RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 SERPINF1P36955 418 aa8.41□□□□□ -1.06
TOPBP1-209ENST00000513818 ALDH3B1P43353 468 aa8.41□□□□□ -1.06
TOPBP1-209ENST00000513818 TPTEP56180 551 aa8.41□□□□□ -1.06
TOPBP1-209ENST00000513818 ZNF121P58317 390 aaPredicted RBP8.41□□□□□ -1.06
TOPBP1-209ENST00000513818 MFGE8Q08431 387 aaPredicted RBP8.41□□□□□ -1.06
TOPBP1-209ENST00000513818 POU4F2Q12837 409 aa8.41□□□□□ -1.06
TOPBP1-209ENST00000513818 ECH1Q13011 328 aa8.41□□□□□ -1.06
TOPBP1-209ENST00000513818 CDK5R2Q13319 367 aa8.41□□□□□ -1.06
TOPBP1-209ENST00000513818 IL18R1Q13478 541 aa8.41□□□□□ -1.06
TOPBP1-209ENST00000513818 GFOD2Q3B7J2 385 aa8.41□□□□□ -1.06
TOPBP1-209ENST00000513818 TP53I3Q53FA7 332 aa8.41□□□□□ -1.06
TOPBP1-209ENST00000513818 C11orf71Q6IPW1 123 aa8.41□□□□□ -1.06
TOPBP1-209ENST00000513818 ZNF544Q6NX49 715 aa8.41□□□□□ -1.06
TOPBP1-209ENST00000513818 ZNF322Q6U7Q0 402 aaPredicted RBP8.41□□□□□ -1.06
TOPBP1-209ENST00000513818 C20orf204Q6ZNR8 217 aa8.41□□□□□ -1.06
TOPBP1-209ENST00000513818 FAM57BQ71RH2 274 aa8.41□□□□□ -1.06
TOPBP1-209ENST00000513818 THAP5Q7Z6K1 395 aa8.41□□□□□ -1.06
TOPBP1-209ENST00000513818 ZCCHC24Q8N2G6 241 aaKnown RBP8.41□□□□□ -1.06
TOPBP1-209ENST00000513818 SGCDQ92629 289 aa8.41□□□□□ -1.06
TOPBP1-209ENST00000513818 SPTSSAQ969W0 71 aa8.41□□□□□ -1.06
TOPBP1-209ENST00000513818 MRPL24Q96A35 216 aaKnown RBP8.41□□□□□ -1.06
TOPBP1-209ENST00000513818 RHOVQ96L33 236 aa8.41□□□□□ -1.06
TOPBP1-209ENST00000513818 Q96MT0 163 aa8.41□□□□□ -1.06
TOPBP1-209ENST00000513818 DOK1Q99704 481 aa8.41□□□□□ -1.06
TOPBP1-209ENST00000513818 ARPC5LQ9BPX5 153 aa8.41□□□□□ -1.06
TOPBP1-209ENST00000513818 CACNG6Q9BXT2 260 aa8.41□□□□□ -1.06
TOPBP1-209ENST00000513818 TPK1Q9H3S4 243 aa8.41□□□□□ -1.06
TOPBP1-209ENST00000513818 PLK3Q9H4B4 646 aa8.41□□□□□ -1.06
TOPBP1-209ENST00000513818 ELOVL3Q9HB03 270 aa8.41□□□□□ -1.06
TOPBP1-209ENST00000513818 ACOXLQ9NUZ1 547 aa8.41□□□□□ -1.06
TOPBP1-209ENST00000513818 MRM2Q9UI43 246 aaKnown RBP8.41□□□□□ -1.06
TOPBP1-209ENST00000513818 CMAHPQ9Y471 501 aa8.41□□□□□ -1.06
TOPBP1-209ENST00000513818 SPG11Q96JI7 2443 aa8.41□□□□□ -1.06
TOPBP1-209ENST00000513818 TMEM129A0AVI4 362 aa8.4□□□□□ -1.06
TOPBP1-209ENST00000513818 H0YJX3 145 aa8.4□□□□□ -1.06
TOPBP1-209ENST00000513818 H3BSH0 61 aa8.4□□□□□ -1.06
TOPBP1-209ENST00000513818 J3QRE1 110 aa8.4□□□□□ -1.06
TOPBP1-209ENST00000513818 RPP14O95059 124 aaKnown RBP8.4□□□□□ -1.06
TOPBP1-209ENST00000513818 OR2T7P0C7T2 308 aa8.4□□□□□ -1.06
TOPBP1-209ENST00000513818 OTX1P32242 354 aaPredicted RBP8.4□□□□□ -1.06
TOPBP1-209ENST00000513818 PSMB10P40306 273 aa8.4□□□□□ -1.06
TOPBP1-209ENST00000513818 RAD52P43351 418 aa8.4□□□□□ -1.06
TOPBP1-209ENST00000513818 RPS23P62266 143 aaKnown RBP8.4□□□□□ -1.06
TOPBP1-209ENST00000513818 GRB2P62993 217 aaKnown RBP8.4□□□□□ -1.06
TOPBP1-209ENST00000513818 MVKQ03426 396 aa8.4□□□□□ -1.06
TOPBP1-209ENST00000513818 HNRNPA0Q13151 305 aaKnown RBP8.4□□□□□ -1.06
TOPBP1-209ENST00000513818 TMED1Q13445 227 aa8.4□□□□□ -1.06
TOPBP1-209ENST00000513818 MST1LQ2TV78 715 aa8.4□□□□□ -1.06
TOPBP1-209ENST00000513818 GLYATL3Q5SZD4 288 aa8.4□□□□□ -1.06
TOPBP1-209ENST00000513818 AGAP6Q5VW22 663 aa8.4□□□□□ -1.06
TOPBP1-209ENST00000513818 DTX2Q86UW9 622 aa8.4□□□□□ -1.06
TOPBP1-209ENST00000513818 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.4□□□□□ -1.06
TOPBP1-209ENST00000513818 OR5AS1Q8N127 324 aa8.4□□□□□ -1.06
TOPBP1-209ENST00000513818 BHLHE23Q8NDY6 225 aa8.4□□□□□ -1.06
TOPBP1-209ENST00000513818 BPIFB6Q8NFQ5 453 aa8.4□□□□□ -1.06
TOPBP1-209ENST00000513818 OR2T27Q8NH04 317 aa8.4□□□□□ -1.06
TOPBP1-209ENST00000513818 SYNPRQ8TBG9 265 aa8.4□□□□□ -1.06
TOPBP1-209ENST00000513818 KLF14Q8TD94 323 aaPredicted RBP8.4□□□□□ -1.06
TOPBP1-209ENST00000513818 FBLIM1Q8WUP2 373 aa8.4□□□□□ -1.06
TOPBP1-209ENST00000513818 IGFBPL1Q8WX77 278 aa8.4□□□□□ -1.06
TOPBP1-209ENST00000513818 PPP1R14AQ96A00 147 aa8.4□□□□□ -1.06
TOPBP1-209ENST00000513818 PERPQ96FX8 193 aa8.4□□□□□ -1.06
TOPBP1-209ENST00000513818 MARS2Q96GW9 593 aaKnown RBP8.4□□□□□ -1.06
TOPBP1-209ENST00000513818 DCLRE1CQ96SD1 692 aaKnown RBP8.4□□□□□ -1.06
TOPBP1-209ENST00000513818 ZNF184Q99676 751 aaPredicted RBP8.4□□□□□ -1.06
TOPBP1-209ENST00000513818 C1QTNF5Q9BXJ0 243 aa8.4□□□□□ -1.06
TOPBP1-209ENST00000513818 ANKRD60Q9BZ19 345 aa8.4□□□□□ -1.06
TOPBP1-209ENST00000513818 BCL2L14Q9BZR8 327 aa8.4□□□□□ -1.06
TOPBP1-209ENST00000513818 DYNLRB1Q9NP97 96 aa8.4□□□□□ -1.06
TOPBP1-209ENST00000513818 CBLN4Q9NTU7 201 aa8.4□□□□□ -1.06
TOPBP1-209ENST00000513818 FAIMQ9NVQ4 179 aa8.4□□□□□ -1.06
TOPBP1-209ENST00000513818 TBCCD1Q9NVR7 557 aa8.4□□□□□ -1.06
TOPBP1-209ENST00000513818 ZNF319Q9P2F9 582 aa8.4□□□□□ -1.06
TOPBP1-209ENST00000513818 ITGB1BP2Q9UKP3 347 aa8.4□□□□□ -1.06
TOPBP1-209ENST00000513818 GTF2A1LQ9UNN4 478 aa8.4□□□□□ -1.06
TOPBP1-209ENST00000513818 EXOGQ9Y2C4 368 aaKnown RBP8.4□□□□□ -1.06
TOPBP1-209ENST00000513818 TMEM14AQ9Y6G1 99 aa8.4□□□□□ -1.06
TOPBP1-209ENST00000513818 DAPL1A0PJW8 107 aa8.39□□□□□ -1.07
TOPBP1-209ENST00000513818 SNTNA6NMZ2 147 aa8.39□□□□□ -1.07
TOPBP1-209ENST00000513818 LILRA1O75019 489 aa8.39□□□□□ -1.07
TOPBP1-209ENST00000513818 LY6HO94772 140 aa8.39□□□□□ -1.07
TOPBP1-209ENST00000513818 PNPP00491 289 aa8.39□□□□□ -1.07
TOPBP1-209ENST00000513818 NAT2P11245 290 aa8.39□□□□□ -1.07
TOPBP1-209ENST00000513818 MYF6P23409 242 aa8.39□□□□□ -1.07
TOPBP1-209ENST00000513818 DNASE1P24855 282 aa8.39□□□□□ -1.07
TOPBP1-209ENST00000513818 GCH1P30793 250 aa8.39□□□□□ -1.07
TOPBP1-209ENST00000513818 SLC15A1P46059 708 aa8.39□□□□□ -1.07
TOPBP1-209ENST00000513818 HSPA13P48723 471 aa8.39□□□□□ -1.07
TOPBP1-209ENST00000513818 RIDAP52758 137 aaKnown RBP8.39□□□□□ -1.07
TOPBP1-209ENST00000513818 KLF3P57682 345 aaPredicted RBP8.39□□□□□ -1.07
TOPBP1-209ENST00000513818 SNRPD2P62316 118 aaKnown RBP8.39□□□□□ -1.07
TOPBP1-209ENST00000513818 ACTC1P68032 377 aa8.39□□□□□ -1.07
TOPBP1-209ENST00000513818 ACTA1P68133 377 aa8.39□□□□□ -1.07
TOPBP1-209ENST00000513818 ROM1Q03395 351 aa8.39□□□□□ -1.07
TOPBP1-209ENST00000513818 PSG7Q13046 419 aa8.39□□□□□ -1.07
TOPBP1-209ENST00000513818 EFNB3Q15768 340 aa8.39□□□□□ -1.07
TOPBP1-209ENST00000513818 NKPD1Q17RQ9 610 aa8.39□□□□□ -1.07
TOPBP1-209ENST00000513818 OR2T2Q6IF00 324 aa8.39□□□□□ -1.07
TOPBP1-209ENST00000513818 KCTD18Q6PI47 426 aaPredicted RBP8.39□□□□□ -1.07
TOPBP1-209ENST00000513818 ARL9Q6T311 187 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms