RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 ETFDHQ16134 617 aa9.13□□□□□ -0.95
PDLIM5-217ENST00000512274 HIST2H3PS2Q5TEC6 136 aa9.13□□□□□ -0.95
PDLIM5-217ENST00000512274 ZNF544Q6NX49 715 aa9.13□□□□□ -0.95
PDLIM5-217ENST00000512274 LYPD4Q6UWN0 246 aa9.13□□□□□ -0.95
PDLIM5-217ENST00000512274 TMEM91Q6ZNR0 172 aa9.13□□□□□ -0.95
PDLIM5-217ENST00000512274 HIST2H3AQ71DI3 136 aa9.13□□□□□ -0.95
PDLIM5-217ENST00000512274 SYT9Q86SS6 491 aa9.13□□□□□ -0.95
PDLIM5-217ENST00000512274 CROCCP3Q8IVE0 287 aa9.13□□□□□ -0.95
PDLIM5-217ENST00000512274 UBQLNLQ8IYU4 475 aa9.13□□□□□ -0.95
PDLIM5-217ENST00000512274 RFLNBQ8N5W9 214 aa9.13□□□□□ -0.95
PDLIM5-217ENST00000512274 TBC1D15Q8TC07 691 aa9.13□□□□□ -0.95
PDLIM5-217ENST00000512274 SLC25A46Q96AG3 418 aa9.13□□□□□ -0.95
PDLIM5-217ENST00000512274 ZNF385AQ96PM9 386 aaKnown RBP9.13□□□□□ -0.95
PDLIM5-217ENST00000512274 TBX5Q99593 518 aa9.13□□□□□ -0.95
PDLIM5-217ENST00000512274 TM9SF2Q99805 663 aa9.13□□□□□ -0.95
PDLIM5-217ENST00000512274 DCUN1D5Q9BTE7 237 aa9.13□□□□□ -0.95
PDLIM5-217ENST00000512274 ABHD6Q9BV23 337 aa9.13□□□□□ -0.95
PDLIM5-217ENST00000512274 MROQ9BYG7 248 aa9.13□□□□□ -0.95
PDLIM5-217ENST00000512274 NELFAQ9H3P2 528 aa9.13□□□□□ -0.95
PDLIM5-217ENST00000512274 PALMDQ9NP74 551 aa9.13□□□□□ -0.95
PDLIM5-217ENST00000512274 POLE4Q9NR33 117 aa9.13□□□□□ -0.95
PDLIM5-217ENST00000512274 DDX28Q9NUL7 540 aaKnown RBP9.13□□□□□ -0.95
PDLIM5-217ENST00000512274 ACOXLQ9NUZ1 547 aa9.13□□□□□ -0.95
PDLIM5-217ENST00000512274 LPAR3Q9UBY5 353 aa9.13□□□□□ -0.95
PDLIM5-217ENST00000512274 KLHDC2Q9Y2U9 406 aa9.13□□□□□ -0.95
PDLIM5-217ENST00000512274 SIRT4Q9Y6E7 314 aaPredicted RBP9.13□□□□□ -0.95
PDLIM5-217ENST00000512274 TRBV5-5A0A0J9YX44 114 aa9.12□□□□□ -0.95
PDLIM5-217ENST00000512274 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.12□□□□□ -0.95
PDLIM5-217ENST00000512274 TVP23AA6NH52 213 aa9.12□□□□□ -0.95
PDLIM5-217ENST00000512274 OR4C45A6NMZ5 311 aa9.12□□□□□ -0.95
PDLIM5-217ENST00000512274 E9PI62 339 aa9.12□□□□□ -0.95
PDLIM5-217ENST00000512274 DHHO43323 396 aa9.12□□□□□ -0.95
PDLIM5-217ENST00000512274 ARL6IP5O75915 188 aa9.12□□□□□ -0.95
PDLIM5-217ENST00000512274 SYNGR4O95473 234 aa9.12□□□□□ -0.95
PDLIM5-217ENST00000512274 ISG15P05161 165 aa9.12□□□□□ -0.95
PDLIM5-217ENST00000512274 QDPRP09417 244 aa9.12□□□□□ -0.95
PDLIM5-217ENST00000512274 UCHL1P09936 223 aa9.12□□□□□ -0.95
PDLIM5-217ENST00000512274 MAPK3P27361 379 aaPredicted RBP9.12□□□□□ -0.95
PDLIM5-217ENST00000512274 CCKARP32238 428 aa9.12□□□□□ -0.95
PDLIM5-217ENST00000512274 THBS2P35442 1172 aa9.12□□□□□ -0.95
PDLIM5-217ENST00000512274 SOX6P35712 828 aa9.12□□□□□ -0.95
PDLIM5-217ENST00000512274 OPRL1P41146 370 aa9.12□□□□□ -0.95
PDLIM5-217ENST00000512274 ETV6P41212 452 aa9.12□□□□□ -0.95
PDLIM5-217ENST00000512274 GDI2P50395 445 aaKnown RBP9.12□□□□□ -0.95
PDLIM5-217ENST00000512274 RPS11P62280 158 aaKnown RBP eCLIP9.12□□□□□ -0.95
PDLIM5-217ENST00000512274 FMODQ06828 376 aa9.12□□□□□ -0.95
PDLIM5-217ENST00000512274 CAMK2DQ13557 499 aa9.12□□□□□ -0.95
PDLIM5-217ENST00000512274 ALKBH1Q13686 389 aaKnown RBP9.12□□□□□ -0.95
PDLIM5-217ENST00000512274 ZNF404Q494X3 552 aa9.12□□□□□ -0.95
PDLIM5-217ENST00000512274 TP53I3Q53FA7 332 aa9.12□□□□□ -0.95
PDLIM5-217ENST00000512274 FAM27BQ5VT28 67 aa9.12□□□□□ -0.95
PDLIM5-217ENST00000512274 VWA1Q6PCB0 445 aa9.12□□□□□ -0.95
PDLIM5-217ENST00000512274 ZNF611Q8N823 705 aa9.12□□□□□ -0.95
PDLIM5-217ENST00000512274 SYT14Q8NB59 555 aa9.12□□□□□ -0.95
PDLIM5-217ENST00000512274 OR10H5Q8NGA6 315 aa9.12□□□□□ -0.95
PDLIM5-217ENST00000512274 OR2G2Q8NGZ5 317 aa9.12□□□□□ -0.95
PDLIM5-217ENST00000512274 S100ZQ8WXG8 99 aa9.12□□□□□ -0.95
PDLIM5-217ENST00000512274 C11orf40Q8WZ69 217 aa9.12□□□□□ -0.95
PDLIM5-217ENST00000512274 GHSRQ92847 366 aa9.12□□□□□ -0.95
PDLIM5-217ENST00000512274 ITFG2Q969R8 447 aa9.12□□□□□ -0.95
PDLIM5-217ENST00000512274 C1orf159Q96HA4 380 aa9.12□□□□□ -0.95
PDLIM5-217ENST00000512274 MAP6Q96JE9 813 aa9.12□□□□□ -0.95
PDLIM5-217ENST00000512274 C4orf45Q96LM5 186 aa9.12□□□□□ -0.95
PDLIM5-217ENST00000512274 EMC6Q9BV81 110 aa9.12□□□□□ -0.95
PDLIM5-217ENST00000512274 CDADC1Q9BWV3 514 aa9.12□□□□□ -0.95
PDLIM5-217ENST00000512274 OPN3Q9H1Y3 402 aaPredicted RBP9.12□□□□□ -0.95
PDLIM5-217ENST00000512274 C1orf198Q9H425 327 aa9.12□□□□□ -0.95
PDLIM5-217ENST00000512274 ZCCHC4Q9H5U6 513 aa9.12□□□□□ -0.95
PDLIM5-217ENST00000512274 MOB1AQ9H8S9 216 aa9.12□□□□□ -0.95
PDLIM5-217ENST00000512274 B3GAT2Q9NPZ5 323 aa9.12□□□□□ -0.95
PDLIM5-217ENST00000512274 ATPIF1Q9UII2 106 aa9.12□□□□□ -0.95
PDLIM5-217ENST00000512274 GNG8Q9UK08 70 aa9.12□□□□□ -0.95
PDLIM5-217ENST00000512274 ZNF281Q9Y2X9 895 aa9.12□□□□□ -0.95
PDLIM5-217ENST00000512274 PMF1-BGLAPU3KQ54 211 aa9.12□□□□□ -0.95
PDLIM5-217ENST00000512274 TRBV2A0A0J9YWF9 115 aa9.11□□□□□ -0.95
PDLIM5-217ENST00000512274 LOC100506127A0A0U1RQW1 187 aa9.11□□□□□ -0.95
PDLIM5-217ENST00000512274 MSTNO14793 375 aa9.11□□□□□ -0.95
PDLIM5-217ENST00000512274 TNFSF13O75888 250 aa9.11□□□□□ -0.95
PDLIM5-217ENST00000512274 IGHV4-39P01824 125 aa9.11□□□□□ -0.95
PDLIM5-217ENST00000512274 HLA-DQA2P01906 255 aa9.11□□□□□ -0.95
PDLIM5-217ENST00000512274 PSKH1P11801 424 aa9.11□□□□□ -0.95
PDLIM5-217ENST00000512274 ZNF16P17020 682 aaPredicted RBP9.11□□□□□ -0.95
PDLIM5-217ENST00000512274 MSR1P21757 451 aa9.11□□□□□ -0.95
PDLIM5-217ENST00000512274 GUCA1AP43080 201 aaPredicted RBP9.11□□□□□ -0.95
PDLIM5-217ENST00000512274 RORCP51449 518 aa9.11□□□□□ -0.95
PDLIM5-217ENST00000512274 ZNF84P51523 738 aa9.11□□□□□ -0.95
PDLIM5-217ENST00000512274 RIDAP52758 137 aaKnown RBP9.11□□□□□ -0.95
PDLIM5-217ENST00000512274 HCCSP53701 268 aa9.11□□□□□ -0.95
PDLIM5-217ENST00000512274 FAPQ12884 760 aa9.11□□□□□ -0.95
PDLIM5-217ENST00000512274 GUSBP1Q15486 140 aa9.11□□□□□ -0.95
PDLIM5-217ENST00000512274 MEP1BQ16820 701 aa9.11□□□□□ -0.95
PDLIM5-217ENST00000512274 TMEM249Q2WGJ8 235 aa9.11□□□□□ -0.95
PDLIM5-217ENST00000512274 ZNF474Q6S9Z5 364 aaPredicted RBP9.11□□□□□ -0.95
PDLIM5-217ENST00000512274 GPR137CQ8N3F9 429 aa9.11□□□□□ -0.95
PDLIM5-217ENST00000512274 CNEP1R1Q8N9A8 125 aa9.11□□□□□ -0.95
PDLIM5-217ENST00000512274 OR6Q1Q8NGQ2 317 aa9.11□□□□□ -0.95
PDLIM5-217ENST00000512274 OR6N1Q8NGY5 312 aa9.11□□□□□ -0.95
PDLIM5-217ENST00000512274 ABHD4Q8TB40 342 aa9.11□□□□□ -0.95
PDLIM5-217ENST00000512274 AP3S1Q92572 193 aa9.11□□□□□ -0.95
PDLIM5-217ENST00000512274 AKAP1Q92667 903 aaKnown RBP eCLIP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms