RNA–Protein interactions for RNA: ENST00000512027.1

DDX41-213, Transcript of DEAD-box helicase 41, human

TSL 4

Gene DDX41, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX41-213	ENST00000512027	SLAMF6	Q96DU3	332 aa		13.94	□□□□□ -0.18
DDX41-213	ENST00000512027	ZNF799	Q96GE5	643 aa		13.94	□□□□□ -0.18
DDX41-213	ENST00000512027	OR2V2	Q96R30	315 aa		13.94	□□□□□ -0.18
DDX41-213	ENST00000512027	COPS4	Q9BT78	406 aa		13.94	□□□□□ -0.18
DDX41-213	ENST00000512027	OR51V1	Q9H2C8	321 aa		13.94	□□□□□ -0.18
DDX41-213	ENST00000512027	YY1AP1	Q9H869	796 aa		13.94	□□□□□ -0.18
DDX41-213	ENST00000512027	CENPM	Q9NSP4	180 aa		13.94	□□□□□ -0.18
DDX41-213	ENST00000512027	DDX28	Q9NUL7	540 aa	Known RBP	13.94	□□□□□ -0.18
DDX41-213	ENST00000512027	N6AMT1	Q9Y5N5	214 aa		13.94	□□□□□ -0.18
DDX41-213	ENST00000512027		B4DSR2	109 aa		13.93	□□□□□ -0.18
DDX41-213	ENST00000512027	DEAF1	O75398	565 aa	Predicted RBP	13.93	□□□□□ -0.18
DDX41-213	ENST00000512027	HLA-DPB1	P04440	258 aa		13.93	□□□□□ -0.18
DDX41-213	ENST00000512027	OSM	P13725	252 aa		13.93	□□□□□ -0.18
DDX41-213	ENST00000512027	SELE	P16581	610 aa		13.93	□□□□□ -0.18
DDX41-213	ENST00000512027	SRSF2	Q01130	221 aa	Known RBP	13.93	□□□□□ -0.18
DDX41-213	ENST00000512027	PCK2	Q16822	640 aa		13.93	□□□□□ -0.18
DDX41-213	ENST00000512027	PLBD1	Q6P4A8	553 aa		13.93	□□□□□ -0.18
DDX41-213	ENST00000512027	DPY19L4	Q7Z388	723 aa		13.93	□□□□□ -0.18
DDX41-213	ENST00000512027	BBS1	Q8NFJ9	593 aa		13.93	□□□□□ -0.18
DDX41-213	ENST00000512027	OR6N2	Q8NGY6	317 aa		13.93	□□□□□ -0.18
DDX41-213	ENST00000512027	ST7L	Q8TDW4	575 aa		13.93	□□□□□ -0.18
DDX41-213	ENST00000512027	RAB1C	Q92928	201 aa		13.93	□□□□□ -0.18
DDX41-213	ENST00000512027	UTP4	Q969X6	686 aa	Known RBP	13.93	□□□□□ -0.18
DDX41-213	ENST00000512027	ZMYND19	Q96E35	227 aa	Predicted RBP	13.93	□□□□□ -0.18
DDX41-213	ENST00000512027	TIMD4	Q96H15	378 aa		13.93	□□□□□ -0.18
DDX41-213	ENST00000512027	AMELY	Q99218	206 aa		13.93	□□□□□ -0.18
DDX41-213	ENST00000512027	ZNF556	Q9HAH1	456 aa		13.93	□□□□□ -0.18
DDX41-213	ENST00000512027	UBAP1	Q9NZ09	502 aa		13.93	□□□□□ -0.18
DDX41-213	ENST00000512027	LPAR3	Q9UBY5	353 aa		13.93	□□□□□ -0.18
DDX41-213	ENST00000512027	TMEFF2	Q9UIK5	374 aa	Predicted RBP	13.93	□□□□□ -0.18
DDX41-213	ENST00000512027	IQCF6	A8MYZ5	107 aa		13.92	□□□□□ -0.18
DDX41-213	ENST00000512027		F5H5P2	479 aa		13.92	□□□□□ -0.18
DDX41-213	ENST00000512027	SURF4	O15260	269 aa		13.92	□□□□□ -0.18
DDX41-213	ENST00000512027	IGHV2-5	P01817	119 aa		13.92	□□□□□ -0.18
DDX41-213	ENST00000512027	MSMB	P08118	114 aa		13.92	□□□□□ -0.18
DDX41-213	ENST00000512027	ANXA8	P13928	327 aa		13.92	□□□□□ -0.18
DDX41-213	ENST00000512027	SRD5A1	P18405	259 aa		13.92	□□□□□ -0.18
DDX41-213	ENST00000512027	TNFSF4	P23510	183 aa		13.92	□□□□□ -0.18
DDX41-213	ENST00000512027	OTX1	P32242	354 aa	Predicted RBP	13.92	□□□□□ -0.18
DDX41-213	ENST00000512027	DAP	P51397	102 aa		13.92	□□□□□ -0.18
DDX41-213	ENST00000512027	DVL1P1	P54792	670 aa	Predicted RBP	13.92	□□□□□ -0.18
DDX41-213	ENST00000512027	CDK5	Q00535	292 aa		13.92	□□□□□ -0.18
DDX41-213	ENST00000512027	EIF2B1	Q14232	305 aa	Known RBP	13.92	□□□□□ -0.18
DDX41-213	ENST00000512027	C1orf146	Q5VVC0	180 aa		13.92	□□□□□ -0.18
DDX41-213	ENST00000512027	SHQ1	Q6PI26	577 aa	Known RBP	13.92	□□□□□ -0.18
DDX41-213	ENST00000512027	GLCCI1	Q86VQ1	547 aa		13.92	□□□□□ -0.18
DDX41-213	ENST00000512027	ZNF283	Q8N7M2	679 aa		13.92	□□□□□ -0.18
DDX41-213	ENST00000512027	ZNF420	Q8TAQ5	688 aa	Predicted RBP	13.92	□□□□□ -0.18
DDX41-213	ENST00000512027	SPTSSA	Q969W0	71 aa		13.92	□□□□□ -0.18
DDX41-213	ENST00000512027	ZNF582	Q96NG8	517 aa	Predicted RBP	13.92	□□□□□ -0.18
DDX41-213	ENST00000512027	INTS14	Q96SY0	518 aa		13.92	□□□□□ -0.18
DDX41-213	ENST00000512027	GAL3ST1	Q99999	423 aa		13.92	□□□□□ -0.18
DDX41-213	ENST00000512027	TMEM106B	Q9NUM4	274 aa		13.92	□□□□□ -0.18
DDX41-213	ENST00000512027	HIF1AN	Q9NWT6	349 aa		13.92	□□□□□ -0.18
DDX41-213	ENST00000512027	KIF17	Q9P2E2	1029 aa		13.92	□□□□□ -0.18
DDX41-213	ENST00000512027	IL19	Q9UHD0	177 aa		13.92	□□□□□ -0.18
DDX41-213	ENST00000512027	ZNF878	C9JN71	531 aa		13.91	□□□□□ -0.18
DDX41-213	ENST00000512027	PRR23D1	E9PI22	279 aa	Predicted RBP	13.91	□□□□□ -0.18
DDX41-213	ENST00000512027	SELENOF	O60613	162 aa		13.91	□□□□□ -0.18
DDX41-213	ENST00000512027	MITF	O75030	526 aa	Predicted RBP	13.91	□□□□□ -0.18
DDX41-213	ENST00000512027	GLCE	O94923	617 aa		13.91	□□□□□ -0.18
DDX41-213	ENST00000512027	ZNF205	O95201	554 aa		13.91	□□□□□ -0.18
DDX41-213	ENST00000512027	PRR23D2	P0DMB1	279 aa	Predicted RBP	13.91	□□□□□ -0.18
DDX41-213	ENST00000512027	HOXB6	P17509	224 aa	Known RBP	13.91	□□□□□ -0.18
DDX41-213	ENST00000512027	GSTT1	P30711	240 aa		13.91	□□□□□ -0.18
DDX41-213	ENST00000512027	ZNF92	Q03936	586 aa		13.91	□□□□□ -0.18
DDX41-213	ENST00000512027	MALL	Q13021	153 aa		13.91	□□□□□ -0.18
DDX41-213	ENST00000512027	TAF13	Q15543	124 aa		13.91	□□□□□ -0.18
DDX41-213	ENST00000512027	KLHL12	Q53G59	568 aa		13.91	□□□□□ -0.18
DDX41-213	ENST00000512027	GLYATL3	Q5SZD4	288 aa		13.91	□□□□□ -0.18
DDX41-213	ENST00000512027	PGAP1	Q75T13	922 aa		13.91	□□□□□ -0.18
DDX41-213	ENST00000512027	CPO	Q8IVL8	374 aa		13.91	□□□□□ -0.18
DDX41-213	ENST00000512027	DVL3	Q92997	716 aa	Predicted RBP	13.91	□□□□□ -0.18
DDX41-213	ENST00000512027	TMEM186	Q96B77	213 aa		13.91	□□□□□ -0.18
DDX41-213	ENST00000512027	MEGF10	Q96KG7	1140 aa		13.91	□□□□□ -0.18
DDX41-213	ENST00000512027	SIGLEC11	Q96RL6	698 aa		13.91	□□□□□ -0.18
DDX41-213	ENST00000512027	SLC30A2	Q9BRI3	323 aa		13.91	□□□□□ -0.18
DDX41-213	ENST00000512027	DNAJC27	Q9NZQ0	273 aa		13.91	□□□□□ -0.18
DDX41-213	ENST00000512027	PPP1R3C	Q9UQK1	317 aa		13.91	□□□□□ -0.18
DDX41-213	ENST00000512027	NPTN	Q9Y639	398 aa		13.91	□□□□□ -0.18
DDX41-213	ENST00000512027		M0R129	80 aa		13.9	□□□□□ -0.18
DDX41-213	ENST00000512027	IGHV2-70	P01814	119 aa		13.9	□□□□□ -0.18
DDX41-213	ENST00000512027	SBK2	P0C263	348 aa		13.9	□□□□□ -0.18
DDX41-213	ENST00000512027	TNFRSF1A	P19438	455 aa		13.9	□□□□□ -0.18
DDX41-213	ENST00000512027	HNF1A	P20823	631 aa		13.9	□□□□□ -0.18
DDX41-213	ENST00000512027	PAICS	P22234	425 aa	Known RBP	13.9	□□□□□ -0.18
DDX41-213	ENST00000512027	NAA10	P41227	235 aa	Predicted RBP	13.9	□□□□□ -0.18
DDX41-213	ENST00000512027	RASSF2	P50749	326 aa		13.9	□□□□□ -0.18
DDX41-213	ENST00000512027	MMP16	P51512	607 aa		13.9	□□□□□ -0.18
DDX41-213	ENST00000512027	SLC3A1	Q07837	685 aa		13.9	□□□□□ -0.18
DDX41-213	ENST00000512027	TEX30	Q5JUR7	227 aa		13.9	□□□□□ -0.18
DDX41-213	ENST00000512027	FAHD1	Q6P587	224 aa		13.9	□□□□□ -0.18
DDX41-213	ENST00000512027	MRPL21	Q7Z2W9	205 aa	Known RBP	13.9	□□□□□ -0.18
DDX41-213	ENST00000512027	AMIGO2	Q86SJ2	522 aa		13.9	□□□□□ -0.18
DDX41-213	ENST00000512027	TIGD4	Q8IY51	512 aa		13.9	□□□□□ -0.18
DDX41-213	ENST00000512027	OR13G1	Q8NGZ3	307 aa		13.9	□□□□□ -0.18
DDX41-213	ENST00000512027	OR51F2	Q8NH61	342 aa		13.9	□□□□□ -0.18
DDX41-213	ENST00000512027	KCNJ15	Q99712	375 aa		13.9	□□□□□ -0.18
DDX41-213	ENST00000512027	ABHD6	Q9BV23	337 aa		13.9	□□□□□ -0.18
DDX41-213	ENST00000512027	MARCH7	Q9H992	704 aa		13.9	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms