RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 AGO1Q9UL18 857 aaKnown RBP3.49□□□□□ -1.85
NEDD4-209ENST00000508871 NEU3Q9UQ49 428 aa3.49□□□□□ -1.85
NEDD4-209ENST00000508871 TCF19Q9Y242 345 aa3.49□□□□□ -1.85
NEDD4-209ENST00000508871 DENND4AQ7Z401 1863 aa3.49□□□□□ -1.85
NEDD4-209ENST00000508871 TRAV19A0A0A6YYK7 116 aa3.49□□□□□ -1.85
NEDD4-209ENST00000508871 C9orf172C9J069 976 aa3.49□□□□□ -1.85
NEDD4-209ENST00000508871 IGSF6O95976 241 aa3.49□□□□□ -1.85
NEDD4-209ENST00000508871 ADRB1P08588 477 aa3.49□□□□□ -1.85
NEDD4-209ENST00000508871 GTF2F2P13984 249 aa3.49□□□□□ -1.85
NEDD4-209ENST00000508871 RPL35AP18077 110 aaKnown RBP3.49□□□□□ -1.85
NEDD4-209ENST00000508871 LEPP41159 167 aa3.49□□□□□ -1.85
NEDD4-209ENST00000508871 GDF5P43026 501 aa3.49□□□□□ -1.85
NEDD4-209ENST00000508871 SUB1P53999 127 aaKnown RBP eCLIP3.49□□□□□ -1.85
NEDD4-209ENST00000508871 GP2P55259 537 aaKnown RBP3.49□□□□□ -1.85
NEDD4-209ENST00000508871 RPS15AP62244 130 aaKnown RBP3.49□□□□□ -1.85
NEDD4-209ENST00000508871 SLAMF1Q13291 335 aa3.49□□□□□ -1.85
NEDD4-209ENST00000508871 SLC17A1Q14916 467 aa3.49□□□□□ -1.85
NEDD4-209ENST00000508871 AKR1C8PQ5T2L2 129 aa3.49□□□□□ -1.85
NEDD4-209ENST00000508871 CTU1Q7Z7A3 348 aaKnown RBP3.49□□□□□ -1.85
NEDD4-209ENST00000508871 OR6V1Q8N148 313 aa3.49□□□□□ -1.85
NEDD4-209ENST00000508871 CYB561A3Q8NBI2 242 aa3.49□□□□□ -1.85
NEDD4-209ENST00000508871 OR51A7Q8NH64 312 aa3.49□□□□□ -1.85
NEDD4-209ENST00000508871 LIPHQ8WWY8 451 aa3.49□□□□□ -1.85
NEDD4-209ENST00000508871 DIRAS2Q96HU8 199 aa3.49□□□□□ -1.85
NEDD4-209ENST00000508871 CHRNA10Q9GZZ6 450 aa3.49□□□□□ -1.85
NEDD4-209ENST00000508871 AKIP1Q9NQ31 210 aa3.49□□□□□ -1.85
NEDD4-209ENST00000508871 MUC22E2RYF6 1773 aaPredicted RBP3.49□□□□□ -1.85
NEDD4-209ENST00000508871 KBTBD11-OT1A0A1B0GTJ5 212 aa3.49□□□□□ -1.85
NEDD4-209ENST00000508871 ACOX3O15254 700 aa3.49□□□□□ -1.85
NEDD4-209ENST00000508871 SCGB1C2P0DMR2 95 aa3.49□□□□□ -1.85
NEDD4-209ENST00000508871 SRFP11831 508 aa3.49□□□□□ -1.85
NEDD4-209ENST00000508871 CCR7P32248 378 aa3.49□□□□□ -1.85
NEDD4-209ENST00000508871 MAS1LP35410 378 aa3.49□□□□□ -1.85
NEDD4-209ENST00000508871 BCL2L1Q07817 233 aa3.49□□□□□ -1.85
NEDD4-209ENST00000508871 OR5I1Q13606 314 aa3.49□□□□□ -1.85
NEDD4-209ENST00000508871 CPTPQ5TA50 214 aa3.49□□□□□ -1.85
NEDD4-209ENST00000508871 PLET1Q6UQ28 207 aa3.49□□□□□ -1.85
NEDD4-209ENST00000508871 BTNL3Q6UXE8 466 aa3.49□□□□□ -1.85
NEDD4-209ENST00000508871 LSMEM2Q8N112 164 aa3.49□□□□□ -1.85
NEDD4-209ENST00000508871 OR1J1Q8NGS3 322 aa3.49□□□□□ -1.85
NEDD4-209ENST00000508871 MAPK15Q8TD08 544 aa3.49□□□□□ -1.85
NEDD4-209ENST00000508871 SCGB1C1Q8TD33 95 aa3.49□□□□□ -1.85
NEDD4-209ENST00000508871 UFD1Q92890 307 aa3.49□□□□□ -1.85
NEDD4-209ENST00000508871 BTN2A3PQ96KV6 586 aa3.49□□□□□ -1.85
NEDD4-209ENST00000508871 CLN8Q9UBY8 286 aa3.49□□□□□ -1.85
NEDD4-209ENST00000508871 TBX21Q9UL17 535 aa3.49□□□□□ -1.85
NEDD4-209ENST00000508871 RNF6Q9Y252 685 aa3.49□□□□□ -1.85
NEDD4-209ENST00000508871 ZNF780BQ9Y6R6 833 aa3.49□□□□□ -1.85
NEDD4-209ENST00000508871 MROH6A6NGR9 719 aa3.48□□□□□ -1.85
NEDD4-209ENST00000508871 FAM90A8PA6NJQ4 464 aa3.48□□□□□ -1.85
NEDD4-209ENST00000508871 UPK3AO75631 287 aa3.48□□□□□ -1.85
NEDD4-209ENST00000508871 TSPAN13O95857 204 aa3.48□□□□□ -1.85
NEDD4-209ENST00000508871 MT-CO3P00414 261 aa3.48□□□□□ -1.85
NEDD4-209ENST00000508871 HPXP02790 462 aa3.48□□□□□ -1.85
NEDD4-209ENST00000508871 FABP3P05413 133 aa3.48□□□□□ -1.85
NEDD4-209ENST00000508871 BCHEP06276 602 aa3.48□□□□□ -1.85
NEDD4-209ENST00000508871 FAM90A13PP0C7W8 464 aa3.48□□□□□ -1.85
NEDD4-209ENST00000508871 FAM90A24PP0C7X0 464 aa3.48□□□□□ -1.85
NEDD4-209ENST00000508871 TBXA2RP21731 343 aa3.48□□□□□ -1.85
NEDD4-209ENST00000508871 DCTP40126 519 aa3.48□□□□□ -1.85
NEDD4-209ENST00000508871 OR3A4PP47883 348 aa3.48□□□□□ -1.85
NEDD4-209ENST00000508871 HIST1H3AP68431 136 aa3.48□□□□□ -1.85
NEDD4-209ENST00000508871 SELENBP1Q13228 472 aa3.48□□□□□ -1.85
NEDD4-209ENST00000508871 PRSS8Q16651 343 aa3.48□□□□□ -1.85
NEDD4-209ENST00000508871 RBM23Q86U06 439 aaKnown RBP3.48□□□□□ -1.85
NEDD4-209ENST00000508871 TCTE3Q8IZS6 198 aa3.48□□□□□ -1.85
NEDD4-209ENST00000508871 ZNF709Q8N972 641 aa3.48□□□□□ -1.85
NEDD4-209ENST00000508871 SLC25A43Q8WUT9 341 aaPredicted RBP3.48□□□□□ -1.85
NEDD4-209ENST00000508871 TMEM56Q96MV1 263 aa3.48□□□□□ -1.85
NEDD4-209ENST00000508871 GPR22Q99680 433 aa3.48□□□□□ -1.85
NEDD4-209ENST00000508871 ARHGDIGQ99819 225 aa3.48□□□□□ -1.85
NEDD4-209ENST00000508871 KLHDC3Q9BQ90 382 aa3.48□□□□□ -1.85
NEDD4-209ENST00000508871 ZNF331Q9NQX6 463 aaPredicted RBP3.48□□□□□ -1.85
NEDD4-209ENST00000508871 AK6Q9Y3D8 172 aaKnown RBP3.48□□□□□ -1.85
NEDD4-209ENST00000508871 HEBP2Q9Y5Z4 205 aa3.48□□□□□ -1.85
NEDD4-209ENST00000508871 A0A0A0MQY5 61 aa3.48□□□□□ -1.85
NEDD4-209ENST00000508871 LINC01553A4QN01 128 aa3.48□□□□□ -1.85
NEDD4-209ENST00000508871 EFCAB10A6NFE3 127 aa3.48□□□□□ -1.85
NEDD4-209ENST00000508871 FAM159BA6NKW6 160 aa3.48□□□□□ -1.85
NEDD4-209ENST00000508871 BBIP1A8MTZ0 92 aa3.48□□□□□ -1.85
NEDD4-209ENST00000508871 FTCDNL1E5RQL4 147 aa3.48□□□□□ -1.85
NEDD4-209ENST00000508871 TAAR5O14804 337 aa3.48□□□□□ -1.85
NEDD4-209ENST00000508871 TBL1XO60907 577 aa3.48□□□□□ -1.85
NEDD4-209ENST00000508871 ZNF780AO75290 641 aaPredicted RBP3.48□□□□□ -1.85
NEDD4-209ENST00000508871 NCR1O76036 304 aa3.48□□□□□ -1.85
NEDD4-209ENST00000508871 CST1P01037 141 aa3.48□□□□□ -1.85
NEDD4-209ENST00000508871 HBZP02008 142 aa3.48□□□□□ -1.85
NEDD4-209ENST00000508871 CATP04040 527 aaKnown RBP3.48□□□□□ -1.85
NEDD4-209ENST00000508871 OR9G9P0C7N8 305 aa3.48□□□□□ -1.85
NEDD4-209ENST00000508871 ZNF250P15622 560 aa3.48□□□□□ -1.85
NEDD4-209ENST00000508871 HIST1H1TP22492 207 aaPredicted RBP3.48□□□□□ -1.85
NEDD4-209ENST00000508871 EDNRAP25101 427 aa3.48□□□□□ -1.85
NEDD4-209ENST00000508871 ELAVL4P26378 380 aaKnown RBP3.48□□□□□ -1.85
NEDD4-209ENST00000508871 TEAD1P28347 426 aa3.48□□□□□ -1.85
NEDD4-209ENST00000508871 MAP2K4P45985 399 aa3.48□□□□□ -1.85
NEDD4-209ENST00000508871 HLXQ14774 488 aaPredicted RBP3.48□□□□□ -1.85
NEDD4-209ENST00000508871 GPNMBQ14956 572 aa3.48□□□□□ -1.85
NEDD4-209ENST00000508871 HES3Q5TGS1 186 aa3.48□□□□□ -1.85
NEDD4-209ENST00000508871 LGI4Q8N135 537 aa3.48□□□□□ -1.85
NEDD4-209ENST00000508871 TMEM178AQ8NBL3 297 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms