RNA–Protein interactions for RNA: ENST00000516564.1

RNU6-358P-201, Transcript of RNA, U6 small nuclear 358, pseudogene, humanhuman

BASIC

Gene RNU6-358P, Length 75 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-358P-201ENST00000516564 MRPS22P82650 360 aaKnown RBP0.44□□□□□ -2.34
RNU6-358P-201ENST00000516564 PRB3Q04118 309 aaPredicted RBP0.44□□□□□ -2.34
RNU6-358P-201ENST00000516564 ILKQ13418 452 aa0.44□□□□□ -2.34
RNU6-358P-201ENST00000516564 PDZD11Q5EBL8 140 aa0.44□□□□□ -2.34
RNU6-358P-201ENST00000516564 OR1L6Q8NGR2 347 aa0.44□□□□□ -2.34
RNU6-358P-201ENST00000516564 OR1L4Q8NGR5 311 aa0.44□□□□□ -2.34
RNU6-358P-201ENST00000516564 OR2A1Q8NGT9 310 aa0.44□□□□□ -2.34
RNU6-358P-201ENST00000516564 RLN3Q8WXF3 142 aa0.44□□□□□ -2.34
RNU6-358P-201ENST00000516564 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP0.44□□□□□ -2.34
RNU6-358P-201ENST00000516564 OTUB2Q96DC9 234 aa0.44□□□□□ -2.34
RNU6-358P-201ENST00000516564 MICU1Q9BPX6 476 aa0.44□□□□□ -2.34
RNU6-358P-201ENST00000516564 PDP1Q9P0J1 537 aaPredicted RBP0.44□□□□□ -2.34
RNU6-358P-201ENST00000516564 SSH2Q76I76 1423 aa0.44□□□□□ -2.34
RNU6-358P-201ENST00000516564 DOCK10Q96BY6 2186 aa0.43□□□□□ -2.34
RNU6-358P-201ENST00000516564 DYSFO75923 2080 aa0.43□□□□□ -2.34
RNU6-358P-201ENST00000516564 IGKV1D-43A0A0B4J1Z2 117 aa0.43□□□□□ -2.34
RNU6-358P-201ENST00000516564 GATBO75879 557 aaKnown RBP0.43□□□□□ -2.34
RNU6-358P-201ENST00000516564 CLPXO76031 633 aa0.43□□□□□ -2.34
RNU6-358P-201ENST00000516564 IFNB1P01574 187 aa0.43□□□□□ -2.34
RNU6-358P-201ENST00000516564 KRT8P05787 483 aa0.43□□□□□ -2.34
RNU6-358P-201ENST00000516564 THRAP10827 490 aa0.43□□□□□ -2.34
RNU6-358P-201ENST00000516564 DBTP11182 482 aaKnown RBP0.43□□□□□ -2.34
RNU6-358P-201ENST00000516564 HTD2P86397 168 aa0.43□□□□□ -2.34
RNU6-358P-201ENST00000516564 CCDC92Q53HC0 331 aaPredicted RBP0.43□□□□□ -2.34
RNU6-358P-201ENST00000516564 MS4A15Q8N5U1 240 aa0.43□□□□□ -2.34
RNU6-358P-201ENST00000516564 CHST4Q8NCG5 386 aa0.43□□□□□ -2.34
RNU6-358P-201ENST00000516564 GPR26Q8NDV2 337 aa0.43□□□□□ -2.34
RNU6-358P-201ENST00000516564 OR2T3Q8NH03 318 aa0.43□□□□□ -2.34
RNU6-358P-201ENST00000516564 GHSRQ92847 366 aa0.43□□□□□ -2.34
RNU6-358P-201ENST00000516564 PDCD1LG2Q9BQ51 273 aa0.43□□□□□ -2.34
RNU6-358P-201ENST00000516564 RAB33BQ9H082 229 aa0.43□□□□□ -2.34
RNU6-358P-201ENST00000516564 FBXO8Q9NRD0 319 aa0.43□□□□□ -2.34
RNU6-358P-201ENST00000516564 LSM7Q9UK45 103 aaKnown RBP0.43□□□□□ -2.34
RNU6-358P-201ENST00000516564 SPATA31E1Q6ZUB1 1445 aa0.43□□□□□ -2.34
RNU6-358P-201ENST00000516564 MED13Q9UHV7 2174 aa0.43□□□□□ -2.34
RNU6-358P-201ENST00000516564 COL4A1P02462 1669 aa0.43□□□□□ -2.34
RNU6-358P-201ENST00000516564 STRCP1A6NGW2 1772 aa0.42□□□□□ -2.34
RNU6-358P-201ENST00000516564 A0A1W2PNM2 257 aa0.42□□□□□ -2.34
RNU6-358P-201ENST00000516564 TIMM8AO60220 97 aaPredicted RBP0.42□□□□□ -2.34
RNU6-358P-201ENST00000516564 TMEM50AO95807 157 aa0.42□□□□□ -2.34
RNU6-358P-201ENST00000516564 IGHMP01871 453 aa0.42□□□□□ -2.34
RNU6-358P-201ENST00000516564 MT-ND4P03905 459 aa0.42□□□□□ -2.34
RNU6-358P-201ENST00000516564 SLC35G6P0C7Q6 338 aa0.42□□□□□ -2.34
RNU6-358P-201ENST00000516564 ATP1B2P14415 290 aaPredicted RBP0.42□□□□□ -2.34
RNU6-358P-201ENST00000516564 PRKACBP22694 351 aa0.42□□□□□ -2.34
RNU6-358P-201ENST00000516564 U2AF2P26368 475 aaKnown RBP eCLIP0.42□□□□□ -2.34
RNU6-358P-201ENST00000516564 OTX1P32242 354 aaPredicted RBP0.42□□□□□ -2.34
RNU6-358P-201ENST00000516564 IFNA8P32881 189 aa0.42□□□□□ -2.34
RNU6-358P-201ENST00000516564 LDLRAD2Q5SZI1 272 aa0.42□□□□□ -2.34
RNU6-358P-201ENST00000516564 LIN9Q5TKA1 542 aa0.42□□□□□ -2.34
RNU6-358P-201ENST00000516564 MDP1Q86V88 176 aa0.42□□□□□ -2.34
RNU6-358P-201ENST00000516564 SDR9C7Q8NEX9 313 aa0.42□□□□□ -2.34
RNU6-358P-201ENST00000516564 OR52N1Q8NH53 320 aa0.42□□□□□ -2.34
RNU6-358P-201ENST00000516564 OR1L1Q8NH94 360 aa0.42□□□□□ -2.34
RNU6-358P-201ENST00000516564 OR5B12Q96R08 314 aa0.42□□□□□ -2.34
RNU6-358P-201ENST00000516564 ZNF442Q9H7R0 627 aa0.42□□□□□ -2.34
RNU6-358P-201ENST00000516564 DYRK4Q9NR20 520 aa0.42□□□□□ -2.34
RNU6-358P-201ENST00000516564 NUP50Q9UKX7 468 aa0.42□□□□□ -2.34
RNU6-358P-201ENST00000516564 ODF2LQ9ULJ1 636 aa0.42□□□□□ -2.34
RNU6-358P-201ENST00000516564 LRRC42Q9Y546 428 aa0.42□□□□□ -2.34
RNU6-358P-201ENST00000516564 IGKV1-27A0A075B6S5 117 aa0.41□□□□□ -2.34
RNU6-358P-201ENST00000516564 IGKV2-29A2NJV5 120 aaPredicted RBP0.41□□□□□ -2.34
RNU6-358P-201ENST00000516564 SCO1O75880 301 aa0.41□□□□□ -2.34
RNU6-358P-201ENST00000516564 NELFEP18615 380 aaKnown RBP0.41□□□□□ -2.34
RNU6-358P-201ENST00000516564 SSR1P43307 286 aaKnown RBP0.41□□□□□ -2.34
RNU6-358P-201ENST00000516564 DGCR6Q14129 220 aa0.41□□□□□ -2.34
RNU6-358P-201ENST00000516564 GK3PQ14409 553 aa0.41□□□□□ -2.34
RNU6-358P-201ENST00000516564 ZNF726P1Q15940 193 aa0.41□□□□□ -2.34
RNU6-358P-201ENST00000516564 EXOC3L2Q2M3D2 409 aa0.41□□□□□ -2.34
RNU6-358P-201ENST00000516564 EFL1Q7Z2Z2 1120 aaKnown RBP0.41□□□□□ -2.34
RNU6-358P-201ENST00000516564 ARL10Q8N8L6 244 aa0.41□□□□□ -2.34
RNU6-358P-201ENST00000516564 RNASE11Q8TAA1 199 aaKnown RBP0.41□□□□□ -2.34
RNU6-358P-201ENST00000516564 PLPPR1Q8TBJ4 325 aa0.41□□□□□ -2.34
RNU6-358P-201ENST00000516564 SLC7A13Q8TCU3 470 aa0.41□□□□□ -2.34
RNU6-358P-201ENST00000516564 TMEM230Q96A57 120 aa0.41□□□□□ -2.34
RNU6-358P-201ENST00000516564 TMEM43Q9BTV4 400 aa0.41□□□□□ -2.34
RNU6-358P-201ENST00000516564 VSIRQ9H7M9 311 aa0.41□□□□□ -2.34
RNU6-358P-201ENST00000516564 MED4Q9NPJ6 270 aa0.41□□□□□ -2.34
RNU6-358P-201ENST00000516564 ETNK2Q9NVF9 386 aa0.41□□□□□ -2.34
RNU6-358P-201ENST00000516564 CSDC2Q9Y534 153 aaKnown RBP0.41□□□□□ -2.34
RNU6-358P-201ENST00000516564 CR1P17927 2039 aa0.41□□□□□ -2.34
RNU6-358P-201ENST00000516564 COL6A6A6NMZ7 2263 aa0.4□□□□□ -2.34
RNU6-358P-201ENST00000516564 TRGV4A0A0C4DH28 118 aa0.4□□□□□ -2.35
RNU6-358P-201ENST00000516564 CLRN2A0PK11 232 aa0.4□□□□□ -2.35
RNU6-358P-201ENST00000516564 SNTNA6NMZ2 147 aa0.4□□□□□ -2.35
RNU6-358P-201ENST00000516564 TSPAN12O95859 305 aa0.4□□□□□ -2.35
RNU6-358P-201ENST00000516564 ANGP03950 147 aaKnown RBP0.4□□□□□ -2.35
RNU6-358P-201ENST00000516564 HSPD1P10809 573 aaKnown RBP0.4□□□□□ -2.35
RNU6-358P-201ENST00000516564 ETS2P15036 469 aa0.4□□□□□ -2.35
RNU6-358P-201ENST00000516564 KITLGP21583 273 aa0.4□□□□□ -2.35
RNU6-358P-201ENST00000516564 TMED10P49755 219 aaKnown RBP0.4□□□□□ -2.35
RNU6-358P-201ENST00000516564 FOXA1P55317 472 aa0.4□□□□□ -2.35
RNU6-358P-201ENST00000516564 KCNJ2P63252 427 aa0.4□□□□□ -2.35
RNU6-358P-201ENST00000516564 H2BFWTQ7Z2G1 175 aa0.4□□□□□ -2.35
RNU6-358P-201ENST00000516564 PAGE2Q7Z2X7 111 aa0.4□□□□□ -2.35
RNU6-358P-201ENST00000516564 OR5B3Q8NH48 314 aa0.4□□□□□ -2.35
RNU6-358P-201ENST00000516564 ZNF606Q8WXB4 792 aa0.4□□□□□ -2.35
RNU6-358P-201ENST00000516564 MYOZ1Q9NP98 299 aaPredicted RBP0.4□□□□□ -2.35
RNU6-358P-201ENST00000516564 NT5MQ9NPB1 228 aa0.4□□□□□ -2.35
RNU6-358P-201ENST00000516564 MALRD1Q5VYJ5 2156 aa0.4□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms