RNA–Protein interactions for RNA: ENST00000509101.1

CXCL1-202, Transcript of C-X-C motif chemokine ligand 1, humanhuman

TSL 3

Gene CXCL1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-202ENST00000509101 COQ7Q99807 217 aa13.22□□□□□ -0.29
CXCL1-202ENST00000509101 FNDC11Q9BVV2 318 aa13.22□□□□□ -0.29
CXCL1-202ENST00000509101 HDHD2Q9H0R4 259 aa13.22□□□□□ -0.29
CXCL1-202ENST00000509101 FXYD1O00168 92 aa13.21□□□□□ -0.29
CXCL1-202ENST00000509101 ARF6P62330 175 aa13.21□□□□□ -0.29
CXCL1-202ENST00000509101 TRAM2Q15035 370 aa13.21□□□□□ -0.29
CXCL1-202ENST00000509101 OR8B8Q15620 311 aa13.21□□□□□ -0.29
CXCL1-202ENST00000509101 KCNJ8Q15842 424 aa13.21□□□□□ -0.29
CXCL1-202ENST00000509101 MEP1BQ16820 701 aa13.21□□□□□ -0.29
CXCL1-202ENST00000509101 ERICH5Q6P6B1 374 aa13.21□□□□□ -0.29
CXCL1-202ENST00000509101 CORO6Q6QEF8 472 aa13.21□□□□□ -0.29
CXCL1-202ENST00000509101 FAM156AQ8NDB6 213 aa13.21□□□□□ -0.29
CXCL1-202ENST00000509101 OR8J3Q8NGG0 315 aa13.21□□□□□ -0.29
CXCL1-202ENST00000509101 LRTOMTQ8WZ04 291 aa13.21□□□□□ -0.29
CXCL1-202ENST00000509101 SEMA6AQ9H2E6 1030 aa13.21□□□□□ -0.29
CXCL1-202ENST00000509101 RASSF4Q9H2L5 321 aa13.21□□□□□ -0.29
CXCL1-202ENST00000509101 RNF7Q9UBF6 113 aa13.21□□□□□ -0.29
CXCL1-202ENST00000509101 RPS6KA6Q9UK32 745 aa13.21□□□□□ -0.29
CXCL1-202ENST00000509101 SNX13Q9Y5W8 968 aa13.21□□□□□ -0.29
CXCL1-202ENST00000509101 LHFPL6Q9Y693 200 aa13.21□□□□□ -0.29
CXCL1-202ENST00000509101 KMT2CQ8NEZ4 4911 aaKnown RBP13.21□□□□□ -0.3
CXCL1-202ENST00000509101 C5orf63A6NC05 138 aa13.2□□□□□ -0.3
CXCL1-202ENST00000509101 LGALS8O00214 317 aa13.2□□□□□ -0.3
CXCL1-202ENST00000509101 SOCS2O14508 198 aa13.2□□□□□ -0.3
CXCL1-202ENST00000509101 PIN1P1O15428 100 aa13.2□□□□□ -0.3
CXCL1-202ENST00000509101 SDHAP31040 664 aa13.2□□□□□ -0.3
CXCL1-202ENST00000509101 KDELR2P33947 212 aa13.2□□□□□ -0.3
CXCL1-202ENST00000509101 CENPAP49450 140 aa13.2□□□□□ -0.3
CXCL1-202ENST00000509101 EGR3Q06889 387 aa13.2□□□□□ -0.3
CXCL1-202ENST00000509101 GK2Q14410 553 aaPredicted RBP13.2□□□□□ -0.3
CXCL1-202ENST00000509101 ZBED5Q49AG3 693 aa13.2□□□□□ -0.3
CXCL1-202ENST00000509101 TBPL2Q6SJ96 375 aa13.2□□□□□ -0.3
CXCL1-202ENST00000509101 ZNF730Q6ZMV8 503 aa13.2□□□□□ -0.3
CXCL1-202ENST00000509101 GJC3Q8NFK1 279 aa13.2□□□□□ -0.3
CXCL1-202ENST00000509101 ACOT11Q8WXI4 607 aaPredicted RBP13.2□□□□□ -0.3
CXCL1-202ENST00000509101 ZNF583Q96ND8 569 aa13.2□□□□□ -0.3
CXCL1-202ENST00000509101 SH3GL1Q99961 368 aa13.2□□□□□ -0.3
CXCL1-202ENST00000509101 NDEL1Q9GZM8 345 aa13.2□□□□□ -0.3
CXCL1-202ENST00000509101 NUAK2Q9H093 628 aa13.2□□□□□ -0.3
CXCL1-202ENST00000509101 DPAGT1Q9H3H5 408 aa13.2□□□□□ -0.3
CXCL1-202ENST00000509101 C16orf95Q9H693 158 aa13.2□□□□□ -0.3
CXCL1-202ENST00000509101 FN3KRPQ9HA64 309 aa13.2□□□□□ -0.3
CXCL1-202ENST00000509101 VSX1Q9NZR4 365 aaPredicted RBP13.2□□□□□ -0.3
CXCL1-202ENST00000509101 A0A087WUU8 490 aa13.19□□□□□ -0.3
CXCL1-202ENST00000509101 FFAR1O14842 300 aa13.19□□□□□ -0.3
CXCL1-202ENST00000509101 OR10H3O60404 316 aa13.19□□□□□ -0.3
CXCL1-202ENST00000509101 FCN3O75636 299 aa13.19□□□□□ -0.3
CXCL1-202ENST00000509101 HIST1H3AP68431 136 aa13.19□□□□□ -0.3
CXCL1-202ENST00000509101 SF3A3Q12874 501 aaKnown RBP eCLIP13.19□□□□□ -0.3
CXCL1-202ENST00000509101 COX10Q12887 443 aa13.19□□□□□ -0.3
CXCL1-202ENST00000509101 OR8G1Q15617 311 aa13.19□□□□□ -0.3
CXCL1-202ENST00000509101 KCNMB1Q16558 191 aa13.19□□□□□ -0.3
CXCL1-202ENST00000509101 HIST2H3PS2Q5TEC6 136 aa13.19□□□□□ -0.3
CXCL1-202ENST00000509101 CGB2Q6NT52 195 aa13.19□□□□□ -0.3
CXCL1-202ENST00000509101 Q6ZPA2 131 aa13.19□□□□□ -0.3
CXCL1-202ENST00000509101 COLCA1Q6ZS62 124 aa13.19□□□□□ -0.3
CXCL1-202ENST00000509101 PTCHD4Q6ZW05 846 aa13.19□□□□□ -0.3
CXCL1-202ENST00000509101 MBOAT2Q6ZWT7 520 aa13.19□□□□□ -0.3
CXCL1-202ENST00000509101 HIST2H3AQ71DI3 136 aa13.19□□□□□ -0.3
CXCL1-202ENST00000509101 BTN2A1Q7KYR7 527 aa13.19□□□□□ -0.3
CXCL1-202ENST00000509101 VMO1Q7Z5L0 202 aa13.19□□□□□ -0.3
CXCL1-202ENST00000509101 VTCN1Q7Z7D3 282 aa13.19□□□□□ -0.3
CXCL1-202ENST00000509101 PIP4P2Q8N4L2 257 aa13.19□□□□□ -0.3
CXCL1-202ENST00000509101 STON2Q8WXE9 905 aa13.19□□□□□ -0.3
CXCL1-202ENST00000509101 SLCO4A1Q96BD0 722 aa13.19□□□□□ -0.3
CXCL1-202ENST00000509101 ADAT1Q9BUB4 502 aaKnown RBP13.19□□□□□ -0.3
CXCL1-202ENST00000509101 NMNAT1Q9HAN9 279 aaPredicted RBP13.19□□□□□ -0.3
CXCL1-202ENST00000509101 FAM96BQ9Y3D0 163 aa13.19□□□□□ -0.3
CXCL1-202ENST00000509101 ZNF816-ZNF321PA0A0X1KG74 233 aa13.18□□□□□ -0.3
CXCL1-202ENST00000509101 BTBD17A6NE02 478 aa13.18□□□□□ -0.3
CXCL1-202ENST00000509101 FAM220BPB1ANY3 271 aa13.18□□□□□ -0.3
CXCL1-202ENST00000509101 GYPAP02724 150 aa13.18□□□□□ -0.3
CXCL1-202ENST00000509101 IFNW1P05000 195 aa13.18□□□□□ -0.3
CXCL1-202ENST00000509101 ACSM4P0C7M7 580 aa13.18□□□□□ -0.3
CXCL1-202ENST00000509101 CA6P23280 308 aa13.18□□□□□ -0.3
CXCL1-202ENST00000509101 SELENOWP63302 87 aa13.18□□□□□ -0.3
CXCL1-202ENST00000509101 RSPO1Q2MKA7 263 aaPredicted RBP13.18□□□□□ -0.3
CXCL1-202ENST00000509101 TMPRSS11FQ6ZWK6 438 aa13.18□□□□□ -0.3
CXCL1-202ENST00000509101 LINC00346Q8IVM7 164 aa13.18□□□□□ -0.3
CXCL1-202ENST00000509101 RNF113BQ8IZP6 322 aaKnown RBP13.18□□□□□ -0.3
CXCL1-202ENST00000509101 SPRYD4Q8WW59 207 aaPredicted RBP13.18□□□□□ -0.3
CXCL1-202ENST00000509101 LZICQ8WZA0 190 aa13.18□□□□□ -0.3
CXCL1-202ENST00000509101 ST8SIA4Q92187 359 aa13.18□□□□□ -0.3
CXCL1-202ENST00000509101 FAM46AQ96IP4 442 aaKnown RBP13.18□□□□□ -0.3
CXCL1-202ENST00000509101 TSSK2Q96PF2 358 aa13.18□□□□□ -0.3
CXCL1-202ENST00000509101 FGFR1OP2Q9NVK5 253 aa13.18□□□□□ -0.3
CXCL1-202ENST00000509101 ZNRD1Q9P1U0 126 aa13.18□□□□□ -0.3
CXCL1-202ENST00000509101 VPREB3Q9UKI3 123 aa13.18□□□□□ -0.3
CXCL1-202ENST00000509101 DNAH3Q8TD57 4116 aa13.17□□□□□ -0.3
CXCL1-202ENST00000509101 TRAV38-1A0A0B4J264 116 aa13.17□□□□□ -0.3
CXCL1-202ENST00000509101 A0A0G2JND7 137 aa13.17□□□□□ -0.3
CXCL1-202ENST00000509101 OOEPA6NGQ2 149 aa13.17□□□□□ -0.3
CXCL1-202ENST00000509101 F5H5K5 113 aa13.17□□□□□ -0.3
CXCL1-202ENST00000509101 DVL1O14640 695 aa13.17□□□□□ -0.3
CXCL1-202ENST00000509101 MRASO14807 208 aa13.17□□□□□ -0.3
CXCL1-202ENST00000509101 TSPAN9O75954 239 aa13.17□□□□□ -0.3
CXCL1-202ENST00000509101 NDUFB2O95178 105 aa13.17□□□□□ -0.3
CXCL1-202ENST00000509101 LCATP04180 440 aa13.17□□□□□ -0.3
CXCL1-202ENST00000509101 FBP1P09467 338 aa13.17□□□□□ -0.3
CXCL1-202ENST00000509101 MALLQ13021 153 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms