 117 aa0.71□□□□□ -2.3
RNU2-56P-201ENST00000516826 IGKV3D-11A0A0A0MRZ8 115 aa0.71□□□□□ -2.3
RNU2-56P-201ENST00000516826 A0A1B0GW55 424 aa0.71□□□□□ -2.3
RNU2-56P-201ENST00000516826 SMCO3A2RU48 225 aa0.71□□□□□ -2.3
RNU2-56P-201ENST00000516826 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP0.71□□□□□ -2.3
RNU2-56P-201ENST00000516826 H7C0C1 242 aa0.71□□□□□ -2.3
RNU2-56P-201ENST00000516826 H7C1H1 209 aa0.71□□□□□ -2.3
RNU2-56P-201ENST00000516826 M0R3G1 203 aa0.71□□□□□ -2.3
RNU2-56P-201ENST00000516826 ERI3O43414 337 aaKnown RBP0.71□□□□□ -2.3
RNU2-56P-201ENST00000516826 RNF13O43567 381 aa0.71□□□□□ -2.3
RNU2-56P-201ENST00000516826 CHMP2AO43633 222 aa0.71□□□□□ -2.3
RNU2-56P-201ENST00000516826 PLIN3O60664 434 aa0.71□□□□□ -2.3
RNU2-56P-201ENST00000516826 RAD1O60671 282 aa0.71□□□□□ -2.3
RNU2-56P-201ENST00000516826 EIF1BO60739 113 aaKnown RBP0.71□□□□□ -2.3
RNU2-56P-201ENST00000516826 OXTP01178 125 aa0.71□□□□□ -2.3
RNU2-56P-201ENST00000516826 HBE1P02100 147 aa0.71□□□□□ -2.3
RNU2-56P-201ENST00000516826 FTH1P02794 183 aa0.71□□□□□ -2.3
RNU2-56P-201ENST00000516826 TACSTD2P09758 323 aa0.71□□□□□ -2.3
RNU2-56P-201ENST00000516826 PABPC4LP0CB38 370 aaKnown RBP0.71□□□□□ -2.3
RNU2-56P-201ENST00000516826 DUX4L2P0CJ85 424 aa0.71□□□□□ -2.3
RNU2-56P-201ENST00000516826 DUX4L3P0CJ86 424 aa0.71□□□□□ -2.3
RNU2-56P-201ENST00000516826 DUX4L5P0CJ88 424 aa0.71□□□□□ -2.3
RNU2-56P-201ENST00000516826 DUX4L6P0CJ89 424 aa0.71□□□□□ -2.3
RNU2-56P-201ENST00000516826 DUX4L7P0CJ90 424 aa0.71□□□□□ -2.3
RNU2-56P-201ENST00000516826 PGA4P0DJD7 388 aa0.71□□□□□ -2.3
RNU2-56P-201ENST00000516826 PGA3P0DJD8 388 aa0.71□□□□□ -2.3
RNU2-56P-201ENST00000516826 PGA5P0DJD9 388 aa0.71□□□□□ -2.3
RNU2-56P-201ENST00000516826 INAFM2P0DMQ5 153 aa0.71□□□□□ -2.3
RNU2-56P-201ENST00000516826 CD37P11049 281 aa0.71□□□□□ -2.3
RNU2-56P-201ENST00000516826 CTRB1P17538 263 aa0.71□□□□□ -2.3
RNU2-56P-201ENST00000516826 NTF3P20783 257 aa0.71□□□□□ -2.3
RNU2-56P-201ENST00000516826 USF1P22415 310 aaPredicted RBP0.71□□□□□ -2.3
RNU2-56P-201ENST00000516826 HTR1DP28221 377 aa0.71□□□□□ -2.3
RNU2-56P-201ENST00000516826 PBLDP30039 288 aaPredicted RBP0.71□□□□□ -2.3
RNU2-56P-201ENST00000516826 BMI1P35226 326 aa0.71□□□□□ -2.3
RNU2-56P-201ENST00000516826 POLR2IP36954 125 aaKnown RBP0.71□□□□□ -2.3
RNU2-56P-201ENST00000516826 EIF1P41567 113 aaKnown RBP0.71□□□□□ -2.3
RNU2-56P-201ENST00000516826 ATP5OP48047 213 aa0.71□□□□□ -2.3
RNU2-56P-201ENST00000516826 IDH2P48735 452 aaKnown RBP0.71□□□□□ -2.3
RNU2-56P-201ENST00000516826 FABP6P51161 128 aa0.71□□□□□ -2.3
RNU2-56P-201ENST00000516826 ELF3P78545 371 aaPredicted RBP0.71□□□□□ -2.3
RNU2-56P-201ENST00000516826 LIPEQ05469 1076 aa0.71□□□□□ -2.3
RNU2-56P-201ENST00000516826 ZNF235Q14590 738 aa0.71□□□□□ -2.3
RNU2-56P-201ENST00000516826 RBMY1FQ15415 496 aaKnown RBP0.71□□□□□ -2.3
RNU2-56P-201ENST00000516826 PSMD5Q16401 504 aa0.71□□□□□ -2.3
RNU2-56P-201ENST00000516826 MRPL23Q16540 153 aaKnown RBP0.71□□□□□ -2.3
RNU2-56P-201ENST00000516826 YIF1BQ5BJH7 314 aa0.71□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms