RNA–Protein interactions for RNA: ENST00000513349.5

DROSHA-220, Transcript of drosha ribonuclease III, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DROSHA, Length 4,681 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DROSHA-220ENST00000513349 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.2□□□□□ -1.1
DROSHA-220ENST00000513349 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.2□□□□□ -1.1
DROSHA-220ENST00000513349 DOK2O60496 412 aa8.2□□□□□ -1.1
DROSHA-220ENST00000513349 KCNJ3P48549 501 aa8.2□□□□□ -1.1
DROSHA-220ENST00000513349 HNRNPKP61978 463 aaKnown RBP eCLIP8.2□□□□□ -1.16e-17■■■■■ 51.5
DROSHA-220ENST00000513349 MRPS34P82930 218 aaKnown RBP8.2□□□□□ -1.1
DROSHA-220ENST00000513349 GGTLC2Q14390 218 aa8.2□□□□□ -1.1
DROSHA-220ENST00000513349 FAM78AQ5JUQ0 283 aa8.2□□□□□ -1.1
DROSHA-220ENST00000513349 UBE3DQ7Z6J8 389 aa8.2□□□□□ -1.1
DROSHA-220ENST00000513349 ZNF610Q8N9Z0 462 aa8.2□□□□□ -1.1
DROSHA-220ENST00000513349 SLC38A9Q8NBW4 561 aa8.2□□□□□ -1.1
DROSHA-220ENST00000513349 ZNF2Q9BSG1 426 aaPredicted RBP8.2□□□□□ -1.1
DROSHA-220ENST00000513349 NPDC1Q9NQX5 325 aaPredicted RBP8.2□□□□□ -1.1
DROSHA-220ENST00000513349 CUTCQ9NTM9 273 aa8.2□□□□□ -1.1
DROSHA-220ENST00000513349 PCDHGA5Q9Y5G8 931 aa8.2□□□□□ -1.1
DROSHA-220ENST00000513349 URGCP-MRPS24S4R325 110 aa8.2□□□□□ -1.1
DROSHA-220ENST00000513349 ARID1BQ8NFD5 2236 aaPredicted RBP8.19□□□□□ -1.1
DROSHA-220ENST00000513349 SERPINE3A8MV23 424 aa8.19□□□□□ -1.1
DROSHA-220ENST00000513349 TNFRSF4P43489 277 aa8.19□□□□□ -1.1
DROSHA-220ENST00000513349 GSK3AP49840 483 aa8.19□□□□□ -1.1
DROSHA-220ENST00000513349 MFAP5Q13361 173 aa8.19□□□□□ -1.1
DROSHA-220ENST00000513349 AGBL4Q5VU57 503 aa8.19□□□□□ -1.1
DROSHA-220ENST00000513349 SLC16A13Q7RTY0 426 aa8.19□□□□□ -1.1
DROSHA-220ENST00000513349 MARCH3Q86UD3 253 aa8.19□□□□□ -1.1
DROSHA-220ENST00000513349 OR5D18Q8NGL1 313 aa8.19□□□□□ -1.1
DROSHA-220ENST00000513349 C16orf52Q8NHV5 167 aa8.19□□□□□ -1.1
DROSHA-220ENST00000513349 GPX8Q8TED1 209 aa8.19□□□□□ -1.1
DROSHA-220ENST00000513349 OR1E3Q8WZA6 343 aa8.19□□□□□ -1.1
DROSHA-220ENST00000513349 SLX1AQ9BQ83 275 aa8.19□□□□□ -1.1
DROSHA-220ENST00000513349 CHRNA9Q9UGM1 479 aa8.19□□□□□ -1.1
DROSHA-220ENST00000513349 MRM2Q9UI43 246 aaKnown RBP8.19□□□□□ -1.1
DROSHA-220ENST00000513349 CDC14CA4D256 554 aa8.19□□□□□ -1.1
DROSHA-220ENST00000513349 IDSB3KWA1 339 aa8.19□□□□□ -1.1
DROSHA-220ENST00000513349 PPP5D1E7EU14 171 aa8.19□□□□□ -1.1
DROSHA-220ENST00000513349 SCGB1D1O95968 90 aa8.19□□□□□ -1.1
DROSHA-220ENST00000513349 TIMP1P01033 207 aa8.19□□□□□ -1.1
DROSHA-220ENST00000513349 OR5T1Q8NG75 326 aa8.19□□□□□ -1.1
DROSHA-220ENST00000513349 OR4D6Q8NGJ1 314 aa8.19□□□□□ -1.1
DROSHA-220ENST00000513349 SGK3Q96BR1 496 aa8.19□□□□□ -1.1
DROSHA-220ENST00000513349 TVP23CQ96ET8 276 aa8.19□□□□□ -1.1
DROSHA-220ENST00000513349 MRGPRX3Q96LB0 322 aa8.19□□□□□ -1.1
DROSHA-220ENST00000513349 SLC35B3Q9H1N7 401 aa8.19□□□□□ -1.1
DROSHA-220ENST00000513349 KCNIP1Q9NZI2 227 aa8.19□□□□□ -1.1
DROSHA-220ENST00000513349 OR6C76A6NM76 312 aa8.19□□□□□ -1.1
DROSHA-220ENST00000513349 A8MXK9 166 aa8.19□□□□□ -1.1
DROSHA-220ENST00000513349 MFNGO00587 321 aa8.19□□□□□ -1.1
DROSHA-220ENST00000513349 HLA-HP01893 362 aa8.19□□□□□ -1.1
DROSHA-220ENST00000513349 GLAP06280 429 aa8.19□□□□□ -1.1
DROSHA-220ENST00000513349 SPP1P10451 314 aa8.19□□□□□ -1.1
DROSHA-220ENST00000513349 APOBEC1P41238 236 aaKnown RBP8.19□□□□□ -1.1
DROSHA-220ENST00000513349 ZNF136P52737 540 aa8.19□□□□□ -1.1
DROSHA-220ENST00000513349 MIDNQ504T8 468 aa8.19□□□□□ -1.1
DROSHA-220ENST00000513349 MITD1Q8WV92 249 aa8.19□□□□□ -1.1
DROSHA-220ENST00000513349 PGLYRP3Q96LB9 341 aa8.19□□□□□ -1.1
DROSHA-220ENST00000513349 SLC39A9Q9NUM3 307 aa8.19□□□□□ -1.1
DROSHA-220ENST00000513349 SLC17A4Q9Y2C5 497 aa8.19□□□□□ -1.1
DROSHA-220ENST00000513349 RGPD3A6NKT7 1758 aaPredicted RBP8.18□□□□□ -1.1
DROSHA-220ENST00000513349 RGPD4Q7Z3J3 1758 aa8.18□□□□□ -1.1
DROSHA-220ENST00000513349 OR4C45A6NMZ5 311 aa8.18□□□□□ -1.1
DROSHA-220ENST00000513349 MT-CO2P00403 227 aa8.18□□□□□ -1.1
DROSHA-220ENST00000513349 CEACAM5P06731 702 aa8.18□□□□□ -1.1
DROSHA-220ENST00000513349 HOXC12P31275 282 aa8.18□□□□□ -1.1
DROSHA-220ENST00000513349 HTRA3P83110 453 aa8.18□□□□□ -1.1
DROSHA-220ENST00000513349 ELAVL1Q15717 326 aaKnown RBP8.18□□□□□ -1.1
DROSHA-220ENST00000513349 MSMO1Q15800 293 aa8.18□□□□□ -1.1
DROSHA-220ENST00000513349 ZNF141Q15928 474 aa8.18□□□□□ -1.1
DROSHA-220ENST00000513349 TMEM41BQ5BJD5 291 aa8.18□□□□□ -1.1
DROSHA-220ENST00000513349 MKXQ8IYA7 352 aa8.18□□□□□ -1.1
DROSHA-220ENST00000513349 NPEPL1Q8NDH3 523 aa8.18□□□□□ -1.1
DROSHA-220ENST00000513349 GJC3Q8NFK1 279 aa8.18□□□□□ -1.1
DROSHA-220ENST00000513349 ARSGQ96EG1 525 aa8.18□□□□□ -1.1
DROSHA-220ENST00000513349 PIK3IP1Q96FE7 263 aa8.18□□□□□ -1.1
DROSHA-220ENST00000513349 SUCNR1Q9BXA5 334 aa8.18□□□□□ -1.1
DROSHA-220ENST00000513349 C8orf33Q9H7E9 229 aaPredicted RBP8.18□□□□□ -1.1
DROSHA-220ENST00000513349 GDF2Q9UK05 429 aaPredicted RBP8.18□□□□□ -1.1
DROSHA-220ENST00000513349 ING1Q9UK53 422 aaPredicted RBP8.18□□□□□ -1.1
DROSHA-220ENST00000513349 FAM96BQ9Y3D0 163 aa8.18□□□□□ -1.1
DROSHA-220ENST00000513349 NPTNQ9Y639 398 aa8.18□□□□□ -1.1
DROSHA-220ENST00000513349 VSIG10L2P0DP72 767 aa8.18□□□□□ -1.1
DROSHA-220ENST00000513349 ABOP16442 354 aa8.18□□□□□ -1.1
DROSHA-220ENST00000513349 DRD1P21728 446 aa8.18□□□□□ -1.1
DROSHA-220ENST00000513349 MSX1P28360 303 aa8.18□□□□□ -1.1
DROSHA-220ENST00000513349 CDKN2AP42771 156 aaKnown RBP8.18□□□□□ -1.1
DROSHA-220ENST00000513349 PCBD1P61457 104 aa8.18□□□□□ -1.1
DROSHA-220ENST00000513349 RAB11AP62491 216 aa8.18□□□□□ -1.1
DROSHA-220ENST00000513349 OR51A2Q8NGJ7 313 aa8.18□□□□□ -1.1
DROSHA-220ENST00000513349 FAM174AQ8TBP5 190 aa8.18□□□□□ -1.1
DROSHA-220ENST00000513349 STT3BQ8TCJ2 826 aa8.18□□□□□ -1.1
DROSHA-220ENST00000513349 ATOH1Q92858 354 aaPredicted RBP8.18□□□□□ -1.1
DROSHA-220ENST00000513349 MRPS24Q96EL2 167 aaKnown RBP8.18□□□□□ -1.1
DROSHA-220ENST00000513349 COX14Q96I36 57 aa8.18□□□□□ -1.1
DROSHA-220ENST00000513349 BCO1Q9HAY6 547 aa8.18□□□□□ -1.1
DROSHA-220ENST00000513349 CHST11Q9NPF2 352 aa8.18□□□□□ -1.1
DROSHA-220ENST00000513349 LRP12Q9Y561 859 aa8.18□□□□□ -1.1
DROSHA-220ENST00000513349 LRP5LA4QPB2 252 aa8.18□□□□□ -1.1
DROSHA-220ENST00000513349 FTCDNL1E5RQL4 147 aa8.18□□□□□ -1.1
DROSHA-220ENST00000513349 SDCBPO00560 298 aaPredicted RBP8.18□□□□□ -1.1
DROSHA-220ENST00000513349 CXCL10P02778 98 aa8.18□□□□□ -1.1
DROSHA-220ENST00000513349 RAC2P15153 192 aa8.18□□□□□ -1.1
DROSHA-220ENST00000513349 PI3P19957 117 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms