RNA–Protein interactions for RNA: ENST00000515516.1

TCOF1-215, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-215ENST00000515516 H0YL77 283 aa11.5□□□□□ -0.57
TCOF1-215ENST00000515516 M0R135 149 aa11.5□□□□□ -0.57
TCOF1-215ENST00000515516 BHLHE40O14503 412 aa11.5□□□□□ -0.57
TCOF1-215ENST00000515516 FMO3P31513 532 aa11.5□□□□□ -0.57
TCOF1-215ENST00000515516 MAGEA2P43356 314 aa11.5□□□□□ -0.57
TCOF1-215ENST00000515516 ACTG1P63261 375 aa11.5□□□□□ -0.57
TCOF1-215ENST00000515516 DBPQ10586 325 aaPredicted RBP11.5□□□□□ -0.57
TCOF1-215ENST00000515516 GK2Q14410 553 aaPredicted RBP11.5□□□□□ -0.57
TCOF1-215ENST00000515516 MICAQ29983 383 aa11.5□□□□□ -0.57
TCOF1-215ENST00000515516 RSPO1Q2MKA7 263 aaPredicted RBP11.5□□□□□ -0.57
TCOF1-215ENST00000515516 OR2T5Q6IEZ7 315 aa11.5□□□□□ -0.57
TCOF1-215ENST00000515516 LCN8Q6JVE9 175 aa11.5□□□□□ -0.57
TCOF1-215ENST00000515516 RBMS3Q6XE24 437 aaKnown RBP11.5□□□□□ -0.57
TCOF1-215ENST00000515516 MOGAT3Q86VF5 341 aa11.5□□□□□ -0.57
TCOF1-215ENST00000515516 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.5□□□□□ -0.57
TCOF1-215ENST00000515516 SLC37A3Q8NCC5 494 aa11.5□□□□□ -0.57
TCOF1-215ENST00000515516 OR2T33Q8NG76 320 aa11.5□□□□□ -0.57
TCOF1-215ENST00000515516 OR11L1Q8NGX0 322 aa11.5□□□□□ -0.57
TCOF1-215ENST00000515516 OR2T29Q8NH02 315 aa11.5□□□□□ -0.57
TCOF1-215ENST00000515516 ZNF420Q8TAQ5 688 aaPredicted RBP11.5□□□□□ -0.57
TCOF1-215ENST00000515516 ZNF799Q96GE5 643 aa11.5□□□□□ -0.57
TCOF1-215ENST00000515516 SIGLEC11Q96RL6 698 aa11.5□□□□□ -0.57
TCOF1-215ENST00000515516 COPS4Q9BT78 406 aa11.5□□□□□ -0.57
TCOF1-215ENST00000515516 SLC22A4Q9H015 551 aa11.5□□□□□ -0.57
TCOF1-215ENST00000515516 MRPL22Q9NWU5 206 aaKnown RBP11.5□□□□□ -0.57
TCOF1-215ENST00000515516 PRPF19Q9UMS4 504 aaKnown RBP11.5□□□□□ -0.57
TCOF1-215ENST00000515516 U3KQV3 271 aa11.5□□□□□ -0.57
TCOF1-215ENST00000515516 FBN3Q75N90 2809 aa11.49□□□□□ -0.57
TCOF1-215ENST00000515516 IGHV3-64DA0A0J9YX35 117 aa11.49□□□□□ -0.57
TCOF1-215ENST00000515516 TCRBV5S2A0A599 114 aa11.49□□□□□ -0.57
TCOF1-215ENST00000515516 GGT3PA6NGU5 568 aa11.49□□□□□ -0.57
TCOF1-215ENST00000515516 FAM107AO95990 144 aa11.49□□□□□ -0.57
TCOF1-215ENST00000515516 CYB5R3P00387 301 aaPredicted RBP11.49□□□□□ -0.57
TCOF1-215ENST00000515516 SPARCP09486 303 aa11.49□□□□□ -0.57
TCOF1-215ENST00000515516 RPS2P15880 293 aaKnown RBP11.49□□□□□ -0.57
TCOF1-215ENST00000515516 BLVRAP53004 296 aa11.49□□□□□ -0.57
TCOF1-215ENST00000515516 HILS1P60008 231 aa11.49□□□□□ -0.57
TCOF1-215ENST00000515516 PPP1R8Q12972 351 aaKnown RBP11.49□□□□□ -0.57
TCOF1-215ENST00000515516 HNRNPA0Q13151 305 aaKnown RBP11.49□□□□□ -0.57
TCOF1-215ENST00000515516 OR8G1Q15617 311 aa11.49□□□□□ -0.57
TCOF1-215ENST00000515516 ARMCX4Q5H9R4 360 aa11.49□□□□□ -0.57
TCOF1-215ENST00000515516 ZNF770Q6IQ21 691 aaPredicted RBP11.49□□□□□ -0.57
TCOF1-215ENST00000515516 DRAM2Q6UX65 266 aa11.49□□□□□ -0.57
TCOF1-215ENST00000515516 NAA40Q86UY6 237 aa11.49□□□□□ -0.57
TCOF1-215ENST00000515516 LNX2Q8N448 690 aa11.49□□□□□ -0.57
TCOF1-215ENST00000515516 SEMA6DQ8NFY4 1073 aa11.49□□□□□ -0.57
TCOF1-215ENST00000515516 OR51L1Q8NGJ5 315 aa11.49□□□□□ -0.57
TCOF1-215ENST00000515516 OR9Q1Q8NGQ5 310 aa11.49□□□□□ -0.57
TCOF1-215ENST00000515516 ERGIC1Q969X5 290 aa11.49□□□□□ -0.57
TCOF1-215ENST00000515516 PLEKHA8Q96JA3 519 aa11.49□□□□□ -0.57
TCOF1-215ENST00000515516 MAP6Q96JE9 813 aa11.49□□□□□ -0.57
TCOF1-215ENST00000515516 SLC6A7Q99884 636 aa11.49□□□□□ -0.57
TCOF1-215ENST00000515516 RBM4Q9BWF3 364 aaKnown RBP11.49□□□□□ -0.57
TCOF1-215ENST00000515516 DGCR6LQ9BY27 220 aa11.49□□□□□ -0.57
TCOF1-215ENST00000515516 PLA2G12AQ9BZM1 189 aa11.49□□□□□ -0.57
TCOF1-215ENST00000515516 NTN4Q9HB63 628 aa11.49□□□□□ -0.57
TCOF1-215ENST00000515516 PNRC2Q9NPJ4 139 aaKnown RBP11.49□□□□□ -0.57
TCOF1-215ENST00000515516 CENPMQ9NSP4 180 aa11.49□□□□□ -0.57
TCOF1-215ENST00000515516 MIOXQ9UGB7 285 aa11.49□□□□□ -0.57
TCOF1-215ENST00000515516 OPN4Q9UHM6 478 aa11.49□□□□□ -0.57
TCOF1-215ENST00000515516 LRCH1Q9Y2L9 728 aa11.49□□□□□ -0.57
TCOF1-215ENST00000515516 AUP1Q9Y679 476 aa11.49□□□□□ -0.57
TCOF1-215ENST00000515516 RIIAD1A6NNX1 92 aa11.48□□□□□ -0.57
TCOF1-215ENST00000515516 CEACAM18A8MTB9 384 aa11.48□□□□□ -0.57
TCOF1-215ENST00000515516 ZNF593O00488 134 aaPredicted RBP11.48□□□□□ -0.57
TCOF1-215ENST00000515516 GNGT2O14610 69 aa11.48□□□□□ -0.57
TCOF1-215ENST00000515516 MLNRO43193 412 aa11.48□□□□□ -0.57
TCOF1-215ENST00000515516 ZNF205O95201 554 aa11.48□□□□□ -0.57
TCOF1-215ENST00000515516 SOX14O95416 240 aa11.48□□□□□ -0.57
TCOF1-215ENST00000515516 HLA-DPB1P04440 258 aa11.48□□□□□ -0.57
TCOF1-215ENST00000515516 ZNF3P17036 446 aa11.48□□□□□ -0.57
TCOF1-215ENST00000515516 RBMXP38159 391 aaKnown RBP11.48□□□□□ -0.57
TCOF1-215ENST00000515516 RPS27P42677 84 aaKnown RBP11.48□□□□□ -0.57
TCOF1-215ENST00000515516 ENTPD1P49961 510 aa11.48□□□□□ -0.57
TCOF1-215ENST00000515516 SLC25A1P53007 311 aa11.48□□□□□ -0.57
TCOF1-215ENST00000515516 ZNF154Q13106 437 aa11.48□□□□□ -0.57
TCOF1-215ENST00000515516 CRMP1Q14194 572 aa11.48□□□□□ -0.57
TCOF1-215ENST00000515516 GK3PQ14409 553 aa11.48□□□□□ -0.57
TCOF1-215ENST00000515516 ZNF181Q2M3W8 571 aa11.48□□□□□ -0.57
TCOF1-215ENST00000515516 BTNL3Q6UXE8 466 aa11.48□□□□□ -0.57
TCOF1-215ENST00000515516 NLRC3Q7RTR2 1065 aa11.48□□□□□ -0.57
TCOF1-215ENST00000515516 DCXRQ7Z4W1 244 aa11.48□□□□□ -0.57
TCOF1-215ENST00000515516 CELF2-AS1Q8N7Q2 184 aa11.48□□□□□ -0.57
TCOF1-215ENST00000515516 OR8D4Q8NGM9 314 aa11.48□□□□□ -0.57
TCOF1-215ENST00000515516 OR6K6Q8NGW6 343 aa11.48□□□□□ -0.57
TCOF1-215ENST00000515516 TEX47Q8TBZ9 253 aa11.48□□□□□ -0.57
TCOF1-215ENST00000515516 FAM216AQ8WUB2 273 aa11.48□□□□□ -0.57
TCOF1-215ENST00000515516 GCDHQ92947 438 aaPredicted RBP11.48□□□□□ -0.57
TCOF1-215ENST00000515516 OTULINQ96BN8 352 aa11.48□□□□□ -0.57
TCOF1-215ENST00000515516 DDOQ99489 341 aa11.48□□□□□ -0.57
TCOF1-215ENST00000515516 SSBP3Q9BWW4 388 aaPredicted RBP11.48□□□□□ -0.57
TCOF1-215ENST00000515516 TMEM165Q9HC07 324 aa11.48□□□□□ -0.57
TCOF1-215ENST00000515516 MMP26Q9NRE1 261 aa11.48□□□□□ -0.57
TCOF1-215ENST00000515516 DDX28Q9NUL7 540 aaKnown RBP11.48□□□□□ -0.57
TCOF1-215ENST00000515516 ARMC1Q9NVT9 282 aa11.48□□□□□ -0.57
TCOF1-215ENST00000515516 POLR3KQ9Y2Y1 108 aaPredicted RBP11.48□□□□□ -0.57
TCOF1-215ENST00000515516 PPIAL4AQ9Y536 164 aa11.48□□□□□ -0.57
TCOF1-215ENST00000515516 N6AMT1Q9Y5N5 214 aa11.48□□□□□ -0.57
TCOF1-215ENST00000515516 CD300LBA8K4G0 201 aa11.47□□□□□ -0.57
TCOF1-215ENST00000515516 A8MXK9 166 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms