RNA–Protein interactions for RNA: ENST00000515063.1

CAST-242, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-242ENST00000515063 P2RY14Q15391 338 aa3.3□□□□□ -1.88
CAST-242ENST00000515063 SHHQ15465 462 aa3.3□□□□□ -1.88
CAST-242ENST00000515063 CARTPTQ16568 116 aa3.3□□□□□ -1.88
CAST-242ENST00000515063 TATDN3Q17R31 274 aa3.3□□□□□ -1.88
CAST-242ENST00000515063 C2orf68Q2NKX9 166 aa3.3□□□□□ -1.88
CAST-242ENST00000515063 SLC36A2Q495M3 483 aa3.3□□□□□ -1.88
CAST-242ENST00000515063 KLHL12Q53G59 568 aa3.3□□□□□ -1.88
CAST-242ENST00000515063 KLHL26Q53HC5 615 aa3.3□□□□□ -1.88
CAST-242ENST00000515063 CT45A2Q5DJT8 189 aa3.3□□□□□ -1.88
CAST-242ENST00000515063 ELFN2Q5R3F8 820 aa3.3□□□□□ -1.88
CAST-242ENST00000515063 ZNF684Q5T5D7 378 aa3.3□□□□□ -1.88
CAST-242ENST00000515063 IDNKQ5T6J7 187 aa3.3□□□□□ -1.88
CAST-242ENST00000515063 ZNF57Q68EA5 555 aaPredicted RBP3.3□□□□□ -1.88
CAST-242ENST00000515063 GPR139Q6DWJ6 353 aa3.3□□□□□ -1.88
CAST-242ENST00000515063 ARL9Q6T311 187 aa3.3□□□□□ -1.88
CAST-242ENST00000515063 C5orf46Q6UWT4 87 aa3.3□□□□□ -1.88
CAST-242ENST00000515063 BTN2A1Q7KYR7 527 aa3.3□□□□□ -1.88
CAST-242ENST00000515063 CEACAM19Q7Z692 300 aa3.3□□□□□ -1.88
CAST-242ENST00000515063 TAF8Q7Z7C8 310 aa3.3□□□□□ -1.88
CAST-242ENST00000515063 HMGN2P46Q86SG4 172 aa3.3□□□□□ -1.88
CAST-242ENST00000515063 PARGQ86W56 976 aa3.3□□□□□ -1.88
CAST-242ENST00000515063 MEX3DQ86XN8 651 aaKnown RBP3.3□□□□□ -1.88
CAST-242ENST00000515063 GKN2Q86XP6 184 aa3.3□□□□□ -1.88
CAST-242ENST00000515063 CACUL1Q86Y37 369 aa3.3□□□□□ -1.88
CAST-242ENST00000515063 SLC35F2Q8IXU6 374 aa3.3□□□□□ -1.88
CAST-242ENST00000515063 YIPF7Q8N8F6 280 aa3.3□□□□□ -1.88
CAST-242ENST00000515063 ZNF615Q8N8J6 731 aa3.3□□□□□ -1.88
CAST-242ENST00000515063 ZFP41Q8N8Y5 198 aa3.3□□□□□ -1.88
CAST-242ENST00000515063 OR10H4Q8NGA5 316 aa3.3□□□□□ -1.88
CAST-242ENST00000515063 OR4M1Q8NGD0 313 aa3.3□□□□□ -1.88
CAST-242ENST00000515063 OR13C2Q8NGS9 318 aa3.3□□□□□ -1.88
CAST-242ENST00000515063 OR6S1Q8NH40 331 aa3.3□□□□□ -1.88
CAST-242ENST00000515063 OR10G6Q8NH81 332 aa3.3□□□□□ -1.88
CAST-242ENST00000515063 OR14L1PQ8NHC6 308 aa3.3□□□□□ -1.88
CAST-242ENST00000515063 TRMT10AQ8TBZ6 339 aaKnown RBP3.3□□□□□ -1.88
CAST-242ENST00000515063 SLC37A2Q8TED4 501 aa3.3□□□□□ -1.88
CAST-242ENST00000515063 NSMAFQ92636 917 aa3.3□□□□□ -1.88
CAST-242ENST00000515063 GHSRQ92847 366 aa3.3□□□□□ -1.88
CAST-242ENST00000515063 RIT1Q92963 219 aa3.3□□□□□ -1.88
CAST-242ENST00000515063 HGDQ93099 445 aa3.3□□□□□ -1.88
CAST-242ENST00000515063 PELI1Q96FA3 418 aa3.3□□□□□ -1.88
CAST-242ENST00000515063 C4orf36Q96KX1 117 aa3.3□□□□□ -1.88
CAST-242ENST00000515063 ART5Q96L15 291 aa3.3□□□□□ -1.88
CAST-242ENST00000515063 DGAT2Q96PD7 388 aa3.3□□□□□ -1.88
CAST-242ENST00000515063 ERMAPQ96PL5 475 aaPredicted RBP3.3□□□□□ -1.88
CAST-242ENST00000515063 CNN2Q99439 309 aaKnown RBP3.3□□□□□ -1.88
CAST-242ENST00000515063 TMEM246Q9BRR3 403 aa3.3□□□□□ -1.88
CAST-242ENST00000515063 UTP23Q9BRU9 249 aaKnown RBP3.3□□□□□ -1.88
CAST-242ENST00000515063 RPP25Q9BUL9 199 aaKnown RBP3.3□□□□□ -1.88
CAST-242ENST00000515063 HCAR1Q9BXC0 346 aa3.3□□□□□ -1.88
CAST-242ENST00000515063 C1QTNF5Q9BXJ0 243 aa3.3□□□□□ -1.88
CAST-242ENST00000515063 LAT2Q9GZY6 243 aa3.3□□□□□ -1.88
CAST-242ENST00000515063 SLITRK2Q9H156 845 aa3.3□□□□□ -1.88
CAST-242ENST00000515063 OR51V1Q9H2C8 321 aa3.3□□□□□ -1.88
CAST-242ENST00000515063 DPAGT1Q9H3H5 408 aa3.3□□□□□ -1.88
CAST-242ENST00000515063 LRRN3Q9H3W5 708 aa3.3□□□□□ -1.88
CAST-242ENST00000515063 ESRP2Q9H6T0 727 aaKnown RBP3.3□□□□□ -1.88
CAST-242ENST00000515063 MARCH7Q9H992 704 aa3.3□□□□□ -1.88
CAST-242ENST00000515063 ISG20L2Q9H9L3 353 aaKnown RBP3.3□□□□□ -1.88
CAST-242ENST00000515063 FKRPQ9H9S5 495 aa3.3□□□□□ -1.88
CAST-242ENST00000515063 UBQLN4Q9NRR5 601 aa3.3□□□□□ -1.88
CAST-242ENST00000515063 MCUBQ9NWR8 336 aa3.3□□□□□ -1.88
CAST-242ENST00000515063 WSB2Q9NYS7 404 aaPredicted RBP3.3□□□□□ -1.88
CAST-242ENST00000515063 C1RLQ9NZP8 487 aa3.3□□□□□ -1.88
CAST-242ENST00000515063 OR14J1Q9UGF5 321 aa3.3□□□□□ -1.88
CAST-242ENST00000515063 NUFIP1Q9UHK0 495 aaKnown RBP3.3□□□□□ -1.88
CAST-242ENST00000515063 RASD1Q9Y272 281 aa3.3□□□□□ -1.88
CAST-242ENST00000515063 MRPS2Q9Y399 296 aaKnown RBP3.3□□□□□ -1.88
CAST-242ENST00000515063 ETV7Q9Y603 341 aa3.3□□□□□ -1.88
CAST-242ENST00000515063 ALG5Q9Y673 324 aa3.3□□□□□ -1.88
CAST-242ENST00000515063 TMEM14AQ9Y6G1 99 aa3.3□□□□□ -1.88
CAST-242ENST00000515063 ATG2BQ96BY7 2078 aa3.3□□□□□ -1.88
CAST-242ENST00000515063 SCN2AQ99250 2005 aa3.3□□□□□ -1.88
CAST-242ENST00000515063 DOCK7Q96N67 2140 aa3.29□□□□□ -1.88
CAST-242ENST00000515063 THADAQ6YHU6 1953 aa3.29□□□□□ -1.88
CAST-242ENST00000515063 TRAV27A0A087WT01 109 aa3.29□□□□□ -1.88
CAST-242ENST00000515063 NPIPA5A0A0B4J1W7 369 aa3.29□□□□□ -1.88
CAST-242ENST00000515063 A0A0G2JMP0 313 aa3.29□□□□□ -1.88
CAST-242ENST00000515063 TRBV5-5A0A0J9YX44 114 aa3.29□□□□□ -1.88
CAST-242ENST00000515063 A0A0X1KG70 313 aa3.29□□□□□ -1.88
CAST-242ENST00000515063 TCRBV21S2A2A0A5A6 115 aa3.29□□□□□ -1.88
CAST-242ENST00000515063 TLCD2A6NGC4 264 aa3.29□□□□□ -1.88
CAST-242ENST00000515063 FRG2CA6NGY1 282 aa3.29□□□□□ -1.88
CAST-242ENST00000515063 ZNF860A6NHJ4 632 aa3.29□□□□□ -1.88
CAST-242ENST00000515063 TUBAL3A6NHL2 446 aa3.29□□□□□ -1.88
CAST-242ENST00000515063 OR6C70A6NIJ9 312 aa3.29□□□□□ -1.88
CAST-242ENST00000515063 SLC9B1P1A6NJY1 282 aa3.29□□□□□ -1.88
CAST-242ENST00000515063 OR6C76A6NM76 312 aa3.29□□□□□ -1.88
CAST-242ENST00000515063 A8MZ25 164 aa3.29□□□□□ -1.88
CAST-242ENST00000515063 E9PI62 339 aa3.29□□□□□ -1.88
CAST-242ENST00000515063 NPIPA7E9PJI5 369 aa3.29□□□□□ -1.88
CAST-242ENST00000515063 C16orf97H3BN30 126 aa3.29□□□□□ -1.88
CAST-242ENST00000515063 GABARAPH6UMI1 98 aa3.29□□□□□ -1.88
CAST-242ENST00000515063 AIPO00170 330 aa3.29□□□□□ -1.88
CAST-242ENST00000515063 P2RY10O00398 339 aa3.29□□□□□ -1.88
CAST-242ENST00000515063 TO15178 435 aa3.29□□□□□ -1.88
CAST-242ENST00000515063 ZNF264O43296 627 aa3.29□□□□□ -1.88
CAST-242ENST00000515063 CDC40O60508 579 aaKnown RBP eCLIP3.29□□□□□ -1.88
CAST-242ENST00000515063 DNAJB6O75190 326 aa3.29□□□□□ -1.88
CAST-242ENST00000515063 RDH16O75452 317 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms