RNA–Protein interactions for RNA: ENST00000512452.1

DEPDC1B-206, Transcript of DEP domain containing 1B, humanhuman

TSL 2

Gene DEPDC1B, Length 661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-206ENST00000512452 EMC7Q9NPA0 242 aa11.57□□□□□ -0.56
DEPDC1B-206ENST00000512452 RBFOX1Q9NWB1 397 aaKnown RBP11.57□□□□□ -0.56
DEPDC1B-206ENST00000512452 MALT1Q9UDY8 824 aa11.57□□□□□ -0.56
DEPDC1B-206ENST00000512452 OR5V1Q9UGF6 321 aa11.57□□□□□ -0.56
DEPDC1B-206ENST00000512452 FBXL3Q9UKT7 428 aa11.57□□□□□ -0.56
DEPDC1B-206ENST00000512452 FREM3P0C091 2139 aa11.56□□□□□ -0.56
DEPDC1B-206ENST00000512452 IGHV3-15A0A0B4J1V0 119 aa11.56□□□□□ -0.56
DEPDC1B-206ENST00000512452 OR6C65A6NJZ3 312 aa11.56□□□□□ -0.56
DEPDC1B-206ENST00000512452 CXCL13O43927 109 aa11.56□□□□□ -0.56
DEPDC1B-206ENST00000512452 ACTL6AO96019 429 aa11.56□□□□□ -0.56
DEPDC1B-206ENST00000512452 HNRNPCP07910 306 aaKnown RBP eCLIP11.56□□□□□ -0.56
DEPDC1B-206ENST00000512452 PRF1P14222 555 aa11.56□□□□□ -0.56
DEPDC1B-206ENST00000512452 GNLYP22749 145 aa11.56□□□□□ -0.56
DEPDC1B-206ENST00000512452 HSD11B1P28845 292 aa11.56□□□□□ -0.56
DEPDC1B-206ENST00000512452 MAGEB1P43366 347 aa11.56□□□□□ -0.56
DEPDC1B-206ENST00000512452 EIF1AXP47813 144 aaKnown RBP11.56□□□□□ -0.56
DEPDC1B-206ENST00000512452 LHX2P50458 406 aa11.56□□□□□ -0.56
DEPDC1B-206ENST00000512452 ART1P52961 327 aa11.56□□□□□ -0.56
DEPDC1B-206ENST00000512452 SRSF6Q13247 344 aaKnown RBP11.56□□□□□ -0.56
DEPDC1B-206ENST00000512452 TAB1Q15750 504 aa11.56□□□□□ -0.56
DEPDC1B-206ENST00000512452 RAB11BQ15907 218 aa11.56□□□□□ -0.56
DEPDC1B-206ENST00000512452 HES5Q5TA89 166 aa11.56□□□□□ -0.56
DEPDC1B-206ENST00000512452 FAM27BQ5VT28 67 aa11.56□□□□□ -0.56
DEPDC1B-206ENST00000512452 OTPQ5XKR4 325 aa11.56□□□□□ -0.56
DEPDC1B-206ENST00000512452 FAM166AQ6J272 317 aa11.56□□□□□ -0.56
DEPDC1B-206ENST00000512452 CORO6Q6QEF8 472 aa11.56□□□□□ -0.56
DEPDC1B-206ENST00000512452 LINC00696Q6ZRV3 163 aa11.56□□□□□ -0.56
DEPDC1B-206ENST00000512452 AAED1Q7RTV5 226 aa11.56□□□□□ -0.56
DEPDC1B-206ENST00000512452 MEIOBQ8N635 442 aa11.56□□□□□ -0.56
DEPDC1B-206ENST00000512452 ZFP62Q8NB50 900 aaPredicted RBP11.56□□□□□ -0.56
DEPDC1B-206ENST00000512452 OR13C3Q8NGS6 347 aa11.56□□□□□ -0.56
DEPDC1B-206ENST00000512452 ENKURQ8TC29 256 aa11.56□□□□□ -0.56
DEPDC1B-206ENST00000512452 TRIM63Q969Q1 353 aa11.56□□□□□ -0.56
DEPDC1B-206ENST00000512452 NABP1Q96AH0 204 aa11.56□□□□□ -0.56
DEPDC1B-206ENST00000512452 HAVCR1Q96D42 359 aa11.56□□□□□ -0.56
DEPDC1B-206ENST00000512452 S100A16Q96FQ6 103 aaKnown RBP11.56□□□□□ -0.56
DEPDC1B-206ENST00000512452 THAP7Q9BT49 309 aaPredicted RBP11.56□□□□□ -0.56
DEPDC1B-206ENST00000512452 PBOV1Q9GZY1 135 aa11.56□□□□□ -0.56
DEPDC1B-206ENST00000512452 PLEKHA1Q9HB21 404 aa11.56□□□□□ -0.56
DEPDC1B-206ENST00000512452 ACKR4Q9NPB9 350 aa11.56□□□□□ -0.56
DEPDC1B-206ENST00000512452 PNRC2Q9NPJ4 139 aaKnown RBP11.56□□□□□ -0.56
DEPDC1B-206ENST00000512452 RHBDL2Q9NX52 303 aa11.56□□□□□ -0.56
DEPDC1B-206ENST00000512452 ASH2LQ9UBL3 628 aa11.56□□□□□ -0.56
DEPDC1B-206ENST00000512452 ITGB1BP2Q9UKP3 347 aa11.56□□□□□ -0.56
DEPDC1B-206ENST00000512452 KIAA1549Q9HCM3 1950 aa11.56□□□□□ -0.56
DEPDC1B-206ENST00000512452 DOCK10Q96BY6 2186 aa11.55□□□□□ -0.56
DEPDC1B-206ENST00000512452 A0A1B0GVI7 797 aa11.55□□□□□ -0.56
DEPDC1B-206ENST00000512452 LYRM1O43325 122 aa11.55□□□□□ -0.56
DEPDC1B-206ENST00000512452 TTRP02766 147 aa11.55□□□□□ -0.56
DEPDC1B-206ENST00000512452 MAS1P04201 325 aa11.55□□□□□ -0.56
DEPDC1B-206ENST00000512452 CST2P09228 141 aa11.55□□□□□ -0.56
DEPDC1B-206ENST00000512452 ACSM4P0C7M7 580 aa11.55□□□□□ -0.56
DEPDC1B-206ENST00000512452 ZNF708P17019 499 aa11.55□□□□□ -0.56
DEPDC1B-206ENST00000512452 CCL1P22362 96 aa11.55□□□□□ -0.56
DEPDC1B-206ENST00000512452 CDAP32320 146 aa11.55□□□□□ -0.56
DEPDC1B-206ENST00000512452 PLGLB1Q02325 96 aa11.55□□□□□ -0.56
DEPDC1B-206ENST00000512452 ECH1Q13011 328 aa11.55□□□□□ -0.56
DEPDC1B-206ENST00000512452 ENDOGQ14249 297 aaKnown RBP11.55□□□□□ -0.56
DEPDC1B-206ENST00000512452 NRN1LQ496H8 165 aa11.55□□□□□ -0.56
DEPDC1B-206ENST00000512452 FCRLAQ7L513 359 aa11.55□□□□□ -0.56
DEPDC1B-206ENST00000512452 CDH26Q8IXH8 852 aa11.55□□□□□ -0.56
DEPDC1B-206ENST00000512452 CMTM4Q8IZR5 234 aa11.55□□□□□ -0.56
DEPDC1B-206ENST00000512452 GPR137CQ8N3F9 429 aa11.55□□□□□ -0.56
DEPDC1B-206ENST00000512452 TMEM251Q8N6I4 163 aa11.55□□□□□ -0.56
DEPDC1B-206ENST00000512452 DRAXINQ8NBI3 349 aaPredicted RBP11.55□□□□□ -0.56
DEPDC1B-206ENST00000512452 TMEM178AQ8NBL3 297 aa11.55□□□□□ -0.56
DEPDC1B-206ENST00000512452 OR6M1Q8NGM8 313 aa11.55□□□□□ -0.56
DEPDC1B-206ENST00000512452 SMIM4Q8WVI0 70 aa11.55□□□□□ -0.56
DEPDC1B-206ENST00000512452 ORAI1Q96D31 301 aa11.55□□□□□ -0.56
DEPDC1B-206ENST00000512452 SLC25A38Q96DW6 304 aa11.55□□□□□ -0.56
DEPDC1B-206ENST00000512452 ABHD1Q96SE0 405 aa11.55□□□□□ -0.56
DEPDC1B-206ENST00000512452 ZNF416Q9BWM5 594 aa11.55□□□□□ -0.56
DEPDC1B-206ENST00000512452 LINC00470Q9BZP3 86 aa11.55□□□□□ -0.56
DEPDC1B-206ENST00000512452 HDHD2Q9H0R4 259 aa11.55□□□□□ -0.56
DEPDC1B-206ENST00000512452 ZNF275Q9NSD4 429 aaPredicted RBP11.55□□□□□ -0.56
DEPDC1B-206ENST00000512452 EMC3Q9P0I2 261 aa11.55□□□□□ -0.56
DEPDC1B-206ENST00000512452 PDZD2O15018 2839 aa11.55□□□□□ -0.56
DEPDC1B-206ENST00000512452 CELSR1Q9NYQ6 3014 aa11.55□□□□□ -0.56
DEPDC1B-206ENST00000512452 ALPK2Q86TB3 2170 aa11.54□□□□□ -0.56
DEPDC1B-206ENST00000512452 A0A0B4J203 849 aa11.54□□□□□ -0.56
DEPDC1B-206ENST00000512452 LOC100289279A0A1B0GTE1 492 aa11.54□□□□□ -0.56
DEPDC1B-206ENST00000512452 LOC390937A0A1W2PQ73 354 aa11.54□□□□□ -0.56
DEPDC1B-206ENST00000512452 ARGFXA6NJG6 315 aa11.54□□□□□ -0.56
DEPDC1B-206ENST00000512452 CENPXA8MT69 81 aa11.54□□□□□ -0.56
DEPDC1B-206ENST00000512452 ACOT7O00154 380 aa11.54□□□□□ -0.56
DEPDC1B-206ENST00000512452 SYT7O43581 403 aa11.54□□□□□ -0.56
DEPDC1B-206ENST00000512452 SYNGR4O95473 234 aa11.54□□□□□ -0.56
DEPDC1B-206ENST00000512452 ERCC1P07992 297 aaPredicted RBP11.54□□□□□ -0.56
DEPDC1B-206ENST00000512452 TRAPPC2P0DI81 140 aa11.54□□□□□ -0.56
DEPDC1B-206ENST00000512452 TRAPPC2BP0DI82 140 aa11.54□□□□□ -0.56
DEPDC1B-206ENST00000512452 SELENOPP49908 381 aa11.54□□□□□ -0.56
DEPDC1B-206ENST00000512452 MEOX1P50221 254 aa11.54□□□□□ -0.56
DEPDC1B-206ENST00000512452 CLDN15P56746 228 aa11.54□□□□□ -0.56
DEPDC1B-206ENST00000512452 CLDN18P56856 261 aa11.54□□□□□ -0.56
DEPDC1B-206ENST00000512452 DYRK1AQ13627 763 aa11.54□□□□□ -0.56
DEPDC1B-206ENST00000512452 SGCAQ16586 387 aa11.54□□□□□ -0.56
DEPDC1B-206ENST00000512452 ODF4Q2M2E3 257 aa11.54□□□□□ -0.56
DEPDC1B-206ENST00000512452 PHYHD1Q5SRE7 291 aa11.54□□□□□ -0.56
DEPDC1B-206ENST00000512452 C1orf100Q5SVJ3 147 aa11.54□□□□□ -0.56
DEPDC1B-206ENST00000512452 AGAP6Q5VW22 663 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms