RNA–Protein interactions for RNA: ENST00000509043.1

HTT-205, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 380 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-205ENST00000509043 OR10D3Q8NH80 312 aa8.16□□□□□ -1.1
HTT-205ENST00000509043 RELTQ969Z4 430 aa8.16□□□□□ -1.1
HTT-205ENST00000509043 NABP1Q96AH0 204 aa8.16□□□□□ -1.1
HTT-205ENST00000509043 CPNE2Q96FN4 548 aaPredicted RBP8.16□□□□□ -1.1
HTT-205ENST00000509043 FAM210AQ96ND0 272 aa8.16□□□□□ -1.1
HTT-205ENST00000509043 ZNF385AQ96PM9 386 aaKnown RBP8.16□□□□□ -1.1
HTT-205ENST00000509043 SRXN1Q9BYN0 137 aa8.16□□□□□ -1.1
HTT-205ENST00000509043 LINC00470Q9BZP3 86 aa8.16□□□□□ -1.1
HTT-205ENST00000509043 C20orf85Q9H1P6 137 aa8.16□□□□□ -1.1
HTT-205ENST00000509043 ATG5Q9H1Y0 275 aa8.16□□□□□ -1.1
HTT-205ENST00000509043 OR51J1Q9H342 316 aa8.16□□□□□ -1.1
HTT-205ENST00000509043 ZNF703Q9H7S9 590 aaPredicted RBP8.16□□□□□ -1.1
HTT-205ENST00000509043 RNF122Q9H9V4 155 aa8.16□□□□□ -1.1
HTT-205ENST00000509043 PARPBPQ9NWS1 579 aa8.16□□□□□ -1.1
HTT-205ENST00000509043 ATPIF1Q9UII2 106 aa8.16□□□□□ -1.1
HTT-205ENST00000509043 LAMA1P25391 3075 aa8.15□□□□□ -1.1
HTT-205ENST00000509043 TRAV18A0A075B6X5 111 aa8.15□□□□□ -1.1
HTT-205ENST00000509043 A0A0A6YYJ9 748 aa8.15□□□□□ -1.1
HTT-205ENST00000509043 LOC101059948A0A1B0GTJ6 334 aa8.15□□□□□ -1.1
HTT-205ENST00000509043 A0A1W2PNU3 283 aaPredicted RBP8.15□□□□□ -1.1
HTT-205ENST00000509043 DCDC2BA2VCK2 349 aa8.15□□□□□ -1.1
HTT-205ENST00000509043 SNRPGP15A8MWD9 76 aa8.15□□□□□ -1.1
HTT-205ENST00000509043 KLRC4-KLRK1H3BQV0 150 aa8.15□□□□□ -1.1
HTT-205ENST00000509043 RER1O15258 196 aa8.15□□□□□ -1.1
HTT-205ENST00000509043 DOK2O60496 412 aa8.15□□□□□ -1.1
HTT-205ENST00000509043 TRAPPC6AO75865 159 aa8.15□□□□□ -1.1
HTT-205ENST00000509043 NDUFB6O95139 128 aa8.15□□□□□ -1.1
HTT-205ENST00000509043 MT-ND4P03905 459 aa8.15□□□□□ -1.1
HTT-205ENST00000509043 CHRM2P08172 466 aa8.15□□□□□ -1.1
HTT-205ENST00000509043 MELTFP08582 738 aa8.15□□□□□ -1.1
HTT-205ENST00000509043 AKAIN1P0CW23 69 aa8.15□□□□□ -1.1
HTT-205ENST00000509043 ITGA3P26006 1051 aa8.15□□□□□ -1.1
HTT-205ENST00000509043 RCVRNP35243 200 aa8.15□□□□□ -1.1
HTT-205ENST00000509043 THBS4P35443 961 aa8.15□□□□□ -1.1
HTT-205ENST00000509043 TAS2R19P59542 299 aa8.15□□□□□ -1.1
HTT-205ENST00000509043 SPOCK1Q08629 439 aa8.15□□□□□ -1.1
HTT-205ENST00000509043 ARL6IP1Q15041 203 aa8.15□□□□□ -1.1
HTT-205ENST00000509043 ZMYND11Q15326 602 aa8.15□□□□□ -1.1
HTT-205ENST00000509043 RBMS2Q15434 407 aaKnown RBP8.15□□□□□ -1.1
HTT-205ENST00000509043 OR1C1Q15619 314 aa8.15□□□□□ -1.1
HTT-205ENST00000509043 PCGF3Q3KNV8 242 aa8.15□□□□□ -1.1
HTT-205ENST00000509043 OTPQ5XKR4 325 aa8.15□□□□□ -1.1
HTT-205ENST00000509043 IGF2-ASQ6U949 168 aa8.15□□□□□ -1.1
HTT-205ENST00000509043 UTS2BQ765I0 119 aa8.15□□□□□ -1.1
HTT-205ENST00000509043 YRDCQ86U90 279 aaKnown RBP8.15□□□□□ -1.1
HTT-205ENST00000509043 MEIOBQ8N635 442 aa8.15□□□□□ -1.1
HTT-205ENST00000509043 TMEM229BQ8NBD8 167 aa8.15□□□□□ -1.1
HTT-205ENST00000509043 OR8B12Q8NGG6 310 aa8.15□□□□□ -1.1
HTT-205ENST00000509043 OR1J2Q8NGS2 313 aa8.15□□□□□ -1.1
HTT-205ENST00000509043 OR51E1Q8TCB6 317 aa8.15□□□□□ -1.1
HTT-205ENST00000509043 GPX8Q8TED1 209 aa8.15□□□□□ -1.1
HTT-205ENST00000509043 ASB13Q8WXK3 278 aa8.15□□□□□ -1.1
HTT-205ENST00000509043 PPP1R14AQ96A00 147 aa8.15□□□□□ -1.1
HTT-205ENST00000509043 FAM46BQ96A09 425 aa8.15□□□□□ -1.1
HTT-205ENST00000509043 PGAM5Q96HS1 289 aa8.15□□□□□ -1.1
HTT-205ENST00000509043 HYLS1Q96M11 299 aa8.15□□□□□ -1.1
HTT-205ENST00000509043 UCN2Q96RP3 112 aa8.15□□□□□ -1.1
HTT-205ENST00000509043 RBM24Q9BX46 236 aaKnown RBP8.15□□□□□ -1.1
HTT-205ENST00000509043 OR10A2Q9H208 303 aa8.15□□□□□ -1.1
HTT-205ENST00000509043 RGCCQ9H4X1 137 aa8.15□□□□□ -1.1
HTT-205ENST00000509043 RANBP3Q9H6Z4 567 aaPredicted RBP8.15□□□□□ -1.1
HTT-205ENST00000509043 GPN1Q9HCN4 374 aaPredicted RBP8.15□□□□□ -1.1
HTT-205ENST00000509043 RANGRFQ9HD47 186 aaPredicted RBP8.15□□□□□ -1.1
HTT-205ENST00000509043 DEPPQ9NTK1 212 aa8.15□□□□□ -1.1
HTT-205ENST00000509043 UPB1Q9UBR1 384 aa8.15□□□□□ -1.1
HTT-205ENST00000509043 ING4Q9UNL4 249 aa8.15□□□□□ -1.1
HTT-205ENST00000509043 RHBDD3Q9Y3P4 386 aa8.15□□□□□ -1.1
HTT-205ENST00000509043 TRAV6A0A075B6T7 132 aa8.14□□□□□ -1.11
HTT-205ENST00000509043 A0A0G2JMM0 328 aa8.14□□□□□ -1.11
HTT-205ENST00000509043 A0A1W2PPB8 328 aa8.14□□□□□ -1.11
HTT-205ENST00000509043 A0A1W2PRS3 328 aa8.14□□□□□ -1.11
HTT-205ENST00000509043 PMS2P1A4D2B8 440 aa8.14□□□□□ -1.11
HTT-205ENST00000509043 KIR3DP1A8MWS1 328 aa8.14□□□□□ -1.11
HTT-205ENST00000509043 CXCL13O43927 109 aa8.14□□□□□ -1.11
HTT-205ENST00000509043 NME2P1O60361 137 aa8.14□□□□□ -1.11
HTT-205ENST00000509043 DHRS3O75911 302 aa8.14□□□□□ -1.11
HTT-205ENST00000509043 FARS2O95363 451 aaKnown RBP8.14□□□□□ -1.11
HTT-205ENST00000509043 SYNGR4O95473 234 aa8.14□□□□□ -1.11
HTT-205ENST00000509043 ACTL6AO96019 429 aa8.14□□□□□ -1.11
HTT-205ENST00000509043 RFPL3SP0C7P2 107 aa8.14□□□□□ -1.11
HTT-205ENST00000509043 ANXA3P12429 323 aa8.14□□□□□ -1.11
HTT-205ENST00000509043 PRF1P14222 555 aa8.14□□□□□ -1.11
HTT-205ENST00000509043 CPN1P15169 458 aa8.14□□□□□ -1.11
HTT-205ENST00000509043 TBPP20226 339 aa8.14□□□□□ -1.11
HTT-205ENST00000509043 NME2P22392 152 aa8.14□□□□□ -1.11
HTT-205ENST00000509043 ZNF93P35789 620 aaPredicted RBP8.14□□□□□ -1.11
HTT-205ENST00000509043 ALDH3B1P43353 468 aa8.14□□□□□ -1.11
HTT-205ENST00000509043 GZMKP49863 264 aa8.14□□□□□ -1.11
HTT-205ENST00000509043 SELENOPP49908 381 aa8.14□□□□□ -1.11
HTT-205ENST00000509043 PRKXP51817 358 aa8.14□□□□□ -1.11
HTT-205ENST00000509043 EFNB2P52799 333 aa8.14□□□□□ -1.11
HTT-205ENST00000509043 CD83Q01151 205 aa8.14□□□□□ -1.11
HTT-205ENST00000509043 GALK2Q01415 458 aa8.14□□□□□ -1.11
HTT-205ENST00000509043 TNK1Q13470 666 aa8.14□□□□□ -1.11
HTT-205ENST00000509043 MEF2DQ14814 521 aa8.14□□□□□ -1.11
HTT-205ENST00000509043 CDK10Q15131 360 aa8.14□□□□□ -1.11
HTT-205ENST00000509043 RNASE12Q5GAN4 147 aaKnown RBP8.14□□□□□ -1.11
HTT-205ENST00000509043 WIPI1Q5MNZ9 446 aaPredicted RBP8.14□□□□□ -1.11
HTT-205ENST00000509043 GLCCI1Q86VQ1 547 aa8.14□□□□□ -1.11
HTT-205ENST00000509043 COMMD2Q86X83 199 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms