RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 RMND5BQ96G75 393 aaPredicted RBP2.66□□□□□ -1.98
TOPBP1-206ENST00000508524 C12orf66Q96MD2 445 aa2.66□□□□□ -1.98
TOPBP1-206ENST00000508524 TGM7Q96PF1 710 aa2.66□□□□□ -1.98
TOPBP1-206ENST00000508524 SLC35A5Q9BS91 424 aa2.66□□□□□ -1.98
TOPBP1-206ENST00000508524 INPP5EQ9NRR6 644 aa2.66□□□□□ -1.98
TOPBP1-206ENST00000508524 SAMSN1Q9NSI8 373 aaKnown RBP2.66□□□□□ -1.98
TOPBP1-206ENST00000508524 MOSPD1Q9UJG1 213 aa2.66□□□□□ -1.98
TOPBP1-206ENST00000508524 VANGL2Q9ULK5 521 aa2.66□□□□□ -1.98
TOPBP1-206ENST00000508524 WIF1Q9Y5W5 379 aa2.66□□□□□ -1.98
TOPBP1-206ENST00000508524 CCDC88CQ9P219 2028 aa2.66□□□□□ -1.98
TOPBP1-206ENST00000508524 TENM2Q9NT68 2774 aa2.66□□□□□ -1.98
TOPBP1-206ENST00000508524 DYSFO75923 2080 aa2.65□□□□□ -1.98
TOPBP1-206ENST00000508524 HERC2O95714 4834 aa2.65□□□□□ -1.98
TOPBP1-206ENST00000508524 G3V4G9 280 aa2.65□□□□□ -1.99
TOPBP1-206ENST00000508524 HLA-DRAP01903 254 aa2.65□□□□□ -1.99
TOPBP1-206ENST00000508524 NELFEP18615 380 aaKnown RBP2.65□□□□□ -1.99
TOPBP1-206ENST00000508524 SHMT2P34897 504 aa2.65□□□□□ -1.99
TOPBP1-206ENST00000508524 ACTR1BP42025 376 aa2.65□□□□□ -1.99
TOPBP1-206ENST00000508524 VDAC2P45880 294 aaPredicted RBP2.65□□□□□ -1.99
TOPBP1-206ENST00000508524 ACTR1AP61163 376 aa2.65□□□□□ -1.99
TOPBP1-206ENST00000508524 RPS15P62841 145 aaKnown RBP2.65□□□□□ -1.99
TOPBP1-206ENST00000508524 RIPK1Q13546 671 aa2.65□□□□□ -1.99
TOPBP1-206ENST00000508524 RSPO1Q2MKA7 263 aaPredicted RBP2.65□□□□□ -1.99
TOPBP1-206ENST00000508524 ABCA11PQ4W5N1 156 aa2.65□□□□□ -1.99
TOPBP1-206ENST00000508524 BOLA3Q53S33 107 aa2.65□□□□□ -1.99
TOPBP1-206ENST00000508524 CARD16Q5EG05 197 aa2.65□□□□□ -1.99
TOPBP1-206ENST00000508524 FRMPD2BQ6IN97 320 aa2.65□□□□□ -1.99
TOPBP1-206ENST00000508524 PMF1Q6P1K2 205 aa2.65□□□□□ -1.99
TOPBP1-206ENST00000508524 CBLN3Q6UW01 205 aa2.65□□□□□ -1.99
TOPBP1-206ENST00000508524 Q6ZPB1 254 aaPredicted RBP2.65□□□□□ -1.99
TOPBP1-206ENST00000508524 Q6ZR03 302 aa2.65□□□□□ -1.99
TOPBP1-206ENST00000508524 FAM92BQ6ZTR7 304 aa2.65□□□□□ -1.99
TOPBP1-206ENST00000508524 GDPD3Q7L5L3 318 aa2.65□□□□□ -1.99
TOPBP1-206ENST00000508524 FTMTQ8N4E7 242 aa2.65□□□□□ -1.99
TOPBP1-206ENST00000508524 OR10G6Q8NH81 332 aa2.65□□□□□ -1.99
TOPBP1-206ENST00000508524 UBALD1Q8TB05 177 aa2.65□□□□□ -1.99
TOPBP1-206ENST00000508524 MGARPQ8TDB4 240 aa2.65□□□□□ -1.99
TOPBP1-206ENST00000508524 ZNF670Q9BS34 389 aa2.65□□□□□ -1.99
TOPBP1-206ENST00000508524 MRPL13Q9BYD1 178 aaKnown RBP2.65□□□□□ -1.99
TOPBP1-206ENST00000508524 ROGDIQ9GZN7 287 aa2.65□□□□□ -1.99
TOPBP1-206ENST00000508524 RWDD1Q9H446 243 aaPredicted RBP2.65□□□□□ -1.99
TOPBP1-206ENST00000508524 PLEKHF2Q9H8W4 249 aa2.65□□□□□ -1.99
TOPBP1-206ENST00000508524 AGPAT3Q9NRZ7 376 aa2.65□□□□□ -1.99
TOPBP1-206ENST00000508524 SEC14L3Q9UDX4 400 aa2.65□□□□□ -1.99
TOPBP1-206ENST00000508524 GSTK1Q9Y2Q3 226 aa2.65□□□□□ -1.99
TOPBP1-206ENST00000508524 DNAJC13O75165 2243 aa2.65□□□□□ -1.99
TOPBP1-206ENST00000508524 MPDZO75970 2070 aa2.64□□□□□ -1.99
TOPBP1-206ENST00000508524 F5H5T6 163 aa2.64□□□□□ -1.99
TOPBP1-206ENST00000508524 DCTN6O00399 190 aa2.64□□□□□ -1.99
TOPBP1-206ENST00000508524 XPO1O14980 1071 aaKnown RBP2.64□□□□□ -1.99
TOPBP1-206ENST00000508524 AGPAT2O15120 278 aa2.64□□□□□ -1.99
TOPBP1-206ENST00000508524 MAPK13O15264 365 aa2.64□□□□□ -1.99
TOPBP1-206ENST00000508524 ADCY5O95622 1261 aa2.64□□□□□ -1.99
TOPBP1-206ENST00000508524 SOD1P00441 154 aa2.64□□□□□ -1.99
TOPBP1-206ENST00000508524 HNF1AP20823 631 aa2.64□□□□□ -1.99
TOPBP1-206ENST00000508524 PRPHP41219 470 aa2.64□□□□□ -1.99
TOPBP1-206ENST00000508524 ACTA2P62736 377 aa2.64□□□□□ -1.99
TOPBP1-206ENST00000508524 UBE2IP63279 158 aaKnown RBP2.64□□□□□ -1.99
TOPBP1-206ENST00000508524 ACTC1P68032 377 aa2.64□□□□□ -1.99
TOPBP1-206ENST00000508524 NCF4Q15080 339 aa2.64□□□□□ -1.99
TOPBP1-206ENST00000508524 TRIM16LQ309B1 348 aa2.64□□□□□ -1.99
TOPBP1-206ENST00000508524 KPRPQ5T749 579 aaPredicted RBP2.64□□□□□ -1.99
TOPBP1-206ENST00000508524 ZNF836Q6ZNA1 936 aa2.64□□□□□ -1.99
TOPBP1-206ENST00000508524 RBM43Q6ZSC3 357 aaKnown RBP2.64□□□□□ -1.99
TOPBP1-206ENST00000508524 ZSCAN30Q86W11 494 aa2.64□□□□□ -1.99
TOPBP1-206ENST00000508524 DOLPP1Q86YN1 238 aa2.64□□□□□ -1.99
TOPBP1-206ENST00000508524 CXorf40AQ8TE69 158 aa2.64□□□□□ -1.99
TOPBP1-206ENST00000508524 CA5BP1Q8WTZ4 195 aa2.64□□□□□ -1.99
TOPBP1-206ENST00000508524 PSMF1Q92530 271 aa2.64□□□□□ -1.99
TOPBP1-206ENST00000508524 FRZBQ92765 325 aa2.64□□□□□ -1.99
TOPBP1-206ENST00000508524 BTN2A3PQ96KV6 586 aa2.64□□□□□ -1.99
TOPBP1-206ENST00000508524 RPRD1AQ96P16 312 aaPredicted RBP2.64□□□□□ -1.99
TOPBP1-206ENST00000508524 IFI27L2Q9H2X8 130 aa2.64□□□□□ -1.99
TOPBP1-206ENST00000508524 SLC17A4Q9Y2C5 497 aa2.64□□□□□ -1.99
TOPBP1-206ENST00000508524 SYNJ2BP-COX16A0A087WUM0 186 aa2.63□□□□□ -1.99
TOPBP1-206ENST00000508524 TSPAN11A1L157 253 aa2.63□□□□□ -1.99
TOPBP1-206ENST00000508524 COLCA2A8K830 154 aa2.63□□□□□ -1.99
TOPBP1-206ENST00000508524 RASGRF2O14827 1237 aa2.63□□□□□ -1.99
TOPBP1-206ENST00000508524 PTBP3O95758 552 aaKnown RBP2.63□□□□□ -1.99
TOPBP1-206ENST00000508524 MT-ND3P03897 115 aa2.63□□□□□ -1.99
TOPBP1-206ENST00000508524 RHOCP08134 193 aa2.63□□□□□ -1.99
TOPBP1-206ENST00000508524 CXCL5P42830 114 aa2.63□□□□□ -1.99
TOPBP1-206ENST00000508524 ASMTP46597 345 aa2.63□□□□□ -1.99
TOPBP1-206ENST00000508524 DAP3P51398 398 aaKnown RBP2.63□□□□□ -1.99
TOPBP1-206ENST00000508524 HSD17B7P56937 341 aa2.63□□□□□ -1.99
TOPBP1-206ENST00000508524 SYCP1Q15431 976 aa2.63□□□□□ -1.99
TOPBP1-206ENST00000508524 PYCR3Q53H96 274 aa2.63□□□□□ -1.99
TOPBP1-206ENST00000508524 LY6G6FQ5SQ64 297 aa2.63□□□□□ -1.99
TOPBP1-206ENST00000508524 PLBD1Q6P4A8 553 aa2.63□□□□□ -1.99
TOPBP1-206ENST00000508524 PCP2Q8IVA1 136 aa2.63□□□□□ -1.99
TOPBP1-206ENST00000508524 NELFCDQ8IXH7 590 aa2.63□□□□□ -1.99
TOPBP1-206ENST00000508524 Q8N976 141 aa2.63□□□□□ -1.99
TOPBP1-206ENST00000508524 LILRB4Q8NHJ6 448 aa2.63□□□□□ -1.99
TOPBP1-206ENST00000508524 DTX3LQ8TDB6 740 aa2.63□□□□□ -1.99
TOPBP1-206ENST00000508524 ZNF514Q96K75 400 aaPredicted RBP2.63□□□□□ -1.99
TOPBP1-206ENST00000508524 SERPINB11Q96P15 392 aa2.63□□□□□ -1.99
TOPBP1-206ENST00000508524 TMEM237Q96Q45 408 aa2.63□□□□□ -1.99
TOPBP1-206ENST00000508524 OR2M4Q96R27 311 aa2.63□□□□□ -1.99
TOPBP1-206ENST00000508524 NPAS2Q99743 824 aa2.63□□□□□ -1.99
TOPBP1-206ENST00000508524 ZNF2Q9BSG1 426 aaPredicted RBP2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms