RNA–Protein interactions for RNA: ENST00000511001.2

CHFR-208, Transcript of checkpoint with forkhead and ring finger domains, human

TSL 5

Gene CHFR, Length 892 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHFR-208	ENST00000511001	OR2T4	Q8NH00	348 aa		10.14	□□□□□ -0.79
CHFR-208	ENST00000511001	CCDC124	Q96CT7	223 aa	Known RBP	10.14	□□□□□ -0.79
CHFR-208	ENST00000511001	ASB9	Q96DX5	294 aa		10.14	□□□□□ -0.79
CHFR-208	ENST00000511001	FAHD2A	Q96GK7	314 aa		10.14	□□□□□ -0.79
CHFR-208	ENST00000511001	NIPSNAP1	Q9BPW8	284 aa		10.14	□□□□□ -0.79
CHFR-208	ENST00000511001	NMNAT2	Q9BZQ4	307 aa		10.14	□□□□□ -0.79
CHFR-208	ENST00000511001	REEP1	Q9H902	201 aa		10.14	□□□□□ -0.79
CHFR-208	ENST00000511001	PATZ1	Q9HBE1	687 aa	Known RBP	10.14	□□□□□ -0.79
CHFR-208	ENST00000511001	GCM1	Q9NP62	436 aa		10.14	□□□□□ -0.79
CHFR-208	ENST00000511001	TBC1D23	Q9NUY8	699 aa		10.14	□□□□□ -0.79
CHFR-208	ENST00000511001	ARMC1	Q9NVT9	282 aa		10.14	□□□□□ -0.79
CHFR-208	ENST00000511001	UBAP1	Q9NZ09	502 aa		10.14	□□□□□ -0.79
CHFR-208	ENST00000511001	METRN	Q9UJH8	293 aa		10.14	□□□□□ -0.79
CHFR-208	ENST00000511001	PPP1R3C	Q9UQK1	317 aa		10.14	□□□□□ -0.79
CHFR-208	ENST00000511001	COMMD3-BMI1	R4GMX3	469 aa		10.14	□□□□□ -0.79
CHFR-208	ENST00000511001	C5orf63	A6NC05	138 aa		10.13	□□□□□ -0.79
CHFR-208	ENST00000511001	TMEM178B	H3BS89	294 aa		10.13	□□□□□ -0.79
CHFR-208	ENST00000511001	HAX1	O00165	279 aa		10.13	□□□□□ -0.79
CHFR-208	ENST00000511001	SURF4	O15260	269 aa		10.13	□□□□□ -0.79
CHFR-208	ENST00000511001	GYPB	P06028	91 aa		10.13	□□□□□ -0.79
CHFR-208	ENST00000511001	RAP2A	P10114	183 aa		10.13	□□□□□ -0.79
CHFR-208	ENST00000511001	CLU	P10909	449 aa		10.13	□□□□□ -0.79
CHFR-208	ENST00000511001	ZNF823	P16415	610 aa		10.13	□□□□□ -0.79
CHFR-208	ENST00000511001	OTX1	P32242	354 aa	Predicted RBP	10.13	□□□□□ -0.79
CHFR-208	ENST00000511001	PMEL	P40967	661 aa		10.13	□□□□□ -0.79
CHFR-208	ENST00000511001	SLC25A1	P53007	311 aa		10.13	□□□□□ -0.79
CHFR-208	ENST00000511001	SEC61A1	P61619	476 aa	Known RBP	10.13	□□□□□ -0.79
CHFR-208	ENST00000511001	BTG1	P62324	171 aa		10.13	□□□□□ -0.79
CHFR-208	ENST00000511001	LCN2	P80188	198 aa		10.13	□□□□□ -0.79
CHFR-208	ENST00000511001	GK2	Q14410	553 aa	Predicted RBP	10.13	□□□□□ -0.79
CHFR-208	ENST00000511001	ZMYND11	Q15326	602 aa		10.13	□□□□□ -0.79
CHFR-208	ENST00000511001	PCK2	Q16822	640 aa		10.13	□□□□□ -0.79
CHFR-208	ENST00000511001	TMEM155	Q4W5P6	130 aa		10.13	□□□□□ -0.79
CHFR-208	ENST00000511001	LIPN	Q5VXI9	398 aa		10.13	□□□□□ -0.79
CHFR-208	ENST00000511001	CD300LD	Q6UXZ3	194 aa		10.13	□□□□□ -0.79
CHFR-208	ENST00000511001	TMEM179B	Q7Z7N9	219 aa		10.13	□□□□□ -0.79
CHFR-208	ENST00000511001	ZNF511	Q8NB15	262 aa		10.13	□□□□□ -0.79
CHFR-208	ENST00000511001	PROKR2	Q8NFJ6	384 aa		10.13	□□□□□ -0.79
CHFR-208	ENST00000511001	SEMA6D	Q8NFY4	1073 aa		10.13	□□□□□ -0.79
CHFR-208	ENST00000511001	OR10G2	Q8NGC3	310 aa		10.13	□□□□□ -0.79
CHFR-208	ENST00000511001	ZNF420	Q8TAQ5	688 aa	Predicted RBP	10.13	□□□□□ -0.79
CHFR-208	ENST00000511001	ZNF582	Q96NG8	517 aa	Predicted RBP	10.13	□□□□□ -0.79
CHFR-208	ENST00000511001	THTPA	Q9BU02	230 aa		10.13	□□□□□ -0.79
CHFR-208	ENST00000511001	CHID1	Q9BWS9	393 aa		10.13	□□□□□ -0.79
CHFR-208	ENST00000511001	CDADC1	Q9BWV3	514 aa		10.13	□□□□□ -0.79
CHFR-208	ENST00000511001	MMADHC	Q9H3L0	296 aa	Predicted RBP	10.13	□□□□□ -0.79
CHFR-208	ENST00000511001	DDX28	Q9NUL7	540 aa	Known RBP	10.13	□□□□□ -0.79
CHFR-208	ENST00000511001	OPN4	Q9UHM6	478 aa		10.13	□□□□□ -0.79
CHFR-208	ENST00000511001	BAIAP2	Q9UQB8	552 aa		10.13	□□□□□ -0.79
CHFR-208	ENST00000511001		A0A0G2JMP0	313 aa		10.12	□□□□□ -0.79
CHFR-208	ENST00000511001		A0A0X1KG70	313 aa		10.12	□□□□□ -0.79
CHFR-208	ENST00000511001		F5H5P2	479 aa		10.12	□□□□□ -0.79
CHFR-208	ENST00000511001		J3QLI3	93 aa		10.12	□□□□□ -0.79
CHFR-208	ENST00000511001		M0R135	149 aa		10.12	□□□□□ -0.79
CHFR-208	ENST00000511001	VENTX	O95231	258 aa		10.12	□□□□□ -0.79
CHFR-208	ENST00000511001	FSHB	P01225	129 aa		10.12	□□□□□ -0.79
CHFR-208	ENST00000511001	LCAT	P04180	440 aa		10.12	□□□□□ -0.79
CHFR-208	ENST00000511001	SELE	P16581	610 aa		10.12	□□□□□ -0.79
CHFR-208	ENST00000511001	SPI1	P17947	270 aa		10.12	□□□□□ -0.79
CHFR-208	ENST00000511001	TPTE	P56180	551 aa		10.12	□□□□□ -0.79
CHFR-208	ENST00000511001	SNAI3	Q3KNW1	292 aa		10.12	□□□□□ -0.79
CHFR-208	ENST00000511001	LINC01590	Q5TEZ4	76 aa		10.12	□□□□□ -0.79
CHFR-208	ENST00000511001	DCAF12L2	Q5VW00	463 aa		10.12	□□□□□ -0.79
CHFR-208	ENST00000511001	SLC27A4	Q6P1M0	643 aa		10.12	□□□□□ -0.79
CHFR-208	ENST00000511001	C1QL2	Q7Z5L3	287 aa		10.12	□□□□□ -0.79
CHFR-208	ENST00000511001	BHLHE23	Q8NDY6	225 aa		10.12	□□□□□ -0.79
CHFR-208	ENST00000511001	OR2T33	Q8NG76	320 aa		10.12	□□□□□ -0.79
CHFR-208	ENST00000511001	OR4M2	Q8NGB6	313 aa		10.12	□□□□□ -0.79
CHFR-208	ENST00000511001	CANT1	Q8WVQ1	401 aa		10.12	□□□□□ -0.79
CHFR-208	ENST00000511001	POP5	Q969H6	163 aa	Known RBP	10.12	□□□□□ -0.79
CHFR-208	ENST00000511001	ZNF799	Q96GE5	643 aa		10.12	□□□□□ -0.79
CHFR-208	ENST00000511001	HCAR1	Q9BXC0	346 aa		10.12	□□□□□ -0.79
CHFR-208	ENST00000511001	MMP26	Q9NRE1	261 aa		10.12	□□□□□ -0.79
CHFR-208	ENST00000511001	POLR3K	Q9Y2Y1	108 aa	Predicted RBP	10.12	□□□□□ -0.79
CHFR-208	ENST00000511001	PPIAL4E	A0A075B759	164 aa		10.11	□□□□□ -0.79
CHFR-208	ENST00000511001	PPIAL4C	A0A0B4J2A2	164 aa		10.11	□□□□□ -0.79
CHFR-208	ENST00000511001	IGHV3-64D	A0A0J9YX35	117 aa		10.11	□□□□□ -0.79
CHFR-208	ENST00000511001	ARRDC5	A6NEK1	342 aa		10.11	□□□□□ -0.79
CHFR-208	ENST00000511001	AQP12B	A6NM10	295 aa		10.11	□□□□□ -0.79
CHFR-208	ENST00000511001	CEACAM18	A8MTB9	384 aa		10.11	□□□□□ -0.79
CHFR-208	ENST00000511001		A8MXK9	166 aa		10.11	□□□□□ -0.79
CHFR-208	ENST00000511001	PPIAL4D	F5H284	164 aa		10.11	□□□□□ -0.79
CHFR-208	ENST00000511001	TRAPPC2L	H3BP13	241 aa		10.11	□□□□□ -0.79
CHFR-208	ENST00000511001	FOXH1	O75593	365 aa		10.11	□□□□□ -0.79
CHFR-208	ENST00000511001	ZNF205	O95201	554 aa		10.11	□□□□□ -0.79
CHFR-208	ENST00000511001	CYB5R3	P00387	301 aa	Predicted RBP	10.11	□□□□□ -0.79
CHFR-208	ENST00000511001	CST1	P01037	141 aa		10.11	□□□□□ -0.79
CHFR-208	ENST00000511001	HLA-DPB1	P04440	258 aa		10.11	□□□□□ -0.79
CHFR-208	ENST00000511001	PPIAL4F	P0DN26	164 aa		10.11	□□□□□ -0.79
CHFR-208	ENST00000511001	ADRA2C	P18825	462 aa		10.11	□□□□□ -0.79
CHFR-208	ENST00000511001	EPHA1	P21709	976 aa		10.11	□□□□□ -0.79
CHFR-208	ENST00000511001	FMO3	P31513	532 aa		10.11	□□□□□ -0.79
CHFR-208	ENST00000511001	SLC6A9	P48067	706 aa		10.11	□□□□□ -0.79
CHFR-208	ENST00000511001	SRP9	P49458	86 aa	Known RBP	10.11	□□□□□ -0.79
CHFR-208	ENST00000511001	ENTPD1	P49961	510 aa		10.11	□□□□□ -0.79
CHFR-208	ENST00000511001	RAD23A	P54725	363 aa		10.11	□□□□□ -0.79
CHFR-208	ENST00000511001	ZNF92	Q03936	586 aa		10.11	□□□□□ -0.79
CHFR-208	ENST00000511001	MAB21L1	Q13394	359 aa		10.11	□□□□□ -0.79
CHFR-208	ENST00000511001	GK3P	Q14409	553 aa		10.11	□□□□□ -0.79
CHFR-208	ENST00000511001	ZNF181	Q2M3W8	571 aa		10.11	□□□□□ -0.79

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