RNA–Protein interactions for RNA: ENST00000509297.5

SMAD5-205, Transcript of SMAD family member 5, humanhuman

TSL 1 (best)

Gene SMAD5, Length 854 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-205ENST00000509297 CFAP77Q6ZQR2 320 aa12.88□□□□□ -0.35
SMAD5-205ENST00000509297 DCDC5Q6ZRR9 648 aa12.88□□□□□ -0.35
SMAD5-205ENST00000509297 PARP8Q8N3A8 854 aa12.88□□□□□ -0.35
SMAD5-205ENST00000509297 PITX2Q99697 317 aa12.88□□□□□ -0.35
SMAD5-205ENST00000509297 MS4A7Q9GZW8 240 aaPredicted RBP12.88□□□□□ -0.35
SMAD5-205ENST00000509297 SLC22A4Q9H015 551 aa12.88□□□□□ -0.35
SMAD5-205ENST00000509297 SRA1Q9HD15 236 aaKnown RBP12.88□□□□□ -0.35
SMAD5-205ENST00000509297 PNRC2Q9NPJ4 139 aaKnown RBP12.88□□□□□ -0.35
SMAD5-205ENST00000509297 MAGEL2Q9UJ55 1249 aa12.88□□□□□ -0.35
SMAD5-205ENST00000509297 NOP16Q9Y3C1 178 aaKnown RBP12.88□□□□□ -0.35
SMAD5-205ENST00000509297 PCDHGB1Q9Y5G3 927 aa12.88□□□□□ -0.35
SMAD5-205ENST00000509297 PHYHO14832 338 aa12.87□□□□□ -0.35
SMAD5-205ENST00000509297 TMPRSS2O15393 492 aa12.87□□□□□ -0.35
SMAD5-205ENST00000509297 PTBP3O95758 552 aaKnown RBP12.87□□□□□ -0.35
SMAD5-205ENST00000509297 IGHV4-38-2P0DP08 117 aa12.87□□□□□ -0.35
SMAD5-205ENST00000509297 HSD17B1P14061 328 aa12.87□□□□□ -0.35
SMAD5-205ENST00000509297 IRF2P14316 349 aa12.87□□□□□ -0.35
SMAD5-205ENST00000509297 GSSP48637 474 aa12.87□□□□□ -0.35
SMAD5-205ENST00000509297 PITPNBP48739 271 aa12.87□□□□□ -0.35
SMAD5-205ENST00000509297 RAD23AP54725 363 aa12.87□□□□□ -0.35
SMAD5-205ENST00000509297 BPIFB3P59826 476 aa12.87□□□□□ -0.35
SMAD5-205ENST00000509297 IL13RA1P78552 427 aa12.87□□□□□ -0.35
SMAD5-205ENST00000509297 TRAP1Q12931 704 aaKnown RBP12.87□□□□□ -0.35
SMAD5-205ENST00000509297 MAB21L1Q13394 359 aa12.87□□□□□ -0.35
SMAD5-205ENST00000509297 SLC9A3R2Q15599 337 aa12.87□□□□□ -0.35
SMAD5-205ENST00000509297 PLPP7Q8NBV4 271 aa12.87□□□□□ -0.35
SMAD5-205ENST00000509297 BHLHE23Q8NDY6 225 aa12.87□□□□□ -0.35
SMAD5-205ENST00000509297 OR8B3Q8NGG8 313 aa12.87□□□□□ -0.35
SMAD5-205ENST00000509297 OR2AJ1Q8NGZ0 328 aa12.87□□□□□ -0.35
SMAD5-205ENST00000509297 OR4K13Q8NH42 304 aa12.87□□□□□ -0.35
SMAD5-205ENST00000509297 OR8B2Q96RD0 313 aa12.87□□□□□ -0.35
SMAD5-205ENST00000509297 IFT27Q9BW83 186 aa12.87□□□□□ -0.35
SMAD5-205ENST00000509297 CDADC1Q9BWV3 514 aa12.87□□□□□ -0.35
SMAD5-205ENST00000509297 PRDM13Q9H4Q3 707 aa12.87□□□□□ -0.35
SMAD5-205ENST00000509297 RPRD1BQ9NQG5 326 aaKnown RBP12.87□□□□□ -0.35
SMAD5-205ENST00000509297 ADA2Q9NZK5 511 aa12.87□□□□□ -0.35
SMAD5-205ENST00000509297 OR6C68A6NDL8 312 aa12.86□□□□□ -0.35
SMAD5-205ENST00000509297 F5H5K5 113 aa12.86□□□□□ -0.35
SMAD5-205ENST00000509297 WIPF1O43516 503 aa12.86□□□□□ -0.35
SMAD5-205ENST00000509297 OR10H3O60404 316 aa12.86□□□□□ -0.35
SMAD5-205ENST00000509297 ZNF205O95201 554 aa12.86□□□□□ -0.35
SMAD5-205ENST00000509297 NOS3P29474 1203 aa12.86□□□□□ -0.35
SMAD5-205ENST00000509297 PSMB10P40306 273 aa12.86□□□□□ -0.35
SMAD5-205ENST00000509297 TPTEP56180 551 aa12.86□□□□□ -0.35
SMAD5-205ENST00000509297 ZNF620Q6ZNG0 422 aa12.86□□□□□ -0.35
SMAD5-205ENST00000509297 PGAP1Q75T13 922 aa12.86□□□□□ -0.35
SMAD5-205ENST00000509297 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.86□□□□□ -0.35
SMAD5-205ENST00000509297 LINC00346Q8IVM7 164 aa12.86□□□□□ -0.35
SMAD5-205ENST00000509297 OR11L1Q8NGX0 322 aa12.86□□□□□ -0.35
SMAD5-205ENST00000509297 MCUR1Q96AQ8 359 aa12.86□□□□□ -0.35
SMAD5-205ENST00000509297 WDR76Q9H967 626 aa12.86□□□□□ -0.35
SMAD5-205ENST00000509297 IL1RAPQ9NPH3 570 aa12.86□□□□□ -0.35
SMAD5-205ENST00000509297 CLN8Q9UBY8 286 aa12.86□□□□□ -0.35
SMAD5-205ENST00000509297 LCATP04180 440 aa12.85□□□□□ -0.35
SMAD5-205ENST00000509297 HLA-DPB1P04440 258 aa12.85□□□□□ -0.35
SMAD5-205ENST00000509297 OTX1P32242 354 aaPredicted RBP12.85□□□□□ -0.35
SMAD5-205ENST00000509297 NPY4RP50391 375 aa12.85□□□□□ -0.35
SMAD5-205ENST00000509297 SPIBQ01892 262 aa12.85□□□□□ -0.35
SMAD5-205ENST00000509297 TSPAN31Q12999 210 aa12.85□□□□□ -0.35
SMAD5-205ENST00000509297 KCNJ8Q15842 424 aa12.85□□□□□ -0.35
SMAD5-205ENST00000509297 SPATS1Q496A3 300 aa12.85□□□□□ -0.35
SMAD5-205ENST00000509297 CLEC12AQ5QGZ9 265 aa12.85□□□□□ -0.35
SMAD5-205ENST00000509297 WDR25Q64LD2 544 aaPredicted RBP12.85□□□□□ -0.35
SMAD5-205ENST00000509297 RPL13AP3Q6NVV1 102 aa12.85□□□□□ -0.35
SMAD5-205ENST00000509297 ZNF841Q6ZN19 808 aa12.85□□□□□ -0.35
SMAD5-205ENST00000509297 FITM2Q8N6M3 262 aa12.85□□□□□ -0.35
SMAD5-205ENST00000509297 RNF148Q8N7C7 305 aa12.85□□□□□ -0.35
SMAD5-205ENST00000509297 SPTSSAQ969W0 71 aa12.85□□□□□ -0.35
SMAD5-205ENST00000509297 MAP6Q96JE9 813 aa12.85□□□□□ -0.35
SMAD5-205ENST00000509297 DUX5Q96PT3 197 aa12.85□□□□□ -0.35
SMAD5-205ENST00000509297 DDOQ99489 341 aa12.85□□□□□ -0.35
SMAD5-205ENST00000509297 NUDT16L1Q9BRJ7 211 aaKnown RBP12.85□□□□□ -0.35
SMAD5-205ENST00000509297 NSRP1Q9H0G5 558 aaKnown RBP12.85□□□□□ -0.35
SMAD5-205ENST00000509297 SLITRK2Q9H156 845 aa12.85□□□□□ -0.35
SMAD5-205ENST00000509297 MRPL22Q9NWU5 206 aaKnown RBP12.85□□□□□ -0.35
SMAD5-205ENST00000509297 TMCC3Q9ULS5 477 aa12.85□□□□□ -0.35
SMAD5-205ENST00000509297 M0R135 149 aa12.84□□□□□ -0.35
SMAD5-205ENST00000509297 GMDSO60547 372 aa12.84□□□□□ -0.35
SMAD5-205ENST00000509297 FAM20BO75063 409 aa12.84□□□□□ -0.35
SMAD5-205ENST00000509297 KRT36O76013 467 aa12.84□□□□□ -0.35
SMAD5-205ENST00000509297 FABP3P05413 133 aa12.84□□□□□ -0.35
SMAD5-205ENST00000509297 HMGA2P52926 109 aa12.84□□□□□ -0.35
SMAD5-205ENST00000509297 SAMD4BQ5PRF9 694 aaKnown RBP12.84□□□□□ -0.35
SMAD5-205ENST00000509297 MRPL21Q7Z2W9 205 aaKnown RBP12.84□□□□□ -0.35
SMAD5-205ENST00000509297 NAA40Q86UY6 237 aa12.84□□□□□ -0.35
SMAD5-205ENST00000509297 LINC00471Q8N535 108 aa12.84□□□□□ -0.35
SMAD5-205ENST00000509297 GNPDA2Q8TDQ7 276 aa12.84□□□□□ -0.35
SMAD5-205ENST00000509297 SPRYD4Q8WW59 207 aaPredicted RBP12.84□□□□□ -0.35
SMAD5-205ENST00000509297 SLCO4A1Q96BD0 722 aa12.84□□□□□ -0.35
SMAD5-205ENST00000509297 ZNF799Q96GE5 643 aa12.84□□□□□ -0.35
SMAD5-205ENST00000509297 NSMCE2Q96MF7 247 aa12.84□□□□□ -0.35
SMAD5-205ENST00000509297 ELAC2Q9BQ52 826 aaKnown RBP12.84□□□□□ -0.35
SMAD5-205ENST00000509297 UNKLQ9H9P5 680 aaKnown RBP12.84□□□□□ -0.35
SMAD5-205ENST00000509297 FN3KRPQ9HA64 309 aa12.84□□□□□ -0.35
SMAD5-205ENST00000509297 TRIM36Q9NQ86 728 aa12.84□□□□□ -0.35
SMAD5-205ENST00000509297 CD300AQ9UGN4 299 aa12.84□□□□□ -0.35
SMAD5-205ENST00000509297 MMP24Q9Y5R2 645 aa12.84□□□□□ -0.35
SMAD5-205ENST00000509297 TRAV40A0A0B4J280 105 aa12.83□□□□□ -0.36
SMAD5-205ENST00000509297 IGHV3-64DA0A0J9YX35 117 aa12.83□□□□□ -0.36
SMAD5-205ENST00000509297 CD300LBA8K4G0 201 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms