RNA–Protein interactions for RNA: ENST00000512418.5

CCHCR1-229, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-229ENST00000512418 HLA-DPB1P04440 258 aa12.3□□□□□ -0.44
CCHCR1-229ENST00000512418 RNASE1P07998 156 aaKnown RBP12.3□□□□□ -0.44
CCHCR1-229ENST00000512418 HSD17B1P14061 328 aa12.3□□□□□ -0.44
CCHCR1-229ENST00000512418 IRF2P14316 349 aa12.3□□□□□ -0.44
CCHCR1-229ENST00000512418 MTNR1AP48039 350 aa12.3□□□□□ -0.44
CCHCR1-229ENST00000512418 TRAP1Q12931 704 aaKnown RBP12.3□□□□□ -0.44
CCHCR1-229ENST00000512418 MALLQ13021 153 aa12.3□□□□□ -0.44
CCHCR1-229ENST00000512418 SHISA2Q6UWI4 295 aa12.3□□□□□ -0.44
CCHCR1-229ENST00000512418 ZNF620Q6ZNG0 422 aa12.3□□□□□ -0.44
CCHCR1-229ENST00000512418 C9orf139Q6ZV77 190 aa12.3□□□□□ -0.44
CCHCR1-229ENST00000512418 CELF2-AS1Q8N7Q2 184 aa12.3□□□□□ -0.44
CCHCR1-229ENST00000512418 SDR9C7Q8NEX9 313 aa12.3□□□□□ -0.44
CCHCR1-229ENST00000512418 OR8B3Q8NGG8 313 aa12.3□□□□□ -0.44
CCHCR1-229ENST00000512418 OR2AJ1Q8NGZ0 328 aa12.3□□□□□ -0.44
CCHCR1-229ENST00000512418 RAB40AQ8WXH6 277 aa12.3□□□□□ -0.44
CCHCR1-229ENST00000512418 ERGIC1Q969X5 290 aa12.3□□□□□ -0.44
CCHCR1-229ENST00000512418 SLC25A28Q96A46 364 aa12.3□□□□□ -0.44
CCHCR1-229ENST00000512418 MCUR1Q96AQ8 359 aa12.3□□□□□ -0.44
CCHCR1-229ENST00000512418 DACT3Q96B18 629 aaPredicted RBP12.3□□□□□ -0.44
CCHCR1-229ENST00000512418 UPRTQ96BW1 309 aa12.3□□□□□ -0.44
CCHCR1-229ENST00000512418 OR8B2Q96RD0 313 aa12.3□□□□□ -0.44
CCHCR1-229ENST00000512418 ELAC2Q9BQ52 826 aaKnown RBP12.3□□□□□ -0.44
CCHCR1-229ENST00000512418 ZNF747Q9BV97 191 aa12.3□□□□□ -0.44
CCHCR1-229ENST00000512418 PNRC2Q9NPJ4 139 aaKnown RBP12.3□□□□□ -0.44
CCHCR1-229ENST00000512418 OR6C68A6NDL8 312 aa12.29□□□□□ -0.44
CCHCR1-229ENST00000512418 CLDN34H7C241 214 aa12.29□□□□□ -0.44
CCHCR1-229ENST00000512418 LCATP04180 440 aa12.29□□□□□ -0.44
CCHCR1-229ENST00000512418 IGHV4-38-2P0DP08 117 aa12.29□□□□□ -0.44
CCHCR1-229ENST00000512418 GGT2P36268 569 aa12.29□□□□□ -0.44
CCHCR1-229ENST00000512418 CD200P41217 278 aa12.29□□□□□ -0.44
CCHCR1-229ENST00000512418 GSSP48637 474 aa12.29□□□□□ -0.44
CCHCR1-229ENST00000512418 PITPNBP48739 271 aa12.29□□□□□ -0.44
CCHCR1-229ENST00000512418 PRSS12P56730 875 aa12.29□□□□□ -0.44
CCHCR1-229ENST00000512418 DBPQ10586 325 aaPredicted RBP12.29□□□□□ -0.44
CCHCR1-229ENST00000512418 MAB21L1Q13394 359 aa12.29□□□□□ -0.44
CCHCR1-229ENST00000512418 PGAP1Q75T13 922 aa12.29□□□□□ -0.44
CCHCR1-229ENST00000512418 Q8TCH9 128 aa12.29□□□□□ -0.44
CCHCR1-229ENST00000512418 FN3KQ9H479 309 aa12.29□□□□□ -0.44
CCHCR1-229ENST00000512418 CLN8Q9UBY8 286 aa12.29□□□□□ -0.44
CCHCR1-229ENST00000512418 KCNG2Q9UJ96 466 aa12.29□□□□□ -0.44
CCHCR1-229ENST00000512418 TMCC3Q9ULS5 477 aa12.29□□□□□ -0.44
CCHCR1-229ENST00000512418 NOP16Q9Y3C1 178 aaKnown RBP12.29□□□□□ -0.44
CCHCR1-229ENST00000512418 DOCK11Q5JSL3 2073 aa12.28□□□□□ -0.44
CCHCR1-229ENST00000512418 TRAV40A0A0B4J280 105 aa12.28□□□□□ -0.44
CCHCR1-229ENST00000512418 M0R135 149 aa12.28□□□□□ -0.44
CCHCR1-229ENST00000512418 PHYHO14832 338 aa12.28□□□□□ -0.44
CCHCR1-229ENST00000512418 TMPRSS2O15393 492 aa12.28□□□□□ -0.44
CCHCR1-229ENST00000512418 PLATP00750 562 aa12.28□□□□□ -0.44
CCHCR1-229ENST00000512418 FABP3P05413 133 aa12.28□□□□□ -0.44
CCHCR1-229ENST00000512418 RRM2P31350 389 aa12.28□□□□□ -0.44
CCHCR1-229ENST00000512418 PMELP40967 661 aa12.28□□□□□ -0.44
CCHCR1-229ENST00000512418 TPTEP56180 551 aa12.28□□□□□ -0.44
CCHCR1-229ENST00000512418 TSPAN31Q12999 210 aa12.28□□□□□ -0.44
CCHCR1-229ENST00000512418 SAMD4BQ5PRF9 694 aaKnown RBP12.28□□□□□ -0.44
CCHCR1-229ENST00000512418 PRR31Q5SQ13 230 aa12.28□□□□□ -0.44
CCHCR1-229ENST00000512418 FAM201AQ5SY85 155 aa12.28□□□□□ -0.44
CCHCR1-229ENST00000512418 DCDC5Q6ZRR9 648 aa12.28□□□□□ -0.44
CCHCR1-229ENST00000512418 MRPL21Q7Z2W9 205 aaKnown RBP12.28□□□□□ -0.44
CCHCR1-229ENST00000512418 PGAM4Q8N0Y7 254 aa12.28□□□□□ -0.44
CCHCR1-229ENST00000512418 OR11L1Q8NGX0 322 aa12.28□□□□□ -0.44
CCHCR1-229ENST00000512418 GNPDA2Q8TDQ7 276 aa12.28□□□□□ -0.44
CCHCR1-229ENST00000512418 SLCO4A1Q96BD0 722 aa12.28□□□□□ -0.44
CCHCR1-229ENST00000512418 ZNF799Q96GE5 643 aa12.28□□□□□ -0.44
CCHCR1-229ENST00000512418 NSMCE2Q96MF7 247 aa12.28□□□□□ -0.44
CCHCR1-229ENST00000512418 SLC22A4Q9H015 551 aa12.28□□□□□ -0.44
CCHCR1-229ENST00000512418 NSRP1Q9H0G5 558 aaKnown RBP12.28□□□□□ -0.44
CCHCR1-229ENST00000512418 IL1RAPQ9NPH3 570 aa12.28□□□□□ -0.44
CCHCR1-229ENST00000512418 MRPL22Q9NWU5 206 aaKnown RBP12.28□□□□□ -0.44
CCHCR1-229ENST00000512418 IGHV3OR16-10A0A075B7F0 116 aa12.27□□□□□ -0.45
CCHCR1-229ENST00000512418 KIR2DS1A0A191URI9 304 aa12.27□□□□□ -0.45
CCHCR1-229ENST00000512418 ARPC2O15144 300 aa12.27□□□□□ -0.45
CCHCR1-229ENST00000512418 ZNF823P16415 610 aa12.27□□□□□ -0.45
CCHCR1-229ENST00000512418 RAD23AP54725 363 aa12.27□□□□□ -0.45
CCHCR1-229ENST00000512418 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.27□□□□□ -0.45
CCHCR1-229ENST00000512418 SLC9A3R2Q15599 337 aa12.27□□□□□ -0.45
CCHCR1-229ENST00000512418 CLEC12AQ5QGZ9 265 aa12.27□□□□□ -0.45
CCHCR1-229ENST00000512418 SLC35F1Q5T1Q4 408 aa12.27□□□□□ -0.45
CCHCR1-229ENST00000512418 RPL13AP3Q6NVV1 102 aa12.27□□□□□ -0.45
CCHCR1-229ENST00000512418 PGBD2Q6P3X8 592 aa12.27□□□□□ -0.45
CCHCR1-229ENST00000512418 NAA40Q86UY6 237 aa12.27□□□□□ -0.45
CCHCR1-229ENST00000512418 OR52L1Q8NGH7 329 aa12.27□□□□□ -0.45
CCHCR1-229ENST00000512418 SPRYD4Q8WW59 207 aaPredicted RBP12.27□□□□□ -0.45
CCHCR1-229ENST00000512418 SPTSSAQ969W0 71 aa12.27□□□□□ -0.45
CCHCR1-229ENST00000512418 MAP6Q96JE9 813 aa12.27□□□□□ -0.45
CCHCR1-229ENST00000512418 NUDT16L1Q9BRJ7 211 aaKnown RBP12.27□□□□□ -0.45
CCHCR1-229ENST00000512418 FAM107BQ9H098 131 aa12.27□□□□□ -0.45
CCHCR1-229ENST00000512418 CD300AQ9UGN4 299 aa12.27□□□□□ -0.45
CCHCR1-229ENST00000512418 SNX3O60493 162 aa12.26□□□□□ -0.45
CCHCR1-229ENST00000512418 FAM20BO75063 409 aa12.26□□□□□ -0.45
CCHCR1-229ENST00000512418 OTX1P32242 354 aaPredicted RBP12.26□□□□□ -0.45
CCHCR1-229ENST00000512418 PSMB10P40306 273 aa12.26□□□□□ -0.45
CCHCR1-229ENST00000512418 IL13RA1P78552 427 aa12.26□□□□□ -0.45
CCHCR1-229ENST00000512418 OR8G1Q15617 311 aa12.26□□□□□ -0.45
CCHCR1-229ENST00000512418 MPPED2Q15777 294 aa12.26□□□□□ -0.45
CCHCR1-229ENST00000512418 KCNJ8Q15842 424 aa12.26□□□□□ -0.45
CCHCR1-229ENST00000512418 PRAMEF6Q5VXH4 476 aa12.26□□□□□ -0.45
CCHCR1-229ENST00000512418 WDR25Q64LD2 544 aaPredicted RBP12.26□□□□□ -0.45
CCHCR1-229ENST00000512418 ZDHHC21Q8IVQ6 265 aa12.26□□□□□ -0.45
CCHCR1-229ENST00000512418 FITM2Q8N6M3 262 aa12.26□□□□□ -0.45
CCHCR1-229ENST00000512418 PROKR2Q8NFJ6 384 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms