RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 HMMRO75330 724 aa2.79□□□□□ -1.96
HMGCS1-207ENST00000514610 CTAG2O75638 210 aa2.79□□□□□ -1.96
HMGCS1-207ENST00000514610 RBBP9O75884 186 aa2.79□□□□□ -1.96
HMGCS1-207ENST00000514610 OR8G3PP0DMU2 310 aa2.79□□□□□ -1.96
HMGCS1-207ENST00000514610 RAB4AP20338 218 aa2.79□□□□□ -1.96
HMGCS1-207ENST00000514610 IL32P24001 234 aa2.79□□□□□ -1.96
HMGCS1-207ENST00000514610 LOXP28300 417 aaPredicted RBP2.79□□□□□ -1.96
HMGCS1-207ENST00000514610 HMOX2P30519 316 aa2.79□□□□□ -1.96
HMGCS1-207ENST00000514610 RPL23P62829 140 aaKnown RBP2.79□□□□□ -1.96
HMGCS1-207ENST00000514610 CRADDP78560 199 aa2.79□□□□□ -1.96
HMGCS1-207ENST00000514610 IFT88Q13099 833 aa2.79□□□□□ -1.96
HMGCS1-207ENST00000514610 SHHQ15465 462 aa2.79□□□□□ -1.96
HMGCS1-207ENST00000514610 KRTAP13-2Q52LG2 175 aa2.79□□□□□ -1.96
HMGCS1-207ENST00000514610 RNASE13Q5GAN3 156 aaKnown RBP2.79□□□□□ -1.96
HMGCS1-207ENST00000514610 BHLHA15Q7RTS1 189 aaPredicted RBP2.79□□□□□ -1.96
HMGCS1-207ENST00000514610 OR6Q1Q8NGQ2 317 aa2.79□□□□□ -1.96
HMGCS1-207ENST00000514610 TIMM29Q9BSF4 260 aa2.79□□□□□ -1.96
HMGCS1-207ENST00000514610 AUNIPQ9H7T9 357 aa2.79□□□□□ -1.96
HMGCS1-207ENST00000514610 C8orf17Q9NRJ1 99 aa2.79□□□□□ -1.96
HMGCS1-207ENST00000514610 TBC1D24Q9ULP9 559 aa2.79□□□□□ -1.96
HMGCS1-207ENST00000514610 IGLV2-18A0A075B6J9 118 aa2.78□□□□□ -1.96
HMGCS1-207ENST00000514610 KCNE1BA0A087WTH5 132 aa2.78□□□□□ -1.96
HMGCS1-207ENST00000514610 TRAV19A0A0A6YYK7 116 aa2.78□□□□□ -1.96
HMGCS1-207ENST00000514610 TRAV40A0A0B4J280 105 aa2.78□□□□□ -1.96
HMGCS1-207ENST00000514610 KRBOX1C9JBD0 128 aa2.78□□□□□ -1.96
HMGCS1-207ENST00000514610 RPL36A-HNRNPH2H7BZ11 118 aa2.78□□□□□ -1.96
HMGCS1-207ENST00000514610 WRBO00258 174 aa2.78□□□□□ -1.96
HMGCS1-207ENST00000514610 SLC22A5O76082 557 aa2.78□□□□□ -1.96
HMGCS1-207ENST00000514610 RCBTB2O95199 551 aa2.78□□□□□ -1.96
HMGCS1-207ENST00000514610 FGF4P08620 206 aa2.78□□□□□ -1.96
HMGCS1-207ENST00000514610 POLR2MP0CAP2 368 aa2.78□□□□□ -1.96
HMGCS1-207ENST00000514610 CD37P11049 281 aa2.78□□□□□ -1.96
HMGCS1-207ENST00000514610 GSTM3P21266 225 aa2.78□□□□□ -1.96
HMGCS1-207ENST00000514610 USF1P22415 310 aaPredicted RBP2.78□□□□□ -1.96
HMGCS1-207ENST00000514610 RBM34P42696 430 aaKnown RBP2.78□□□□□ -1.96
HMGCS1-207ENST00000514610 SLC1A2P43004 574 aa2.78□□□□□ -1.96
HMGCS1-207ENST00000514610 RPS5P46782 204 aaKnown RBP2.78□□□□□ -1.96
HMGCS1-207ENST00000514610 TAS2R31P59538 309 aa2.78□□□□□ -1.96
HMGCS1-207ENST00000514610 CACNG7P62955 275 aa2.78□□□□□ -1.96
HMGCS1-207ENST00000514610 PITPNAQ00169 270 aa2.78□□□□□ -1.96
HMGCS1-207ENST00000514610 IRF8Q02556 426 aa2.78□□□□□ -1.96
HMGCS1-207ENST00000514610 RBMY1FQ15415 496 aaKnown RBP2.78□□□□□ -1.96
HMGCS1-207ENST00000514610 GCSAMLQ5JQS6 135 aa2.78□□□□□ -1.96
HMGCS1-207ENST00000514610 SNX31Q8N9S9 440 aa2.78□□□□□ -1.96
HMGCS1-207ENST00000514610 OR52P1PQ8NH57 321 aa2.78□□□□□ -1.96
HMGCS1-207ENST00000514610 LILRB4Q8NHJ6 448 aa2.78□□□□□ -1.96
HMGCS1-207ENST00000514610 C17orf50Q8WW18 174 aa2.78□□□□□ -1.96
HMGCS1-207ENST00000514610 DOK1Q99704 481 aa2.78□□□□□ -1.96
HMGCS1-207ENST00000514610 RBBP8Q99708 897 aa2.78□□□□□ -1.96
HMGCS1-207ENST00000514610 GGTLC1Q9BX51 225 aa2.78□□□□□ -1.96
HMGCS1-207ENST00000514610 SLIRPQ9GZT3 109 aaKnown RBP2.78□□□□□ -1.96
HMGCS1-207ENST00000514610 ELOVL6Q9H5J4 265 aa2.78□□□□□ -1.96
HMGCS1-207ENST00000514610 TMEM27Q9HBJ8 222 aa2.78□□□□□ -1.96
HMGCS1-207ENST00000514610 MED4Q9NPJ6 270 aa2.78□□□□□ -1.96
HMGCS1-207ENST00000514610 SLC39A1Q9NY26 324 aa2.78□□□□□ -1.96
HMGCS1-207ENST00000514610 MARCOQ9UEW3 520 aaPredicted RBP2.78□□□□□ -1.96
HMGCS1-207ENST00000514610 IGHV1-69DA0A0B4J2H0 117 aa2.77□□□□□ -1.97
HMGCS1-207ENST00000514610 GABRR3A8MPY1 467 aa2.77□□□□□ -1.97
HMGCS1-207ENST00000514610 ZNF850A8MQ14 1090 aa2.77□□□□□ -1.97
HMGCS1-207ENST00000514610 PDZK1P1A8MUH7 402 aa2.77□□□□□ -1.97
HMGCS1-207ENST00000514610 K7EM74 188 aa2.77□□□□□ -1.97
HMGCS1-207ENST00000514610 NME4O00746 187 aa2.77□□□□□ -1.97
HMGCS1-207ENST00000514610 RRP8O43159 456 aaKnown RBP2.77□□□□□ -1.97
HMGCS1-207ENST00000514610 FCN3O75636 299 aa2.77□□□□□ -1.97
HMGCS1-207ENST00000514610 HPRT1P00492 218 aa2.77□□□□□ -1.97
HMGCS1-207ENST00000514610 CD74P04233 296 aa2.77□□□□□ -1.97
HMGCS1-207ENST00000514610 CD5P06127 495 aa2.77□□□□□ -1.97
HMGCS1-207ENST00000514610 PGA4P0DJD7 388 aa2.77□□□□□ -1.97
HMGCS1-207ENST00000514610 PGA3P0DJD8 388 aa2.77□□□□□ -1.97
HMGCS1-207ENST00000514610 PGA5P0DJD9 388 aa2.77□□□□□ -1.97
HMGCS1-207ENST00000514610 ZNF14P17017 642 aaPredicted RBP2.77□□□□□ -1.97
HMGCS1-207ENST00000514610 CELP19835 753 aa2.77□□□□□ -1.97
HMGCS1-207ENST00000514610 BMI1P35226 326 aa2.77□□□□□ -1.97
HMGCS1-207ENST00000514610 RFC3P40938 356 aa2.77□□□□□ -1.97
HMGCS1-207ENST00000514610 SERPINB8P50452 374 aa2.77□□□□□ -1.97
HMGCS1-207ENST00000514610 NDUFA8P51970 172 aa2.77□□□□□ -1.97
HMGCS1-207ENST00000514610 ZNF121P58317 390 aaPredicted RBP2.77□□□□□ -1.97
HMGCS1-207ENST00000514610 RPS15AP62244 130 aaKnown RBP2.77□□□□□ -1.97
HMGCS1-207ENST00000514610 ART3Q13508 389 aa2.77□□□□□ -1.97
HMGCS1-207ENST00000514610 TRMT5Q32P41 509 aaKnown RBP2.77□□□□□ -1.97
HMGCS1-207ENST00000514610 ADNP2Q6IQ32 1131 aa2.77□□□□□ -1.97
HMGCS1-207ENST00000514610 JAGN1Q8N5M9 183 aa2.77□□□□□ -1.97
HMGCS1-207ENST00000514610 RPEQ96AT9 228 aa2.77□□□□□ -1.97
HMGCS1-207ENST00000514610 DYNLL2Q96FJ2 89 aa2.77□□□□□ -1.97
HMGCS1-207ENST00000514610 UQCC2Q9BRT2 126 aa2.77□□□□□ -1.97
HMGCS1-207ENST00000514610 MRM3Q9HC36 420 aaKnown RBP2.77□□□□□ -1.97
HMGCS1-207ENST00000514610 MRPS30Q9NP92 439 aaKnown RBP2.77□□□□□ -1.97
HMGCS1-207ENST00000514610 SIGLEC9Q9Y336 463 aa2.77□□□□□ -1.97
HMGCS1-207ENST00000514610 COMMD3-BMI1R4GMX3 469 aa2.77□□□□□ -1.97
HMGCS1-207ENST00000514610 S4R3C0 116 aa2.77□□□□□ -1.97
HMGCS1-207ENST00000514610 ANKRD12Q6UB98 2062 aa2.77□□□□□ -1.97
HMGCS1-207ENST00000514610 FHOD3Q2V2M9 1422 aa2.76□□□□□ -1.97
HMGCS1-207ENST00000514610 COL1A2P08123 1366 aa2.76□□□□□ -1.97
HMGCS1-207ENST00000514610 AHDC1Q5TGY3 1603 aaPredicted RBP2.76□□□□□ -1.97
HMGCS1-207ENST00000514610 PHLPP2Q6ZVD8 1323 aa2.76□□□□□ -1.97
HMGCS1-207ENST00000514610 TSPAN11A1L157 253 aa2.76□□□□□ -1.97
HMGCS1-207ENST00000514610 SYCE1LA8MT33 242 aa2.76□□□□□ -1.97
HMGCS1-207ENST00000514610 A8MUU9 505 aa2.76□□□□□ -1.97
HMGCS1-207ENST00000514610 SERPINE3A8MV23 424 aa2.76□□□□□ -1.97
HMGCS1-207ENST00000514610 NDUFC2-KCTD14E9PQ53 114 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms